Contig 003459:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS019H01Sequence525003459 (13)ref|XP_004239889.1|1e-84PREDICTED: squamosa promoter-binding-like protein 1 [Solanum lycopersicum]
JMFS050E10Sequence107003459 (13)
JMFS073G03Sequence617003459 (13)
JMFS090B10Sequence590003459 (13)
JMFS093H01Sequence296003459 (13)
JMFS104F12Sequence642003459 (13)
JMFS110E04Sequence457003459 (13)ref|XP_011019016.1|2e-05PREDICTED: squamosa promoter-binding-like protein 1 [Populus euphratica]
JMFS111C05Sequence620003459 (13)emb|CDO98702.1|1e-73unnamed protein product [Coffea canephora]
JMFS119F12Sequence619003459 (13)
JMFS123D04Sequence577003459 (13)
JMFS145C01Sequence613003459 (13)ref|XP_004239889.1|8e-85PREDICTED: squamosa promoter-binding-like protein 1 [Solanum lycopersicum]
JMFS145H10Sequence618003459 (13)
JMSF041E11Sequence669003459 (13)emb|CDO98702.1|2e-69unnamed protein product [Coffea canephora]620001960 (4)ref|XP_004239889.1|3e-54PREDICTED: squamosa promoter-binding-like protein 1 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS019H01+ GCCCGCATTATGCAGATCNTGAGATATAGGTAATGGCCCAGACGGGTTCCTTTCATCA
                      ____________________________________________________________
consensus GCCCGCATTATGCAGATCNTGAGATATAGGTAATGGCCCAGACGGGTTCCTTTCATCA
 
. : . : . : . : . : . :
JMFS019H01+ TTTGAGCCAGCCATACTGGCTAGGTTTCTCAATAGATGAGACAGAATATCCTGATCCTTC
JMFS145C01+ AGGTTTCTCAATAGATGAGACAGAATATCCTGATCCTTC
                      ____________________________________________________________
consensus TTTGAGCCAGCCATACTGGCTAGGTTTCTCAATAGATGAGACAGAATATCCTGATCCTTC
 
. : . : . : . : . : . :
JMFS019H01+ GTTTGGTCAGAGCTATTTGTTGCACCATGCATATTTGCTAGTATCTTTAGCAGACTAATT
JMFS145C01+ GTTTGGTCAGAGCTATTTGTTGCACCATGCATATTTGCTAGTATCTTTAGCAGACTAATT
                      ____________________________________________________________
consensus GTTTGGTCAGAGCTATTTGTTGCACCATGCATATTTGCTAGTATCTTTAGCAGACTAATT
 
. : . : . : . : . : . :
JMFS019H01+ AATAAATAATTAGTTCCCCGTTCATCATTCATGGGGGCTCCATTAGGTACATTTTCTGGA
JMFS145C01+ AATAAATAATTAGTTCCCCGTTCATCATTCATGGGGGCTCCATTAGGTACATTTTCTGGA
                      ____________________________________________________________
consensus AATAAATAATTAGTTCCCCGTTCATCATTCATGGGGGCTCCATTAGGTACATTTTCTGGA
 
. : . : . : . : . : . :
JMFS019H01+ TGTGTCTTTCTTCTCCGACTGTTGTGTCCAGCTAAGCGCCTACGACAACTTCGTTTCCCC
JMFS145C01+ TGTGTCTTTCTTCTCCGACTGTTGTGTCCAGCTAAGCGCCTACGACAACTTCGTTTCCCC
JMSF041E11+ GTTTCCCN
                      ____________________________________________________________
consensus TGTGTCTTTCTTCTCCGACTGTTGTGTCCAGCTAAGCGCCTACGACAACTTCGTTTCCCC
 
. : . : . : . : . : . :
JMFS019H01+ TCATCAAACTCTTGAAGAACATGAAATCTGCTACACTGCTGACAGAATCGCTGCATGGCA
JMFS145C01+ TCATCAAACTCTTGAAGAACATGAAATCTGCTACACTGCTGACAGAATCGCTGCATGGCA
JMSF041E11+ TCATCAAACTNTTGAAGAACATGAAATNTGNTACANTG-TGACAGAATCGNTGCATGGCA
JMFS111C05+ TGACAGAATCGCTGCATGGCA
                      ____________________________________________________________
consensus TCATCAAACTCTTGAAGAACATGAAATCTGCTACACTGCTGACAGAATCGCTGCATGGCA
 
. : . : . : . : . : . :
JMFS019H01+ TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
JMFS145C01+ TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
JMSF041E11+ TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
JMFS111C05+ TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
                      ____________________________________________________________
consensus TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
 
. : . : . : . : . : . :
JMFS019H01+ TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCAATTGGCAAACCGCACGGTTA
JMFS145C01+ TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCACTTGGCAAACCGCACGGTTA
JMSF041E11+ TAATCTTTAGAATTGGTCAAGTCCATTGGACAGTCCTCCACTTGGCAAACCGCACGGTTA
JMFS111C05+ TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCACTTGGCAAACCGCACGGTTA
                      ____________________________________________________________
consensus TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCACTTGGCAAACCGCACGGTTA
 
. : . : . : . : . : . :
JMFS019H01+ GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCC
JMFS145C01+ GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
JMSF041E11+ GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
JMFS111C05+ GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
                      ____________________________________________________________
consensus GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
 
. : . : . : . : . : . :
JMFS145C01+ CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
JMSF041E11+ CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
JMFS111C05+ CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
                      ____________________________________________________________
consensus CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
 
. : . : . : . : . : . :
JMFS145C01+ AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
JMSF041E11+ AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
JMFS111C05+ AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
                      ____________________________________________________________
consensus AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
 
. : . : . : . : . : . :
JMFS145C01+ TCATTTAACACTACTACTTCATCAGAACCATTGG
JMSF041E11+ TCATTTAACACTACTACTTCATCAGAACCATTGGGAACTCCATTATTCGCCGGAATCTGA
JMFS111C05+ TCATTTAACACTACTACTTCATCAGAACCATTGGGAACTCCATTATTCGCCGGAATCTGA
                      ____________________________________________________________
consensus TCATTTAACACTACTACTTCATCAGAACCATTGGGAACTCCATTATTCGCCGGAATCTGA
 
. : . : . : . : . : . :
JMSF041E11+ GATTCATCAGGGAATAACTGTCTACTTCTACAATCTGATGGGATGCAATTCATGGGAACT
JMFS111C05+ GATTCATCAGGGAATAACTGTCTACTTCTACAATCTGATGGGATGCAATTCATGGGAACT
                      ____________________________________________________________
consensus GATTCATCAGGGAATAACTGTCTACTTCTACAATCTGATGGGATGCAATTCATGGGAACT
 
. : . : . : . : . : . :
JMSF041E11+ GCCGAGAACAGATCACCATCCCATTTCCAATCATTCAAGTCCCACTCCATACTCCTTTTT
JMFS111C05+ GCCGAGAACAGATCACCATCCCATTTCCAATCATTCAAGTCCCACTCCATACTCCTTTTT
JMFS110E04+ AATCATTCAAGTCACACTCCATACTCCTTTTT
                      ____________________________________________________________
consensus GCCGAGAACAGATCACCATCCCATTTCCAATCATTCAAGTCCCACTCCATACTCCTTTTT
 
. : . : . : . : . : . :
JMSF041E11+ CCTACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
JMFS111C05+ CCTACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
JMFS110E04+ CATACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
                      ____________________________________________________________
consensus CCTACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
 
. : . : . : . : . : . :
JMSF041E11+ CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATC
JMFS111C05+ CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATC
JMFS093H01+ CAAATCCACAACTTTTCGT
JMFS110E04+ CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATCCACAACTTTTCCT
                      ____________________________________________________________
consensus CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATCCACAACTTTTCGT
 
. : . : . : . : . : . :
JMFS093H01+ CAATAATAAAACCAGATAAACAAACCCAATAGACCGCAAGACAAAATTCCCCCAAAAAAA
JMFS110E04+ CAATAATAAAACCAGATAAACAAACCCAATAGACCGCAAGACAAAATTCCCCCAAAAAAA
JMFS123D04+ CCCCAAAAAAA
JMFS104F12+ ATAATAAAACCAGATAAACAAACCCAATAGACCACAAGACAAAATTCCCCCAAAAAAA
JMFS073G03+ AAGACAAAATTCCCCCAAAAAAA
JMFS090B10+ CCCCAAAAAAA
JMFS145H10+ AAAATTCCCCCAAAANAA
JMFS119F12+ AGACAAAATTCCCCCAAAAAAA
                      ____________________________________________________________
consensus CAATAATAAAACCAGATAAACAAACCCAATAGACCGCAAGACAAAATTCCCCCAAAAAAA
 
. : . : . : . : . : . :
JMFS093H01+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS110E04+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS123D04+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS104F12+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS073G03+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS090B10+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS145H10+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS119F12+ TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
                      ____________________________________________________________
consensus TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
 
. : . : . : . : . : . :
JMFS093H01+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS110E04+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS123D04+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS104F12+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS073G03+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS090B10+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS145H10+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS119F12+ CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
                      ____________________________________________________________
consensus CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
 
. : . : . : . : . : . :
JMFS093H01+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS110E04+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS123D04+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS104F12+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS073G03+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS090B10+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS145H10+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS119F12+ ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
                      ____________________________________________________________
consensus ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
 
. : . : . : . : . : . :
JMFS093H01+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATT
JMFS110E04+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS123D04+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS104F12+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS073G03+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS090B10+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS145H10+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS119F12+ TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
                      ____________________________________________________________
consensus TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
 
. : . : . : . : . : . :
JMFS110E04+ TTTCC
JMFS123D04+ TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS104F12+ TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS073G03+ TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS090B10+ TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS145H10+ TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS119F12+ TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
                      ____________________________________________________________
consensus TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
 
. : . : . : . : . : . :
JMFS123D04+ GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS104F12+ GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS073G03+ GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS090B10+ GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS145H10+ GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS119F12+ GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
                      ____________________________________________________________
consensus GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
 
. : . : . : . : . : . :
JMFS123D04+ ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGCCAACAAAC
JMFS104F12+ ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
JMFS073G03+ ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
JMFS090B10+ ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
JMFS145H10+ ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACACCAAAC
JMFS119F12+ ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
                      ____________________________________________________________
consensus ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
 
. : . : . : . : . : . :
JMFS123D04+ CAAAAAAAAAAAAAAAA--CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS050E10+ ATTAGAAGATAAGAAGAGAC
JMFS104F12+ CAAAAAAAAAAAAAAAA--CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS073G03+ CAAAAAAAAAAAAAAA--CCAAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS090B10+ CAAAAAAAAAAAAAAA---CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS145H10+ CAAAAAAAAAAAAAAAAACCAAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS119F12+ CAAAAAAAAAAAAAAA---CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
                      ____________________________________________________________
consensus CAAAAAAAAAAAAAAAA--CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
 
. : . : . : . : . : . :
JMFS123D04+ CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS050E10+ CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTG-AGCGCTCCA
JMFS104F12+ CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS073G03+ CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS090B10+ CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS145H10+ CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS119F12+ CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
                      ____________________________________________________________
consensus CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
 
. : . : . : . : . : . :
JMFS123D04+ CGAAAGATCGCCGGCGATATAGAAATTA
JMFS050E10+ CGAAAGATCGCCGGCGATATAGAAATTA
JMFS104F12+ CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAA
JMFS073G03+ CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGA
JMFS090B10+ CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACT
JMFS145H10+ CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGA
JMFS119F12+ CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGAGAGA
                      ____________________________________________________________
consensus CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGAGAGA