| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003F12 | Sequence | 537 | 004932 (39) | emb|CBI16437.3| | 3e-22 | unnamed protein product [Vitis vinifera] | 634 | 003464 (8) | gb|AAA16093.1| | 1e-88 | lipoxygenase, partial [Cuscuta reflexa] |
| JMFF005I03 | Sequence | 526 | 021641 | gb|ADZ73653.1| | 4e-61 | putative 13-lipoxygenase [Capsicum annuum] | 697 | 003464 (8) | gb|AAA16093.1| | 7e-104 | lipoxygenase, partial [Cuscuta reflexa] |
| JMFS007F01 | Sequence | 457 | 003464 (8) | gb|AAA16093.1| | 3e-87 | lipoxygenase, partial [Cuscuta reflexa] | |||||
| JMFS125C11 | Sequence | 547 | 003464 (8) | gb|AAA16093.1| | 6e-65 | lipoxygenase, partial [Cuscuta reflexa] | |||||
| JMFS129D10 | Sequence | 605 | 003464 (8) | gb|AAA16093.1| | 1e-80 | lipoxygenase, partial [Cuscuta reflexa] | |||||
| JMFS161A10 | Sequence | 599 | 003464 (8) | gb|AAA16093.1| | 2e-93 | lipoxygenase, partial [Cuscuta reflexa] | |||||
| JMSF003N23 | Sequence | 385 | 004932 (39) | 751 | 003464 (8) | gb|AAA16093.1| | 5e-121 | lipoxygenase, partial [Cuscuta reflexa] | |||
| JMSF027G22 | Sequence | 659 | 004932 (39) | gb|KCW51240.1| | 4e-44 | hypothetical protein EUGRSUZ_J008202, partial [Eucalyptus grandis] | 792 | 003464 (8) | gb|AAA16093.1| | 5e-130 | lipoxygenase, partial [Cuscuta reflexa] |
This contig is upended
. : . : . : . : . : . :
JMFS161A10- TCAGTCACTGGTTGAGAACTCACTAGTTGGTGATAGCCAGAGTCA
____________________________________________________________
consensus TCAGTCACTGGTTGAGAACTCACTAGTTGGTGATAGCCAGAGTCA
. : . : . : . : . : . :
JMFS161A10- TGAGCAAGAACATGGGCTTTAGCAACTAGTCAGTCACTGGTTGAGAACTCACTGTGCTAC
____________________________________________________________
consensus TGAGCAAGAACATGGGCTTTAGCAACTAGTCAGTCACTGGTTGAGAACTCACTGTGCTAC
. : . : . : . : . : . :
JMFS161A10- AGAGCCATATATAATTGCAAGTAATCGGCAGCTTAGTGCGGTGCACCCCATTTTCAGACT
____________________________________________________________
consensus AGAGCCATATATAATTGCAAGTAATCGGCAGCTTAGTGCGGTGCACCCCATTTTCAGACT
. : . : . : . : . : . :
JMFS161A10- ATTACAACCTCATTTCCGGTACACCATGGAGATTAATGCCTTGGCGCGTCTAGCTCTTAT
____________________________________________________________
consensus ATTACAACCTCATTTCCGGTACACCATGGAGATTAATGCCTTGGCGCGTCTAGCTCTTAT
. : . : . : . : . : . :
JMFS161A10- CAATGCAAATGGGATTATTGAGGGTGCTTTCTCCCCTGGCAAGTATTCAACGCTGTTGAG
____________________________________________________________
consensus CAATGCAAATGGGATTATTGAGGGTGCTTTCTCCCCTGGCAAGTATTCAACGCTGTTGAG
. : . : . : . : . : . :
JMFS161A10- CTCTATTGCCTATGATCTTGAGTGGCAGTTTGACCTTCAAGCATTGCCAGCAGATCTCAT
____________________________________________________________
consensus CTCTATTGCCTATGATCTTGAGTGGCAGTTTGACCTTCAAGCATTGCCAGCAGATCTCAT
. : . : . : . : . : . :
JMFS161A10- TAGCAGGGGATTGGCAGAGAAGGATCCCACAGCTCCCCATGGCCTGAAACTGGCCATTGA
JMFS007F01- CATGGCCTGAAACTGGCCATTGA
____________________________________________________________
consensus TAGCAGGGGATTGGCAGAGAAGGATCCCACAGCTCCCCATGGCCTGAAACTGGCCATTGA
. : . : . : . : . : . :
JMFS161A10- AGACTACCCTTTTGCCAATGATGGATTAGACCTTTGGGACATCATTAAAGAATGGGTGAC
JMFS007F01- AGACTACCCTTTTGCCAATGATGGATTAGACCTTTGGGACATCATTAAAGAATGGGTGAC
rJMSF003N23+ AAGAATGGGTGAC
rJMSF027G22+ CTTTTGCCAATGATGGATTAGACCTTTGGGACATCATTAAAGAATGGGTGAC
____________________________________________________________
consensus AGACTACCCTTTTGCCAATGATGGATTAGACCTTTGGGACATCATTAAAGAATGGGTGAC
. : . : . : . : . : . :
JMFS161A10- GGATTATGTGACCCACTACTATCCAGAAGCCAGTCTCATAGGATCTGATACAGAACTCCA
JMFS007F01- GGATTATGTGACCCACTACTATCCAGAAGCCAGTCTCATAGGATCTGATACAGAACTCCA
rJMSF003N23+ GGATTATGTGACCCACTACTATCCAGAAGCCAGTCTCATAGGATCTGATACAGAACTCCA
rJMSF027G22+ GGATTATGTGACCCACTACTATCCAGAAGCCAGTCTCATAGGATCTGATACAGAACTCCA
____________________________________________________________
consensus GGATTATGTGACCCACTACTATCCAGAAGCCAGTCTCATAGGATCTGATACAGAACTCCA
. : . : . : . : . : . :
JMFS161A10- AGCTTGGTGGACAGAAATCAGAACAGTTGGCCACGCGGACAAGAAGGATTCGCCAGGCTG
JMFS007F01- AGCTTGGTGGACAGAAATCAGAACAGTTGGCCACGCGGACAAGAAGGATTCGCCAGGCTG
rJMSF003N23+ AGCTTGGTGGACAGAAATCAGAACAGTTGGCCACGCGGACAAGAAGGATTCGCCAGGCTG
rJMSF027G22+ AGCTTGGTGGACAGAAATCAGAACAGTTGGCCACGCGGACAAGAAGGATTCGCCAGGCTG
rJMFF005I03+ GGTGGACAGAAATCAGAACAGTTGGCCACGCGGACAAGAAGGATTCGCCAGGCTG
____________________________________________________________
consensus AGCTTGGTGGACAGAAATCAGAACAGTTGGCCACGCGGACAAGAAGGATTCGCCAGGCTG
. : . : . : . : . : . :
JMFS161A10- GCCGGATCTGAAAA
JMFS007F01- GCCGGATCTGAAAACCCCAGATGACCTGATTGGAATCCTGACAACCATAATGTGGGTGTG
rJMSF003N23+ GCCGGATCTGAAAACCCCAGATGACCTGATTGGAATCCTGACAACCATAATGTGGGTGTG
rJMSF027G22+ GCCGGATCTGAAAACCCCAGATGACCTGATTGGAATCCTGACAACCATAATGTGGGTGTG
rJMFF003F12+ CCCCAGATGACCTGATTGGAATCCTGACAACCATAATGTGGGTGTG
rJMFF005I03+ GCCGGATCTGAAAACCCCAGATGACCTGATTGGAATCCTGACAACCATAATGTGGGTGTG
JMFS129D10- TGGGTGTG
____________________________________________________________
consensus GCCGGATCTGAAAACCCCAGATGACCTGATTGGAATCCTGACAACCATAATGTGGGTGTG
. : . : . : . : . : . :
JMFS007F01- TTCAGGGCACCATGCAGCCGTGAACTTTGGTCAGTACCTCTATGCAGGGTTCTTCCCAAA
rJMSF003N23+ TTCAGGGCACCATGCAGCCGTGAACTTTGGTCAGTACCTCTATGCAGGGTTCTTCCCAAA
rJMSF027G22+ TTCAGGGCACCATGCAGCCGTGAACTTTGGTCAGTACCTCTATGCAGGGTTCTTCCCAAA
rJMFF003F12+ TTCAGGGCACCATGCAGCCGTGAACTTTGGTCAGTACCTCTATGCAGGGTTCTTCCCAAA
rJMFF005I03+ TTCAGGGCACCATGCAGCCGTGAACTTTGGTCAGTACCTCTATGCAGGGTTCTTCCCAAA
JMFS129D10- TTCAGGGCACCATGCAGCCGTGAACTTTGGTCAGTACCTCTATGCAGGGTTCTTCCCAAA
JMFS125C11+ TCCCAAA
____________________________________________________________
consensus TTCAGGGCACCATGCAGCCGTGAACTTTGGTCAGTACCTCTATGCAGGGTTCTTCCCAAA
. : . : . : . : . : . :
JMFS007F01- CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
rJMSF003N23+ CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
rJMSF027G22+ CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
rJMFF003F12+ CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
rJMFF005I03+ CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
JMFS129D10- CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
JMFS125C11+ CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
____________________________________________________________
consensus CAGGCCGACGATTGCCAGAACCAAAATGCTCACAGATGATGTGACAGAAGAAGAATGGGA
. : . : . : . : . : . :
JMFS007F01- ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
rJMSF003N23+ ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
rJMSF027G22+ ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
rJMFF003F12+ ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
rJMFF005I03+ ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
JMFS129D10- ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
JMFS125C11+ ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
____________________________________________________________
consensus ACATTTCTTGGAGAAGCCTGAGGATGCACTCTTGAGATGCTTCCCTTCACAGATTCAGGC
. : . : . : . : . : . :
JMFS007F01- GACGACAATCATGG
rJMSF003N23+ GACGACAATCATGGCGATTTTGGATGTCTTATCAAACCACTCTCCAGACGAGGAGTATAT
rJMSF027G22+ GACGACAATCATGGCGATTTTGGATGTCTTATCAAACCACTCTCCAGACGAGGAGTATAT
rJMFF003F12+ GACGACAATCATGGCGATTTTGGATGTCTTATCAAACCACTCTCCAGACGAGGAGTATAT
rJMFF005I03+ GACGACAATCATGGCGATTTTGGATGTCTTATCAAACCACTCTCCAGACGAGGAGTATAT
JMFS129D10- GACGACAATCATGGCGATTTTGGATGTCTTATCAAACCACTCTCCAGACGAGGAGTATAT
JMFS125C11+ GACGACAATCATGGCGATTTTGGATGTCTTATCAAACCACTCTCCAGACGAGGAGTATAT
____________________________________________________________
consensus GACGACAATCATGGCGATTTTGGATGTCTTATCAAACCACTCTCCAGACGAGGAGTATAT
. : . : . : . : . : . :
rJMSF003N23+ AGGGGCGGCACCAGAACCCTACTGGGTTGAAGACCCTATTATCAATGCTGCATTTGAACG
rJMSF027G22+ AGGGGCGGCACCAGAACCCTACTGGGTTGAAGACCCTATTATCAATGCTGCATTTGAACG
rJMFF003F12+ AGGGGCGGCACCAGAACCCTACTGGGTTGAAGACCCTATTATCAATGCTGCATTTGAACG
rJMFF005I03+ AGGGGCGGCACCAGAACCCTACTGGGTTGAAGACCCTATTATCAATGCTGCATTTGAACG
JMFS129D10- AGGGGCGGCACCAGAACCCTACTGGGTTGAAGACCCTATTATCAATGCTGCATTTGAACG
JMFS125C11+ AGGGGCGGCACCAGAACCCTACTGGGTTGAAGACCCTATTATCAATGCTGCATTTGAACG
____________________________________________________________
consensus AGGGGCGGCACCAGAACCCTACTGGGTTGAAGACCCTATTATCAATGCTGCATTTGAACG
. : . : . : . : . : . :
rJMSF003N23+ GTTTAGTGGGAGATTGAAGGAGCTTGAAGGAATTATTGATGCCCGCAATGCTGACAGGAA
rJMSF027G22+ GTTTAGTGGGAGATTGAAGGAGCTTGAAGGAATTATTGATGCCCGCAATGCTGACAGGAA
rJMFF003F12+ GTTTAGTGGGAGATTGAAGGAGCTTGAAGGAATTATTGATGCCCGCAATGCTGACAGGAA
rJMFF005I03+ GTTTAGTGGGAGATTGAAGGAGCTTGAAGGAATTATTGATGCCCGCAATGCTGACAGGAA
JMFS129D10- GTTTAGTGGGAGATTGAAGGAGCTTGAAGGAATTATTGATGCCCGCAATGCTGACAGGAA
JMFS125C11+ GTTTAGTGGGAGATTGAAGGAGCTTGAAGGAATTATTGATGCCCGCAATGCTGACAGGAA
____________________________________________________________
consensus GTTTAGTGGGAGATTGAAGGAGCTTGAAGGAATTATTGATGCCCGCAATGCTGACAGGAA
. : . : . : . : . : . :
rJMSF003N23+ TCTGAGGAATAGAAGTGGAGCTGGAATCTTGCCTTATGAGCTTATTAAGCCATATTCAGG
rJMSF027G22+ TCTGAGGAATAGAAGTGGAGCTGGAATCTTGCCTTATGAGCTTATTAAGCCATATTCAGG
rJMFF003F12+ TCTGAGGAATAGAAGTGGAGCTGGAATCTTGCCTTATGAGCTTATTAAGCCATATTCAGG
rJMFF005I03+ TCTGAGGAATAGAAGTGGAGCTGGAATCTTGCCTTATGAGCTTATTAAGCCATATTCAGG
JMFS129D10- TCTGAGGAATAGAAGTGGAGCTGGAATCTTGCCTTATGAGCTTATTAAGCCATATTCAGG
JMFS125C11+ TCTGAGGAATAGAAGTGGAGCTGGAATCTTGCCTTATGAGCTTATTAAGCCATATTCAGG
____________________________________________________________
consensus TCTGAGGAATAGAAGTGGAGCTGGAATCTTGCCTTATGAGCTTATTAAGCCATATTCAGG
. : . : . : . : . : . :
rJMSF003N23+ ACCTGGCGTAACTGGTAAAGGTGTACCAAATAGCATCTCCATTTGAGCTAGAAATGTAGG
rJMSF027G22+ ACCTGGCGTAACTGGTAAAGGTGTACCAAATAGCATCTCCATTTGAGCTAGAAATGTAGG
rJMFF003F12+ ACCTGGCGTAACTGGTAAAGGTGTACCAAATAGCATCTCCATTTGAGCTAGAAATGTAGG
rJMFF005I03+ ACCTGGCGTAACTGGTAAAGGTGTACCAAATAGCATCTCCATTTGAGCTAGAAATGTAGG
JMFS129D10- ACCTGGCGTAACTGGTAAAGGTGTACCAAATAGCATCTCCATTTGAGCTAGAAATGTAGG
JMFS125C11+ ACCTGGCGTAACTGGTAAAGGTGTACCAAATAGCATCTCCATTTGAGCTAGAAATGTAGG
____________________________________________________________
consensus ACCTGGCGTAACTGGTAAAGGTGTACCAAATAGCATCTCCATTTGAGCTAGAAATGTAGG
. : . : . : . : . : . :
rJMSF003N23+ GATAGTAGAACTGAAGAATAAAGAATCTAAGAAGGCTCAGTTCCTTTGTTGTATGCCAAT
rJMSF027G22+ GATAGTAGAACTGAAGAATAAAGAATCTAAGAAGGCTCAGTTCCTTTGTTGTATGCCAAT
rJMFF003F12+ GATAGTAGAACTGAAGAATAAAGAATCTAAGAAGGCTCAGTTCCTTTGTTGTATGCCAAT
rJMFF005I03+ GATAGTAGAACTGAAGAATAAAGAATCTAAGAAGGCTCAGTTCCTTTGTTGTATGCCAAT
JMFS129D10- GATAGTAGAACTGAAGAATAAAGAATCTAAGAAGGCTCAGTTCCTTTGTTGTATGCCAAT
JMFS125C11+ GATAGTAGAACTGAAGAATAAAGAATCTAAGAAGGCTCAGTTCCTTTGTTGTATGCCAAT
____________________________________________________________
consensus GATAGTAGAACTGAAGAATAAAGAATCTAAGAAGGCTCAGTTCCTTTGTTGTATGCCAAT
. : . : . : . : . : . :
rJMSF003N23+ GTAATTTGAGTGTGTGCT
rJMSF027G22+ GTAATTTGAGTGTGTGCT
rJMFF003F12+ GTAATTTGAGTGTGTGCTTCTCTGAAACTGCTAA
rJMFF005I03+ GTAATTTGAGTGTGTGCTTCTCTGAAACTGCTAA
JMFS129D10- GTAATTTGAGTGTGTGCTTCTCTGAAACTGCTAATGAAAAGCCTTTCAAGATTTACC
JMFS125C11+ GTAATTTGAGTGTGTGCTTCTCTGAAACTGCTAATGAAAAGCCTTTCAAGATTTACCCAG
____________________________________________________________
consensus GTAATTTGAGTGTGTGCTTCTCTGAAACTGCTAATGAAAAGCCTTTCAAGATTTACCCAG