Contig 003441:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS005B05Sequence571003441 (5)
JMFS099B06Sequence614003441 (5)
JMFS103F04Sequence567003441 (5)
JMFS116A12Sequence602003441 (5)
JMFS137B05Sequence596003441 (5)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS116A12+ CCTGGAAAACCTG
                      ____________________________________________________________
consensus CCTGGAAAACCTG
 
. : . : . : . : . : . :
JMFS116A12+ GCTGCAAGGCCGGTCTGGCAAGAGGATAAGATGAGACTGTCTGAGGTGAAGATTGCTGTA
JMFS137B05+ AGGATAAGATGAGACTGTCTGAGGTGAAGATTGCTGTA
                      ____________________________________________________________
consensus GCTGCAAGGCCGGTCTGGCAAGAGGATAAGATGAGACTGTCTGAGGTGAAGATTGCTGTA
 
. : . : . : . : . : . :
JMFS116A12+ AGGTAGTAATGGGAGCAGCAAATCGTGGATCCATAGGTGACTGAGGAACAGCGACACTTG
JMFS137B05+ AGGTAGTAATGGGAGCAGCAAATCGTGGATCCATAGGTGACTGAGGAACAGCGACACTTG
                      ____________________________________________________________
consensus AGGTAGTAATGGGAGCAGCAAATCGTGGATCCATAGGTGACTGAGGAACAGCGACACTTG
 
. : . : . : . : . : . :
JMFS116A12+ GCTGCAAAGTGCCCATGCTCTGTGGGGAGGATACCTTAGGGACTGGAGGTGATGAAATAG
JMFS137B05+ GCTGCAAAGTGCCCATGCTCTGTGGGGAGGATACCTTAGGGACTGGAGGTGATGAAATAG
JMFS005B05+ GTGGGGAGGATACCTTAGGGACTGGAGGTGATGAAATAG
JMFS099B06+ AGGTGATGAAATAG
                      ____________________________________________________________
consensus GCTGCAAAGTGCCCATGCTCTGTGGGGAGGATACCTTAGGGACTGGAGGTGATGAAATAG
 
. : . : . : . : . : . :
JMFS116A12+ GGGCTGAAACAGGTCTAACTGATGGTGAGAAAGATGGCGGTCCAGCAAATGAAGAATGCG
JMFS137B05+ GGGCTGAAACAGGTCTAACTGATGGTGAGAAAGATGGCGGTCCAGCAAATGAAGAATGCG
JMFS005B05+ GGGCTGAAACAGGTCTAACTGATGGTGAGAAAGATGGCGGTCCAGCAAATGAAGAATGCG
JMFS103F04+ TGAAACAGGTCTAACTGATGGTGAGAAAGATGGCGGTCCAGCAAATGAAGAATGCG
JMFS099B06+ GGGCTGAAACAGGTCTAACTGATGGTGAGAAAGATGGCGGTCCAGCAAATGAAGAATGCG
                      ____________________________________________________________
consensus GGGCTGAAACAGGTCTAACTGATGGTGAGAAAGATGGCGGTCCAGCAAATGAAGAATGCG
 
. : . : . : . : . : . :
JMFS116A12+ GAGGTGGCACCTGGGCAGTTGAAGAAAATTGCGGACTTGGAAAACGTTGGAAAGAGCCTG
JMFS137B05+ GAGGTGGCACCTGGGCAGTTGAAGAAAATTGCGGACTTGGAAAACGTTGGAAAGAGCCTG
JMFS005B05+ GAGGTGGCACCTGGGCAGTTGAAGAAAATTGCGGACTTGGAAAACGTTGGAAAGAGCCTG
JMFS103F04+ GAGGTGGCACCTGGGCAGTTGAAGAAAATTGCGGACTTGGAAAACGTTGGAAAGAGCCTG
JMFS099B06+ GAGGTGGCACCTGGGCAGTTGAAGAAAATTGCGGACTTGGAAAACGTTGGAAAGAGCCTG
                      ____________________________________________________________
consensus GAGGTGGCACCTGGGCAGTTGAAGAAAATTGCGGACTTGGAAAACGTTGGAAAGAGCCTG
 
. : . : . : . : . : . :
JMFS116A12+ GACCTGATGTACCATGTGATGCAGACATTGGAGGTGGTGAAATCCCCGGCGCCATAGGTC
JMFS137B05+ GACCTGATGTACCATGTGATGCAGACATTGGAGGTGGTGAAATCCCCGGCGCCATAGGTC
JMFS005B05+ GACCTGATGTACCATGTGATGCAGACATTGGAGGTGGTGAAATCCCCGGCGCCATAGGTC
JMFS103F04+ GACCTGATGTACCATGTGATGCAGACATTGGAGGTGGTGAAATCCCCGGCGCCATAGGTC
JMFS099B06+ GACCTGATGTACCATGTGATGCAGACATTGGAGGTGGTGAAATCCCCGGCGCCATAGGTC
                      ____________________________________________________________
consensus GACCTGATGTACCATGTGATGCAGACATTGGAGGTGGTGAAATCCCCGGCGCCATAGGTC
 
. : . : . : . : . : . :
JMFS116A12+ TGAAACCCGAAGCCTCATATCCAACCACAGGCCCAGATGAATAGGAAGGTGGCATTGACT
JMFS137B05+ TGAAACCCGAAGCCTCATATCCAACCACAGGCCCAGATGAATAGGAAGGTGGCATTGACT
JMFS005B05+ TGAAACCCGAAGCCTCATATCCAACCACAGGCCCAGATGAATAGGAAGGTGGCATTGACT
JMFS103F04+ TGAAACCCGAAGCCTCATATCCAACCACAGGCCCAGATGAATAGGAAGGTGGCATTGACT
JMFS099B06+ TGAAACCCGAAGCCTCATATCCAACCACAGGCCCAGATGAATAGGAAGGTGGCATTGACT
                      ____________________________________________________________
consensus TGAAACCCGAAGCCTCATATCCAACCACAGGCCCAGATGAATAGGAAGGTGGCATTGACT
 
. : . : . : . : . : . :
JMFS116A12+ GGGAGGAAGCGGGAGGAGGAGGCTGAAAAGCAGATGATTGGAAAGGTGTTGCACCCCGTG
JMFS137B05+ GGGAGGAAGCGGGAGGAGGAGGCTGAAAAGCAGATGATTGGAAAGGTGTTGCACCCCGTG
JMFS005B05+ GGGAGGAAGCGGGAGGAGGAGGCTGAAAAGCAGATGATTGGAAAGGTGTTGCACCCCGTG
JMFS103F04+ GGGAGGAAGCGGGAGGAGGAGGCTGAAAAGCAGATGATTGGAAAGGTGTTGCACCCCGTG
JMFS099B06+ GGGAGGAAGCGGGAGGAGGAGGCTGAAAAGCAGATGATTGGAAAGGTGTTGCACCCCGTG
                      ____________________________________________________________
consensus GGGAGGAAGCGGGAGGAGGAGGCTGAAAAGCAGATGATTGGAAAGGTGTTGCACCCCGTG
 
. : . : . : . : . : . :
JMFS116A12+ GAGGCGGAGCAGAAAAAGGTGTGGAAGCAGGTCTTAAAGGCAAATTCAATTGATTAGGAT
JMFS137B05+ GAGGCGGAGCAGAAAAAGGTGTGGAAGCAGGTCTTAAAGGCAAATTCAATTGATTAGGAT
JMFS005B05+ GAGGCGGAGCAGAAAAAGGTGTGGAAGCAGGTCTTAAAGGCAAATTCAATTGATTAGGAT
JMFS103F04+ GAGGCGGAGCAGAAAAAGGTGTGGAAGCAGGTCTTAAAGGCAAATTCAATTGATTAGGAT
JMFS099B06+ GAGGCGGAGCAGAAAAAGGTGTGGAAGCAGGTCTTAAAGGCAAATTCAATTGATTAGGAT
                      ____________________________________________________________
consensus GAGGCGGAGCAGAAAAAGGTGTGGAAGCAGGTCTTAAAGGCAAATTCAATTGATTAGGAT
 
. : . : . : . : . : . :
JMFS116A12+ TTTCAGTCCCCATGGTTTAATGACAATGCTCCTGGGAAAGTATGAAATT
JMFS137B05+ TTTCAGTCCCCATGGTTTAATGACAATGCTCCTGGGAAAGTATGAAATTGGGTTGGTGGC
JMFS005B05+ TTTCAGTCCCCATGGTTTAATGACAATGCTCCTGGGAAAGTATGAAATTGGGTTGGTGGC
JMFS103F04+ TTTCAGTCCCCATGGTTTAATGACAATGCTCCTGGGAAAGTATGAAATTGGGTTGGTGGC
JMFS099B06+ TTTCAGTCCCCATGGTTTAATGACAATGCTCCTGGGAAAGTATGAAATTGGGTTGGTGGC
                      ____________________________________________________________
consensus TTTCAGTCCCCATGGTTTAATGACAATGCTCCTGGGAAAGTATGAAATTGGGTTGGTGGC
 
. : . : . : . : . : . :
JMFS137B05+ GGTGTTTTGGGTAGTGGA
JMFS005B05+ GGTGTTTTGGGTAGTGGAGAATTAGAGTTGAAAGAGGTGGAGATCGGCGGTAGTTGATGT
JMFS103F04+ GGTGTTTTGGGTAGTGGAGAATTAGAGTTGAAAGAGGTGGAGATCGGCGGTAGTTGATGT
JMFS099B06+ GGTGTTTTGGGTAGTGGAGAATTAGAGTTGAAAGAGGTGGAGATCGGCGGTAGTTGATGT
                      ____________________________________________________________
consensus GGTGTTTTGGGTAGTGGAGAATTAGAGTTGAAAGAGGTGGAGATCGGCGGTAGTTGATGT
 
. : . : . : . : . : . :
JMFS005B05+ TTGAAGTGCGATTTATATGGCAGTCAAATTGCAGCGCCGAAATTGATAGAGG
JMFS103F04+ TTGAAGTGCGATTTATATGGCAGTCAAATTGCAGCGCCGAAATTGATAGAGGAATTACGC
JMFS099B06+ TTGAAGTGCGATTTATATGGCAGTCAAATTGCAGCGCCGAAATTGATAGAGGAATTACGC
                      ____________________________________________________________
consensus TTGAAGTGCGATTTATATGGCAGTCAAATTGCAGCGCCGAAATTGATAGAGGAATTACGC
 
. : . : . : . : . : . :
JMFS103F04+ ATCAGGAAAGAGATCTAGAGAGGAGGGAGGA
JMFS099B06+ ATCAGGAAAGAGATCTAGAGAGGAGGGAGGAGCATAGGAAATAGGAATACGATGAGAGAA
                      ____________________________________________________________
consensus ATCAGGAAAGAGATCTAGAGAGGAGGGAGGAGCATAGGAAATAGGAATACGATGAGAGAA