Contig 003456:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF028H17-                                     ATTCAAGTGTACACAAATTCGCCTAATTTCACC
                      ____________________________________________________________
consensus                                        ATTCAAGTGTACACAAATTCGCCTAATTTCACC
 
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rJMSF028H17-          AGTCGCAGCATATTTCTTCCCAAAATAAAGCAGCAACCATAAGCTAAGCTAAGCTAAGCT
                      ____________________________________________________________
consensus             AGTCGCAGCATATTTCTTCCCAAAATAAAGCAGCAACCATAAGCTAAGCTAAGCTAAGCT
 
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rJMSF028H17-          GCTACATACTTGGAATAATAGAAGATTATAGATACAACAACCTACACTTGTATTTTCCTT
                      ____________________________________________________________
consensus             GCTACATACTTGGAATAATAGAAGATTATAGATACAACAACCTACACTTGTATTTTCCTT
 
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rJMSF028H17-          CTCTCTGGCCTTGGAATAGTTGGGGGCTTATTATCTCTATGTTTCATGTTATCATCTTCA
                      ____________________________________________________________
consensus             CTCTCTGGCCTTGGAATAGTTGGGGGCTTATTATCTCTATGTTTCATGTTATCATCTTCA
 
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rJMSF028H17-          TCATCATCATCCACATAAATAACACCATCGTCGTCGTCGTCATCATCATCATCATACATT
                      ____________________________________________________________
consensus             TCATCATCATCCACATAAATAACACCATCGTCGTCGTCGTCATCATCATCATCATACATT
 
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rJMSF028H17-          TCTAATTCAGCCTCAATCTCATCATCATCCCATTCATCTCCATCATCATAATCCATGTCC
                      ____________________________________________________________
consensus             TCTAATTCAGCCTCAATCTCATCATCATCCCATTCATCTCCATCATCATAATCCATGTCC
 
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rJMSF028H17-          TCCTCCTCATCATCATCATCATCACCAGCACACATTGTATGGTATTCAGGAGGAGGAGGA
                      ____________________________________________________________
consensus             TCCTCCTCATCATCATCATCATCACCAGCACACATTGTATGGTATTCAGGAGGAGGAGGA
 
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rJMSF028H17-          CAATCCTCTGTTTCTGCCTTGTCTTTCTTCATGACAAGATGTCGAATGACTCTCTCATCT
                      ____________________________________________________________
consensus             CAATCCTCTGTTTCTGCCTTGTCTTTCTTCATGACAAGATGTCGAATGACTCTCTCATCT
 
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rJMSF028H17-          TTGTCAAGCAAGTTCTTGAAATCATTAATCCATTTGGCTTCCATTTCAAAATTCATCAAA
JMSF028H17+              TCAAGCAAGTTCTTGAAATCATTAATCCATTTGGCTTCCATTTCAAAATTCATCAAA
                      ____________________________________________________________
consensus             TTGTCAAGCAAGTTCTTGAAATCATTAATCCATTTGGCTTCCATTTCAAAATTCATCAAA
 
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rJMSF028H17-          ATATAGTGAGCATTGCTTGCTTTTTGTATCTTGTAGGCCAATCTTCGCATACCCCAGTCA
JMSF028H17+           ATATAGTGAGCATTGCTTGCTTTTTGTATCTTGTAGGCCAATCTTCGCATACCCCAGTCA
                      ____________________________________________________________
consensus             ATATAGTGAGCATTGCTTGCTTTTTGTATCTTGTAGGCCAATCTTCGCATACCCCAGTCA
 
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rJMSF028H17-          CTGAATCTCCATACCTTTCCNTTCTTCTCCTCCAAAAATTCTTGAACCATCTTATTCACA
JMSF028H17+           CTGAATCTCCATACCTTTCCTTTCTTCTCCTCCAAAAATTCTTGAACCATCTTATTCACA
                      ____________________________________________________________
consensus             CTGAATCTCCATACCTTTCCTTTCTTCTCCTCCAAAAATTCTTGAACCATCTTATTCACA
 
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rJMSF028H17-          CTCTCTACCTCATCCTTGTGATCTTCGTGAATCAAGTAAACAACCTCGTAGTGNCGCATT
JMSF028H17+           CTCTCTACCTCATCCTTGTGATCTTCGTGAATCAAGTAAACAACCTCGTAGTGCCGCATT
                      ____________________________________________________________
consensus             CTCTCTACCTCATCCTTGTGATCTTCGTGAATCAAGTAAACAACCTCGTAGTGCCGCATT
 
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rJMSF028H17-          CTTTCCACATTTAACTCGCTCTCCAGTCGAA                             
JMSF028H17+           CTTTCCACATTTAACTCGCTCTCCAGTCGAAGATTTAAAGATTCAAAAAGTTCCCGTTCT
                      ____________________________________________________________
consensus             CTTTCCACATTTAACTCGCTCTCCAGTCGAAGATTTAAAGATTCAAAAAGTTCCCGTTCT
 
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JMSF028H17+           TCAGCATCTGCAAACTCGGGCAGAAGCCTACCATCTTCTTTAACCGTTGCCTCTTTAAGG
                      ____________________________________________________________
consensus             TCAGCATCTGCAAACTCGGGCAGAAGCCTACCATCTTCTTTAACCGTTGCCTCTTTAAGG
 
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JMSF028H17+           AGGATAGCTTCAGGAAAAGGACCAGTGGCTTCGTCTGGTCTTGGAACGAAGCTGTGGGTG
                      ____________________________________________________________
consensus             AGGATAGCTTCAGGAAAAGGACCAGTGGCTTCGTCTGGTCTTGGAACGAAGCTGTGGGTG
 
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JMSF028H17+           TCGGCCTTCTTCTTCTTATTTGCAGCCACTATCAGGGAGGAGAATCTCAACTTTCTAGAG
JMFS115A12+                                                           AACTTTCTAGAG
                      ____________________________________________________________
consensus             TCGGCCTTCTTCTTCTTATTTGCAGCCACTATCAGGGAGGAGAATCTCAACTTTCTAGAG
 
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JMSF028H17+           TAAAATGGAAGAGACAAAGAAGAAGGATGGAGATTCACTTTTGCTGAATTGGAATTGGAA
JMFS115A12+           TAAAATGGAAGAGACAAAGAAGAAGGATGGAGATTCACTTTTGCTGAATTGGAATTGGAA
                      ____________________________________________________________
consensus             TAAAATGGAAGAGACAAAGAAGAAGGATGGAGATTCACTTTTGCTGAATTGGAATTGGAA
 
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JMSF028H17+           TTGGAATTGGAATGAAAGTTTCGATTTTGAGGATACCCATCACAGGAAGCGGCTATCAAT
JMFS115A12+           TTGGAATTGGAATGAAAGTTTCGATTTTGAGGATACCCATCACAGGAAGCGGCTATCAAT
                      ____________________________________________________________
consensus             TTGGAATTGGAATGAAAGTTTCGATTTTGAGGATACCCATCACAGGAAGCGGCTATCAAT
 
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JMSF028H17+           TTCCCAACTTCTGGAGCAGCGGTGAGGAGAAATGACTCCATTTTACAAGCTCAAAACTTC
JMFS115A12+           TTCCCAACTTCTGGAGCAGCGGTGAGGAGAAATGACTCCATTTTACAAGCTCAAAACTTC
                      ____________________________________________________________
consensus             TTCCCAACTTCTGGAGCAGCGGTGAGGAGAAATGACTCCATTTTACAAGCTCAAAACTTC
 
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JMFS115A12+           TCAATCAGAGGAGAAGATAGGGAGGTTTTAGCGGGGGATAAGTCGATAAGGCCACAAGGG
                      ____________________________________________________________
consensus             TCAATCAGAGGAGAAGATAGGGAGGTTTTAGCGGGGGATAAGTCGATAAGGCCACAAGGG