Contig 003460:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS121B10Sequence590003460 (2)ref|XP_009605957.1|2e-119PREDICTED: coatomer subunit gamma [Nicotiana tomentosiformis]
JMFS148H03Sequence640003460 (2)ref|XP_009800885.1|9e-129PREDICTED: coatomer subunit gamma-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS148H03+ GTTTTTCATATGCATCAAGCATTGAAGTGGGGCCAGCAGC
                      ____________________________________________________________
consensus GTTTTTCATATGCATCAAGCATTGAAGTGGGGCCAGCAGC
 
. : . : . : . : . : . :
JMFS148H03+ AGGAGCAGACAGAGCAGTGGGCTTTTTGCCTGGAGCTTTCTTTTCTGCCATGAGTTGAGA
JMFS121B10+ AGAGCAGTGGGCTTTNTGCCTGGAGCTTTCTTTTCTGCCATGAGTTGAGA
                      ____________________________________________________________
consensus AGGAGCAGACAGAGCAGTGGGCTTTTTGCCTGGAGCTTTCTTTTCTGCCATGAGTTGAGA
 
. : . : . : . : . : . :
JMFS148H03+ CTTAAGCTCCTTTGGTACAGAATTGATATCAAAAGGCTGTTCTGAGGGATCATAGTTATT
JMFS121B10+ CTTAAGCTCCTTTGGTACAGAATTGATATCAAAAGGCTGTTCTGAGGGATCATAGTTATT
                      ____________________________________________________________
consensus CTTAAGCTCCTTTGGTACAGAATTGATATCAAAAGGCTGTTCTGAGGGATCATAGTTATT
 
. : . : . : . : . : . :
JMFS148H03+ CAAACTGATCTCCAGATTTGCTAATGGGACACCAAGAGATCCAAATAAAAACTCCTTTGC
JMFS121B10+ CAAACTGATCTCCAGATTTGCTAATGGGACACCAAGAGATCCAAATAAAAACTCCTTTGC
                      ____________________________________________________________
consensus CAAACTGATCTCCAGATTTGCTAATGGGACACCAAGAGATCCAAATAAAAACTCCTTTGC
 
. : . : . : . : . : . :
JMFS148H03+ CTCTTCAGCAGTTTCAACAACTGCACCATCACCTCCTAGGGTGTTCAAGTAAAGTGTTGC
JMFS121B10+ CTCTTCAGCAGTTTCAACAACTGCACCATCACCTCCTAGGGTGTTCAAGTAAAGTGTTGC
                      ____________________________________________________________
consensus CTCTTCAGCAGTTTCAACAACTGCACCATCACCTCCTAGGGTGTTCAAGTAAAGTGTTGC
 
. : . : . : . : . : . :
JMFS148H03+ CCTATCACGAACCTCATCATCATTGTCAAATAGACAGCGTTTCAACAGAACAAAGATGCG
JMFS121B10+ CCTATCACGAACCTCATCATCATTGTCAAATAGACAGCGTTTCAACAGAACAAAGATGCG
                      ____________________________________________________________
consensus CCTATCACGAACCTCATCATCATTGTCAAATAGACAGCGTTTCAACAGAACAAAGATGCG
 
. : . : . : . : . : . :
JMFS148H03+ AGGCTTCAAAGAGTCTACCATGGCTCCAAACTTTGCTAATGTACTCACAGCACTAGCCCG
JMFS121B10+ AGGCTTCAAAGAGTCTACCATGGCTCCAAACTTTGCTAATGTACTCACAGCACTAGCCCG
                      ____________________________________________________________
consensus AGGCTTCAAAGAGTCTACCATGGCTCCAAACTTTGCTAATGTACTCACAGCACTAGCCCG
 
. : . : . : . : . : . :
JMFS148H03+ AACTGTTGCATTTTCAAGTATGATCCGATTATAGATGTACCGGATGTACTTGCTGGGATC
JMFS121B10+ AACTGTTGCATTTTCAAGTATGATCCGATTATAGATGTACCGGATGTACTTGCTGGGATC
                      ____________________________________________________________
consensus AACTGTTGCATTTTCAAGTATGATCCGATTATAGATGTACCGGATGTACTTGCTGGGATC
 
. : . : . : . : . : . :
JMFS148H03+ TGCAGTCTTAGGTCCTTCATTTCCCAGAAAGTGAAGTATCTGAGTAGAAAGATATGTAAA
JMFS121B10+ TGCAGTCTTAGGTCCTTCATTTCCCAGAAAGTGAAGTATCTGAGTAGAAAGATATGTAAA
                      ____________________________________________________________
consensus TGCAGTCTTAGGTCCTTCATTTCCCAGAAAGTGAAGTATCTGAGTAGAAAGATATGTAAA
 
. : . : . : . : . : . :
JMFS148H03+ TTCACAATCTTCAATAAATTCACATAAATGAAGCAGCCCACTTTCTTTAGCATCGGGAAT
JMFS121B10+ TTCACAATCTTCAATAAATTCACATAAATGAAGCAGCCCACTTTCTTTAGCATCGGGAAT
                      ____________________________________________________________
consensus TTCACAATCTTCAATAAATTCACATAAATGAAGCAGCCCACTTTCTTTAGCATCGGGAAT
 
. : . : . : . : . : . :
JMFS148H03+ ATCTCGTATGAGGATCACAATTGAATCAACAATAGCTTTCTTGAACTCGAACCCACCTTC
JMFS121B10+ ATCTCGTATGAGGATCACAATTGAATCAACAATAGCTTTCTTGAACTCGAACCCACCTTC
                      ____________________________________________________________
consensus ATCTCGTATGAGGATCACAATTGAATCAACAATAGCTTTCTTGAACTCGAACCCACCTTC