Contig 003445:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033H10Sequence591003445 (3)ref|XP_009613489.1|5e-70PREDICTED: ALG-2 interacting protein X [Nicotiana tomentosiformis]
JMFS099H08Sequence614003445 (3)ref|XP_009613489.1|4e-79PREDICTED: ALG-2 interacting protein X [Nicotiana tomentosiformis]
JMFS101C03Sequence611003445 (3)ref|XP_009613489.1|1e-68PREDICTED: ALG-2 interacting protein X [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+              ACAGACACATCCACAGTGGTGGAGTTCCCCGTAGATGCCTTCATGNCCACATTATCT
JMFS033H10+                                                                      T
JMFS101C03+                                                                      T
                      ____________________________________________________________
consensus                ACAGACACATCCACAGTGGTGGAGTTCCCCGTAGATGCCTTCATGNCCACATTATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           TTCAAGAAAGTAAATGCCCCAGCTGCTGCTATAAATGAGTGAGATGCCTGCCTTCTCCCA
JMFS033H10+           TTCAAGAAAGTAAATGCCCCAGCTGCTGCTATAAATGAGTGAGATGCCTGCCTTCTCCCA
JMFS101C03+           TTCAAGAAAGTAAATGCCCCAGCTGCTGCTATAAATGAGTGAGATGCCTGCCTTCTCCCA
                      ____________________________________________________________
consensus             TTCAAGAAAGTAAATGCCCCAGCTGCTGCTATAAATGAGTGAGATGCCTGCCTTCTCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           TCAACAGATGATCGATCAAAACTCAGCCCCATTTGACTATGAACTGCCCCCAAATTAAAC
JMFS033H10+           TCAACAGATGATCGATCAAAACTCAGCCCCATTTGACTATGAACTGCCCCCAAATTAAAC
JMFS101C03+           TCAACAGATGATCGATCAAAACTCAGCCCCATTTGACTATGAACTGCCCCCAAATTAAAC
                      ____________________________________________________________
consensus             TCAACAGATGATCGATCAAAACTCAGCCCCATTTGACTATGAACTGCCCCCAAATTAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           AGAACCGCAGCTTTTTCCAAATGAATGTTCTGCTGAACAGCCTTCTGCTTGTTTTTGAAG
JMFS033H10+           AGAACCGCAGCTTTTTCCAAATGAATGTTCTGCTGAACAGCCTTCTGCTTGTTTTTGAAG
JMFS101C03+           AGAACCGCAGCTTTTTCCAAATGAATGTTCTGCTGAACAGCCTTCTGCTTGTTTTTGAAG
                      ____________________________________________________________
consensus             AGAACCGCAGCTTTTTCCAAATGAATGTTCTGCTGAACAGCCTTCTGCTTGTTTTTGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           GCATCGTACCAGGTAAACGTCACCGTGTTGATATGATCCTTGTCGGCGGAGATAGGGAAG
JMFS033H10+           GCATCGTACCAGGTAAACGTCACCGTGTTGATATGATCCTTGTCGGCGGAGATAGGGAAG
JMFS101C03+           GCATCGTACCAGGTAAACGTCACCGTGTTGATATGATCCTTGTCGGCGGAGATAGGGAAG
                      ____________________________________________________________
consensus             GCATCGTACCAGGTAAACGTCACCGTGTTGATATGATCCTTGTCGGCGGAGATAGGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           CGAGACTCGACGGCGCAGAGAGCTCTAAAGTACTTCTGGAGGAGATCGCGGCGAGCGGGG
JMFS033H10+           CGAGACTCGACGGCGCAGAGAGCTCTAAAGTACTTCTGGAGGAGATCGCGGCGAGCGGGG
JMFS101C03+           CGAGACTCGACGGCGCAGAGAGCTCTAAAGTACTTCTGGAGGAGATCGCGGCGAGCGGGG
                      ____________________________________________________________
consensus             CGAGACTCGACGGCGCAGAGAGCTCTAAAGTACTTCTGGAGGAGATCGCGGCGAGCGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           AGGGAATCTGAGATTCCACGCTCGAGCTCGGAGCGGAGCTCCCTGAGCGTTTCGAGGTCG
JMFS033H10+           AGGGAATCTGAGATTCCACGCTCGAGCTCGGAGCGGAGCTCCCTGAGCGTTTCGAGGTCG
JMFS101C03+           AGGGAATCTGAGATTCCACGCTCGAGCTCGGAGCGGAGCTCCCTGAGCGTTTCGAGGTCG
                      ____________________________________________________________
consensus             AGGGAATCTGAGATTCCACGCTCGAGCTCGGAGCGGAGCTCCCTGAGCGTTTCGAGGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           TCCTCGAGGCTCTGAGCCTCCCGCTCGGAGTAGTGGACGACGATGAAGTTGCGGAGCGGG
JMFS033H10+           TCCTCGAGGCTCTGAGCCTCCCGCTCGGAGTAGTGGACGACGATGAAGTTGCGGAGCGGG
JMFS101C03+           TCCTCGAGGCTCTGAGCCTCCCGCTCGGAGTAGTGGACGACGATGAAGTTGCGGAGCGGG
                      ____________________________________________________________
consensus             TCCTCGAGGCTCTGAGCCTCCCGCTCGGAGTAGTGGACGACGATGAAGTTGCGGAGCGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           CGGTAGAGGTCAATAGACACTGTCTTCTTCTCGTAGATTGCTAGCATGACGTTTGTAGTC
JMFS033H10+           CGGTAGAGGTCAATAGACACTGTCTTCTTCTCGTAGATTGCTAGCATGACGTTTGTAGTC
JMFS101C03+           CGGTAGAGGTCAATAGACACTGTCTTCTTCTCGTAGATTGCTAGCATGACGTTTGTAGTC
                      ____________________________________________________________
consensus             CGGTAGAGGTCAATAGACACTGTCTTCTTCTCGTAGATTGCTAGCATGACGTTTGTAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           GCCGACGACGACGGCGACGCCATTATTCACGGTGGCGGTAGTGGTGGCGGATCAGGTATT
JMFS033H10+           GCCGACGACGACGGCGACGCCATTATTCACGGTGGCGGTAGTGGTGGCGGATCAGGTATT
JMFS101C03+           GCCGACGACGACGGCGACGCCATTATTCACGGTGGCGGTAGTGGTGGCGGATCAGGTATT
                      ____________________________________________________________
consensus             GCCGACGACGACGGCGACGCCATTATTCACGGTGGCGGTAGTGGTGGCGGATCAGGTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS099H08+           CTGACAGCAAGGTATAG                                           
JMFS033H10+           CTGACAGCAAGGTATAGACGTACAGTGTTATAGAGACTTTTGT                 
JMFS101C03+           CTGACAGCAAGGTATAGACGTACAGTGTTATAGAGACTTTTGTGCGAGTCAATGAAAGTT
                      ____________________________________________________________
consensus             CTGACAGCAAGGTATAGACGTACAGTGTTATAGAGACTTTTGTGCGAGTCAATGAAAGTT