Contig 003459:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS019H01Sequence525003459 (13)ref|XP_004239889.1|1e-84PREDICTED: squamosa promoter-binding-like protein 1 [Solanum lycopersicum]
JMFS050E10Sequence107003459 (13)
JMFS073G03Sequence617003459 (13)
JMFS090B10Sequence590003459 (13)
JMFS093H01Sequence296003459 (13)
JMFS104F12Sequence642003459 (13)
JMFS110E04Sequence457003459 (13)ref|XP_011019016.1|2e-05PREDICTED: squamosa promoter-binding-like protein 1 [Populus euphratica]
JMFS111C05Sequence620003459 (13)emb|CDO98702.1|1e-73unnamed protein product [Coffea canephora]
JMFS119F12Sequence619003459 (13)
JMFS123D04Sequence577003459 (13)
JMFS145C01Sequence613003459 (13)ref|XP_004239889.1|8e-85PREDICTED: squamosa promoter-binding-like protein 1 [Solanum lycopersicum]
JMFS145H10Sequence618003459 (13)
JMSF041E11Sequence669003459 (13)emb|CDO98702.1|2e-69unnamed protein product [Coffea canephora]620001960 (4)ref|XP_004239889.1|3e-54PREDICTED: squamosa promoter-binding-like protein 1 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS019H01+             GCCCGCATTATGCAGATCNTGAGATATAGGTAATGGCCCAGACGGGTTCCTTTCATCA
                      ____________________________________________________________
consensus               GCCCGCATTATGCAGATCNTGAGATATAGGTAATGGCCCAGACGGGTTCCTTTCATCA
 
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JMFS019H01+           TTTGAGCCAGCCATACTGGCTAGGTTTCTCAATAGATGAGACAGAATATCCTGATCCTTC
JMFS145C01+                                AGGTTTCTCAATAGATGAGACAGAATATCCTGATCCTTC
                      ____________________________________________________________
consensus             TTTGAGCCAGCCATACTGGCTAGGTTTCTCAATAGATGAGACAGAATATCCTGATCCTTC
 
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JMFS019H01+           GTTTGGTCAGAGCTATTTGTTGCACCATGCATATTTGCTAGTATCTTTAGCAGACTAATT
JMFS145C01+           GTTTGGTCAGAGCTATTTGTTGCACCATGCATATTTGCTAGTATCTTTAGCAGACTAATT
                      ____________________________________________________________
consensus             GTTTGGTCAGAGCTATTTGTTGCACCATGCATATTTGCTAGTATCTTTAGCAGACTAATT
 
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JMFS019H01+           AATAAATAATTAGTTCCCCGTTCATCATTCATGGGGGCTCCATTAGGTACATTTTCTGGA
JMFS145C01+           AATAAATAATTAGTTCCCCGTTCATCATTCATGGGGGCTCCATTAGGTACATTTTCTGGA
                      ____________________________________________________________
consensus             AATAAATAATTAGTTCCCCGTTCATCATTCATGGGGGCTCCATTAGGTACATTTTCTGGA
 
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JMFS019H01+           TGTGTCTTTCTTCTCCGACTGTTGTGTCCAGCTAAGCGCCTACGACAACTTCGTTTCCCC
JMFS145C01+           TGTGTCTTTCTTCTCCGACTGTTGTGTCCAGCTAAGCGCCTACGACAACTTCGTTTCCCC
JMSF041E11+                                                               GTTTCCCN
                      ____________________________________________________________
consensus             TGTGTCTTTCTTCTCCGACTGTTGTGTCCAGCTAAGCGCCTACGACAACTTCGTTTCCCC
 
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JMFS019H01+           TCATCAAACTCTTGAAGAACATGAAATCTGCTACACTGCTGACAGAATCGCTGCATGGCA
JMFS145C01+           TCATCAAACTCTTGAAGAACATGAAATCTGCTACACTGCTGACAGAATCGCTGCATGGCA
JMSF041E11+           TCATCAAACTNTTGAAGAACATGAAATNTGNTACANTG-TGACAGAATCGNTGCATGGCA
JMFS111C05+                                                  TGACAGAATCGCTGCATGGCA
                      ____________________________________________________________
consensus             TCATCAAACTCTTGAAGAACATGAAATCTGCTACACTGCTGACAGAATCGCTGCATGGCA
 
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JMFS019H01+           TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
JMFS145C01+           TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
JMSF041E11+           TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
JMFS111C05+           TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
                      ____________________________________________________________
consensus             TTTCCCACCAAAGCTTTGGTGGCCTTAGAATGCACTTCACACACTTTATGTCTCCGGTGA
 
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JMFS019H01+           TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCAATTGGCAAACCGCACGGTTA
JMFS145C01+           TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCACTTGGCAAACCGCACGGTTA
JMSF041E11+           TAATCTTTAGAATTGGTCAAGTCCATTGGACAGTCCTCCACTTGGCAAACCGCACGGTTA
JMFS111C05+           TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCACTTGGCAAACCGCACGGTTA
                      ____________________________________________________________
consensus             TAATCTTTAGAATTGGTCAAGTCCATTTGACAGTCCTCCACTTGGCAAACCGCACGGTTA
 
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JMFS019H01+           GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCC             
JMFS145C01+           GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
JMSF041E11+           GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
JMFS111C05+           GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
                      ____________________________________________________________
consensus             GATGATCCGCCTGCAACTTTTGCCTTTTTCCCGTTCTTTCTTTCCCCCTTTTCCATCTCC
 
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JMFS145C01+           CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
JMSF041E11+           CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
JMFS111C05+           CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
                      ____________________________________________________________
consensus             CCTTCGGTGATGGGGAACACTTGACCACCGAGCTTTAGATTAAGCGAAGCACATTCATTA
 
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JMFS145C01+           AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
JMSF041E11+           AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
JMFS111C05+           AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
                      ____________________________________________________________
consensus             AGGTCTTCCTGCTCAACAACAACTAACCTCCTTCGCTTCTCCATTTCCTTCTTCCCTTTC
 
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JMFS145C01+           TCATTTAACACTACTACTTCATCAGAACCATTGG                          
JMSF041E11+           TCATTTAACACTACTACTTCATCAGAACCATTGGGAACTCCATTATTCGCCGGAATCTGA
JMFS111C05+           TCATTTAACACTACTACTTCATCAGAACCATTGGGAACTCCATTATTCGCCGGAATCTGA
                      ____________________________________________________________
consensus             TCATTTAACACTACTACTTCATCAGAACCATTGGGAACTCCATTATTCGCCGGAATCTGA
 
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JMSF041E11+           GATTCATCAGGGAATAACTGTCTACTTCTACAATCTGATGGGATGCAATTCATGGGAACT
JMFS111C05+           GATTCATCAGGGAATAACTGTCTACTTCTACAATCTGATGGGATGCAATTCATGGGAACT
                      ____________________________________________________________
consensus             GATTCATCAGGGAATAACTGTCTACTTCTACAATCTGATGGGATGCAATTCATGGGAACT
 
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JMSF041E11+           GCCGAGAACAGATCACCATCCCATTTCCAATCATTCAAGTCCCACTCCATACTCCTTTTT
JMFS111C05+           GCCGAGAACAGATCACCATCCCATTTCCAATCATTCAAGTCCCACTCCATACTCCTTTTT
JMFS110E04+                                       AATCATTCAAGTCACACTCCATACTCCTTTTT
                      ____________________________________________________________
consensus             GCCGAGAACAGATCACCATCCCATTTCCAATCATTCAAGTCCCACTCCATACTCCTTTTT
 
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JMSF041E11+           CCTACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
JMFS111C05+           CCTACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
JMFS110E04+           CATACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
                      ____________________________________________________________
consensus             CCTACTGCCTTTAAATCTGGAATAACAGGGCCATACAAATGATGACCCTTCCCTCCAATC
 
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JMSF041E11+           CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATC             
JMFS111C05+           CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATC             
JMFS093H01+                                                    CAAATCCACAACTTTTCGT
JMFS110E04+           CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATCCACAACTTTTCCT
                      ____________________________________________________________
consensus             CTAGATTCCATCGATCAACACTTCTACCAGGTAAATAGCCACAAATCCACAACTTTTCGT
 
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JMFS093H01+           CAATAATAAAACCAGATAAACAAACCCAATAGACCGCAAGACAAAATTCCCCCAAAAAAA
JMFS110E04+           CAATAATAAAACCAGATAAACAAACCCAATAGACCGCAAGACAAAATTCCCCCAAAAAAA
JMFS123D04+                                                            CCCCAAAAAAA
JMFS104F12+             ATAATAAAACCAGATAAACAAACCCAATAGACCACAAGACAAAATTCCCCCAAAAAAA
JMFS073G03+                                                AAGACAAAATTCCCCCAAAAAAA
JMFS090B10+                                                            CCCCAAAAAAA
JMFS145H10+                                                     AAAATTCCCCCAAAANAA
JMFS119F12+                                                 AGACAAAATTCCCCCAAAAAAA
                      ____________________________________________________________
consensus             CAATAATAAAACCAGATAAACAAACCCAATAGACCGCAAGACAAAATTCCCCCAAAAAAA
 
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JMFS093H01+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS110E04+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS123D04+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS104F12+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS073G03+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS090B10+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS145H10+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
JMFS119F12+           TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
                      ____________________________________________________________
consensus             TGAAAAAAGGTTACAATACCATCAAATGGGAAATAGAACAAAACAAGAAACCCAAAATCA
 
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JMFS093H01+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS110E04+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS123D04+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS104F12+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS073G03+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS090B10+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS145H10+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
JMFS119F12+           CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
                      ____________________________________________________________
consensus             CTCAAAGATCAAATTTTTTTACAAAGCCCATACAGGAACTGATCCAATTGAGCTGAAATT
 
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JMFS093H01+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS110E04+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS123D04+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS104F12+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS073G03+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS090B10+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS145H10+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
JMFS119F12+           ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
                      ____________________________________________________________
consensus             ACCTCCTAATCAACCCAAAAACAACCCTAAAAATTGAAGAACACCGCACCGACACATCCA
 
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JMFS093H01+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATT                        
JMFS110E04+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS123D04+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS104F12+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS073G03+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS090B10+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS145H10+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
JMFS119F12+           TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
                      ____________________________________________________________
consensus             TGGAACCAAACAAGAGCTCTACACGTACCCAAAATTTATTCTGATTTAGCTCAACTACAT
 
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JMFS110E04+           TTTCC                                                       
JMFS123D04+           TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS104F12+           TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS073G03+           TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS090B10+           TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS145H10+           TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
JMFS119F12+           TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
                      ____________________________________________________________
consensus             TTTCCCCAAGGCCAAACCTTCTTCAAGCTCTAAAAACTACCCATAAAGCTTCTGCTTTTC
 
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JMFS123D04+           GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS104F12+           GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS073G03+           GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS090B10+           GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS145H10+           GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
JMFS119F12+           GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
                      ____________________________________________________________
consensus             GAACACTGTAGATGTACGGACAACAGTGTCTCTGTATCTACGCAATTTATTCCGCTCTGT
 
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JMFS123D04+           ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGCCAACAAAC
JMFS104F12+           ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
JMFS073G03+           ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
JMFS090B10+           ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
JMFS145H10+           ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACACCAAAC
JMFS119F12+           ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
                      ____________________________________________________________
consensus             ATTTAATTTTACTTGGCTTCAAGCGGACAAGCTCAGTAATTGTAGGAGACGACAACAAAC
 
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JMFS123D04+           CAAAAAAAAAAAAAAAA--CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS050E10+                                                   ATTAGAAGATAAGAAGAGAC
JMFS104F12+           CAAAAAAAAAAAAAAAA--CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS073G03+           CAAAAAAAAAAAAAAA--CCAAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS090B10+           CAAAAAAAAAAAAAAA---CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS145H10+           CAAAAAAAAAAAAAAAAACCAAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
JMFS119F12+           CAAAAAAAAAAAAAAA---CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
                      ____________________________________________________________
consensus             CAAAAAAAAAAAAAAAA--CCAAAAAAAAAAACCCAAAAAATTAGAAGATAAGAAGAGAC
 
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JMFS123D04+           CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS050E10+           CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTG-AGCGCTCCA
JMFS104F12+           CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS073G03+           CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS090B10+           CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS145H10+           CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
JMFS119F12+           CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
                      ____________________________________________________________
consensus             CAAAAAACCTTGCCGAAGCAGTCGGTACCGAGATTTGATCGGAAAACGTGTAGCGCTCCA
 
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JMFS123D04+           CGAAAGATCGCCGGCGATATAGAAATTA                                
JMFS050E10+           CGAAAGATCGCCGGCGATATAGAAATTA                                
JMFS104F12+           CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAA              
JMFS073G03+           CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGA    
JMFS090B10+           CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACT                  
JMFS145H10+           CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGA    
JMFS119F12+           CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGAGAGA
                      ____________________________________________________________
consensus             CGAAAGATCGCCGGCGATATAGAAATTACAGACAACCCAACTAAAAAAATGTTAGAGAGA