| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS027B11 | Sequence | 593 | 003463 (9) | dbj|BAK19067.1| | 9e-88 | GIGANTEA [Ipomoea nil] | |||||
| JMFS034G03 | Sequence | 609 | 003463 (9) | ref|XP_009610493.1| | 4e-98 | PREDICTED: protein GIGANTEA-like [Nicotiana tomentosiformis] ref|XP_009610494.1| | |||||
| JMFS067H02 | Sequence | 627 | 003463 (9) | ref|XP_009610493.1| | 1e-100 | PREDICTED: protein GIGANTEA-like [Nicotiana tomentosiformis] ref|XP_009610494.1| | |||||
| JMFS101C01 | Sequence | 627 | 003463 (9) | ref|XP_009610493.1| | 9e-99 | PREDICTED: protein GIGANTEA-like [Nicotiana tomentosiformis] ref|XP_009610494.1| | |||||
| JMFS104G02 | Sequence | 561 | 003463 (9) | emb|CBI22760.3| | 3e-92 | unnamed protein product [Vitis vinifera] | |||||
| JMFS124G08 | Sequence | 570 | 003463 (9) | emb|CBI22760.3| | 5e-86 | unnamed protein product [Vitis vinifera] | |||||
| JMFS135E12 | Sequence | 602 | 003463 (9) | dbj|BAK19067.1| | 3e-90 | GIGANTEA [Ipomoea nil] | |||||
| JMFS159D02 | Sequence | 571 | 003463 (9) | emb|CBI22760.3| | 2e-86 | unnamed protein product [Vitis vinifera] | |||||
| JMSF003K20 | Sequence | 366 | 003463 (9) | gb|AII99806.1| | 9e-33 | gigantea [Dimocarpus longan] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS104G02+ GCTG
JMFS135E12+ ACTCGTTGAAGCATGAGAGCTGCTG
____________________________________________________________
consensus ACTCGTTGAAGCATGAGAGCTGCTG
. : . : . : . : . : . :
JMFS034G03+ CTTCTATCGGCTTCACAGTCTTGTCTTTCAACTTTATAAACCGGGCGGTTGTAATGG
JMFS027B11+ AGTCTTGTCTTTCAACTTTATAAACCGGGCGGTTGTAATGG
JMFS101C01+ CTTCTATCGGCTTCACAGTCTTGTCTTTCAACTTTATAAACCGGGCGGTTGTAATGG
JMFS067H02+ CTTCTATCGGCTTCACAGTCTTGTCTTTCAACTTTATAAACCGGGCGGTTGTAATGG
JMFS104G02+ CTGCTTCTATCGGCTTCACAGTCTTGTCTTTCAACTTTATAAACCGGGCGGTTGTAATGG
JMFS135E12+ CTGCTTCTATCGGCTTCACAGTCTTGTCTTTCAACTTTATAAACCGGGCGGTTGTAATGG
JMFS159D02+ TTCAACTTTATAAACCGGGCGGTTGTAATGG
JMFS124G08+ TCAACTTTATAAACCGGGCGGTTGTAATGG
____________________________________________________________
consensus CTGCTTCTATCGGCTTCACAGTCTTGTCTTTCAACTTTATAAACCGGGCGGTTGTAATGG
. : . : . : . : . : . :
JMFS034G03+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
JMFS027B11+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
JMFS101C01+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
JMFS067H02+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
JMFS104G02+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
JMFS135E12+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
JMFS159D02+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
JMFS124G08+ GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
____________________________________________________________
consensus GTTAGAATACGTAAAATCTCTCCACATGCAAGAGCCCATTGTTCAGAATACTCATTCTCA
. : . : . : . : . : . :
JMFS034G03+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
JMFS027B11+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
JMFS101C01+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
JMFS067H02+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
JMFS104G02+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
JMFS135E12+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
JMFS159D02+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
JMFS124G08+ TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
____________________________________________________________
consensus TTGCTAGGGCAGACCAAAGAAATGAAAGAAGTGAAAGGTGGACTACTTTTATCGTATTCC
. : . : . : . : . : . :
JMFS034G03+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
JMFS027B11+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
JMFS101C01+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
JMFS067H02+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
JMFS104G02+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
JMFS135E12+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
JMFS159D02+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
JMFS124G08+ ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
____________________________________________________________
consensus ATTGTACCATCAATGATACATGAAATAATTGGATGAATGACAGCATGCCCATGCTCTGGA
. : . : . : . : . : . :
JMFS034G03+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMFS027B11+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMSF003K20+ TCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMFS101C01+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMFS067H02+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMFS104G02+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMFS135E12+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMFS159D02+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
JMFS124G08+ TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
____________________________________________________________
consensus TGATGAAGAACAAATCTTGCTAAAACATCATCAAAAAGTCGGTTTTCCTTAGATGGATAG
. : . : . : . : . : . :
JMFS034G03+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMFS027B11+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMSF003K20+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMFS101C01+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMFS067H02+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMFS104G02+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMFS135E12+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMFS159D02+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
JMFS124G08+ TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
____________________________________________________________
consensus TGGTTCCGGATCAGCTCGGCTATATCTTCAGGAAACTGCTCTGATGTAAACTGACCAAAA
. : . : . : . : . : . :
JMFS034G03+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMFS027B11+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMSF003K20+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMFS101C01+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMFS067H02+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMFS104G02+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMFS135E12+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMFS159D02+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
JMFS124G08+ TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
____________________________________________________________
consensus TATTCAACATATGCAGTAGTTTGAGCCTTCCGTTGAAGAACATCTTGTGGGGGAGGCCAA
. : . : . : . : . : . :
JMFS034G03+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
JMFS027B11+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCA
JMSF003K20+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCA
JMFS101C01+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
JMFS067H02+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
JMFS104G02+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
JMFS135E12+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
JMFS159D02+ AATACCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
JMFS124G08+ AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
____________________________________________________________
consensus AATAGCGAGGAGAACTGAAGACGATCTATCCACCTTTCAGACGAGGTAGCCATTTAACTG
. : . : . : . : . : . :
JMFS034G03+ ATAGATTTGGAGTGTCGAGGGAAAACGTT
JMFS101C01+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGA
JMFS067H02+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTT
JMFS104G02+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGATCTATGTTT
JMFS135E12+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGATCTATGTTT
JMFS159D02+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGATCTATGTTT
JMFS124G08+ ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGATCTATGTTT
____________________________________________________________
consensus ATAGATTTGGAGTGTCGAGGGAAAACGTTTGGTGAAAATTAGTGTCTTTGATCTATGTTT
. : . : . : . : . : . :
JMFS104G02+ CCGGTGAGTGTAAATGA
JMFS135E12+ CCGGTGAGTGTAAATGAGAGATTTTGCAAAGATATTT
JMFS159D02+ CCGGTGAGTGTAAATGAGAGATTTTGCAGAGATATTTGGGTGGAGAGAGGGTAGAGAGAG
JMFS124G08+ CCGGTGAGTGTAAATGAGAGATTTTGCAAAGATATTTGGGTGGAGAGAGGGTAGAGAGAG
____________________________________________________________
consensus CCGGTGAGTGTAAATGAGAGATTTTGCAAAGATATTTGGGTGGAGAGAGGGTAGAGAGAG