| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012M02 | Sequence | 520 | 003450 (8) | ref|XP_011102070.1| | 2e-67 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 801 | 005812 (8) | emb|CAN65055.1| | 2e-113 | hypothetical protein VITISV_012378 [Vitis vinifera] |
| JMFF019N05 | Sequence | 588 | 003450 (8) | ref|XP_011102070.1| | 6e-76 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 766 | 005812 (8) | emb|CAN65055.1| | 4e-106 | hypothetical protein VITISV_012378 [Vitis vinifera] |
| JMFS105G08 | Sequence | 601 | 003450 (8) | ref|XP_011102070.1| | 6e-76 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | |||||
| JMFS117D09 | Sequence | 610 | 003450 (8) | ref|XP_011102070.1| | 1e-76 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | |||||
| JMFS123C06 | Sequence | 575 | 003450 (8) | ref|XP_011102070.1| | 2e-74 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | |||||
| JMFS141C07 | Sequence | 626 | 003450 (8) | ref|XP_011102070.1| | 5e-74 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | |||||
| JMFS167E04 | Sequence | 634 | 003450 (8) | ref|XP_011102070.1| | 2e-81 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | |||||
| JMSF027K20 | Sequence | 661 | 003450 (8) | ref|XP_011102070.1| | 2e-82 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 748 | 005812 (8) | ref|XP_007025271.1| | 1e-131 | Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1 |
This contig is upended
. : . : . : . : . : . :
JMSF027K20+ TCTATCAGTTCTGTGAGAGCATTAAGTTCTTTTGGCAATTCACCTG
JMFS167E04+ GTGAGAGCATTAAGTTCTTTTGGCAATTCACCTG
JMFS117D09+ CCTG
JMFS105G08+ G
____________________________________________________________
consensus TCTATCAGTTCTGTGAGAGCATTAAGTTCTTTTGGCAATTCACCTG
. : . : . : . : . : . :
JMSF027K20+ TGAGATAATTACCACTAAGAAAGAAATGTTGTAAGTTGACAAGTTTCCCAAGCTCAGGTG
JMFS167E04+ TGAGATAATTACCACTAAGAAAGAAATGTTGTAAGTTGACAAGTTTCCCAAGCTCAGGTG
JMFS123C06+ ATAATTACCACTAAGAAAGAAATGTTGTAAGTTGACAAGTTTCNCAAGCTCAGGTG
JMFS117D09+ TGAGATAATTACCACTAAGAAAGAAATGTTGTAAGTTGACAAGTTTCCCAAGCTCAGGTG
JMFF019N05+ TGAGATAATTACCACTAAGAAAGAAATGTTGTAAGTTGACAAGTTTCCCAAGCTCAGGTG
JMFS141C07+ AAATGTTGTAAGTTGACAAGTTTCCCAAGCTCAGGTG
JMFS105G08+ TGAGATAATTACCACTAAGAAAGAAATGTTGTAAGTTGACAAGTTTCCCAAGCTCAGGTG
____________________________________________________________
consensus TGAGATAATTACCACTAAGAAAGAAATGTTGTAAGTTGACAAGTTTCCCAAGCTCAGGTG
. : . : . : . : . : . :
JMSF027K20+ GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
JMFS167E04+ GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
JMFS123C06+ GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
JMFS117D09+ GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
JMFF019N05+ GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
JMFS141C07+ GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
JMFF012M02+ CCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
JMFS105G08+ GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
____________________________________________________________
consensus GAACACTTCCAGTGAACATATTGTTCTCCAAGCTTAAATATGTAAGAGTTGTTATACTTC
. : . : . : . : . : . :
JMSF027K20+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
JMFS167E04+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
JMFS123C06+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
JMFS117D09+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
JMFF019N05+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
JMFS141C07+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
JMFF012M02+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
JMFS105G08+ CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
____________________________________________________________
consensus CCAAGTATTTTGGAATTGGCCCAGACAATCGATTCACAGTAAGAGATATAAGTTCCAGTT
. : . : . : . : . : . :
JMSF027K20+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
JMFS167E04+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
JMFS123C06+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
JMFS117D09+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
JMFF019N05+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
JMFS141C07+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
JMFF012M02+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
JMFS105G08+ TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
____________________________________________________________
consensus TCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAGTAGTTGCGGGTGAGATCAATTG
. : . : . : . : . : . :
JMSF027K20+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
JMFS167E04+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
JMFS123C06+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
JMFS117D09+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
JMFF019N05+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
JMFS141C07+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGAACACCTTGCAGATCCTGTCCTT
JMFF012M02+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
JMFS105G08+ TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
____________________________________________________________
consensus TCTTGAGAAAGGGTAACTTCACCAAAGCAGGAGGGAGGACACCTTGCAGATCCTGTCCTT
. : . : . : . : . : . :
JMSF027K20+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
JMFS167E04+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
JMFS123C06+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
JMFS117D09+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
JMFF019N05+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
JMFS141C07+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
JMFF012M02+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
JMFS105G08+ TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
____________________________________________________________
consensus TCAAATTTATCCTTAGCACATGGCAAATACCAGCAGGGAAGTTACAATCGCAAGTGAGAT
. : . : . : . : . : . :
JMSF027K20+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
JMFS167E04+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
JMFS123C06+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
JMFS117D09+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
JMFF019N05+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
JMFS141C07+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
JMFF012M02+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
JMFS105G08+ TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
____________________________________________________________
consensus TATTAGTGTAGAGAGGTGTATCTATGCTTTGTGGTGCCAACCAGTTGGAGTGGTTGCCGC
. : . : . : . : . : . :
JMSF027K20+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
JMFS167E04+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
JMFS123C06+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
JMFS117D09+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
JMFF019N05+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
JMFS141C07+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
JMFF012M02+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
JMFS105G08+ AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
____________________________________________________________
consensus AAGGATTTAAGCTAAAATCCCAATCCTTCTTCCCCACTTGATTAGCTATTTCCTTAAGTG
. : . : . : . : . : . :
JMSF027K20+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
JMFS167E04+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
JMFS123C06+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
JMFS117D09+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
JMFF019N05+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
JMFS141C07+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
JMFF012M02+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
JMFS105G08+ CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
____________________________________________________________
consensus CATTTAATTCATGTTGAGGAAGATGCCCACTCTGTGCTTCAAGAAATAATGGATAGAAGA
. : . : . : . : . : . :
JMSF027K20+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGG
JMFS167E04+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGGTT
JMFS123C06+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGG
JMFS117D09+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGGTT
JMFF019N05+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGGTTGAACTCC
JMFS141C07+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGGTTGAACTCCGGGGAAGA
JMFF012M02+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGGTTGAACTCC
JMFS105G08+ AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGGTTGAACTCCGGGGAAGATCAA
____________________________________________________________
consensus AGAAGGAGAGTATAATTGGTATGAGGATTCTGAACATGGTTGAACTCCGGGGAAGATCAA