Contig 003449:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS105C03Sequence620003449 (2)ref|XP_009804116.1|4e-126PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li
JMSF001L02Sequence422003449 (2)ref|XP_009804116.1|2e-67PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li679012038 (25)ref|XP_009612962.1|9e-112PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li

Alignment

This contig is upended


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JMFS105C03+                                                   AGCAGCTTTGAGAAGGCCAC
                      ____________________________________________________________
consensus                                                     AGCAGCTTTGAGAAGGCCAC
 
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JMFS105C03+           GAGCATCTTCAGAAGAGTACGGAGACAGCACCTTCAATCCTGGGCATGCAGCATACCAAG
                      ____________________________________________________________
consensus             GAGCATCTTCAGAAGAGTACGGAGACAGCACCTTCAATCCTGGGCATGCAGCATACCAAG
 
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JMFS105C03+           CTGCATAGCACTGGGAATGTTGGGCACCAACACCAGCTGCAGCTCCATTAGGGCCTCTGA
                      ____________________________________________________________
consensus             CTGCATAGCACTGGGAATGTTGGGCACCAACACCAGCTGCAGCTCCATTAGGGCCTCTGA
 
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JMFS105C03+           AAACAATAGGTACAGATATCTGGCCAGCAGACATGTAGTTTGACTTTGCAGCAGAATTAA
                      ____________________________________________________________
consensus             AAACAATAGGTACAGATATCTGGCCAGCAGACATGTAGTTTGACTTTGCAGCAGAATTAA
 
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JMSF001L02+                                   AAAAGTTAAATGTCATGAATTCCACAATAGGCTTCA
JMFS105C03+           TGATATGATCAATTGCCTGCATTGAAAAGTTAAATGTCATGAATTCCACAATAGGCTTCA
                      ____________________________________________________________
consensus             TGATATGATCAATTGCCTGCATTGAAAAGTTAAATGTCATGAATTCCACAATAGGCTTCA
 
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JMSF001L02+           GACCATAGTAAGCTGCACCTACACCAATCCCAGCAAATCCAGCCTCCGTAATAGGTGTAT
JMFS105C03+           GACCATAGTAAGCTGCACCTACACCAATCCCAGCAAATCCAGCCTCCGTAATAGGTGTAT
                      ____________________________________________________________
consensus             GACCATAGTAAGCTGCACCTACACCAATCCCAGCAAATCCAGCCTCCGTAATAGGTGTAT
 
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JMSF001L02+           CCAGAACCCTGTCCGGACCATATTTGTCCAAAAGACCTTTTGAAATCTTGTATGCACCCT
JMFS105C03+           CCAGAACCCTGTCCGGACCATATTTGTCCAAAAGACCTTTTGAAATCTTGTATGCACCCT
                      ____________________________________________________________
consensus             CCAGAACCCTGTCCGGACCATATTTGTCCAAAAGACCTTTTGAAATCTTGTATGCACCCT
 
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JMSF001L02+           GGTACTCTCCGACCTCTTCACCCATCAAAAAGACCTTAGGATCCGCAGACATTTCTTCAT
JMFS105C03+           GGTACTCTCCGACCTCTTCACCCATCAAAAAGACCTTAGGATCCGCAGACATTTCTTCAT
                      ____________________________________________________________
consensus             GGTACTCTCCGACCTCTTCACCCATCAAAAAGACCTTAGGATCCGCAGACATTTCTTCAT
 
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JMSF001L02+           CAAGCGCGGAATTTAAAGCATCGCGCACTGTTATCTCTTT                    
JMFS105C03+           CAAGCGCGGAATTTAAAGCATCGCGCACTGTTATCTCTTTTGCTGCAGAAGAGTAACATC
                      ____________________________________________________________
consensus             CAAGCGCGGAATTTAAAGCATCGCGCACTGTTATCTCTTTTGCTGCAGAAGAGTAACATC
 
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JMFS105C03+           TGGATGCAGATACCCTACTTCTTATCAACAGGTGATTTAAACTCAAAGAAGAAATGCCTC
                      ____________________________________________________________
consensus             TGGATGCAGATACCCTACTTCTTATCAACAGGTGATTTAAACTCAAAGAAGAAATGCCTC
 
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JMFS105C03+           TAGAAGCCATTTTGCGAGCTATAACTGCGGACATACTCGCTTCTTCGAAGATGAACACAA
                      ____________________________________________________________
consensus             TAGAAGCCATTTTGCGAGCTATAACTGCGGACATACTCGCTTCTTCGAAGATGAACACAA