Contig 003440:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS062F12+                                                       AGTCGAACGGATCGCG
                      ____________________________________________________________
consensus                                                         AGTCGAACGGATCGCG
 
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JMFS062F12+           ACAGAGACAGGAGAAGTACTCCGGAGAAGCGTCGTATTTGAAGAAGCAACGTCCCGTTGA
                      ____________________________________________________________
consensus             ACAGAGACAGGAGAAGTACTCCGGAGAAGCGTCGTATTTGAAGAAGCAACGTCCCGTTGA
 
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JMFS062F12+           AGTGTTGTAGAGGCTCAGAAGCGAAGGACCAGAAAGAGCAGCAATGGCCCAGGAATCGGG
JMFS097C10+                                            AAGAGCAGCAATGGCCCAGGAATCGGG
                      ____________________________________________________________
consensus             AGTGTTGTAGAGGCTCAGAAGCGAAGGACCAGAAAGAGCAGCAATGGCCCAGGAATCGGG
 
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JMFS062F12+           TCCGGTTTGGACCCAGCAGAGGTCCTGGATTCCCGGCTTTGAACTGGAGTTACTAGAATT
JMFS097C10+           TCCGGTTTGGACCCAGCAGAGGTCCTGGATTCCCGGCTNTGAACTGGAGTTACTAGAATT
                      ____________________________________________________________
consensus             TCCGGTTTGGACCCAGCAGAGGTCCTGGATTCCCGGCTTTGAACTGGAGTTACTAGAATT
 
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JMFS062F12+           AGTGTCGAAGAACAAAAGAGGCGTTTTCGACCGCAAATCAAGGAGGCAAATACGGCCTTG
JMFS097C10+           AGTGTCGAAGAACAAAAGAGGCGTTTTCGACCGCAAATAAAGGAGGCAAATACGGCCTTG
                      ____________________________________________________________
consensus             AGTGTCGAAGAACAAAAGAGGCGTTTTCGACCGCAAATCAAGGAGGCAAATACGGCCTTG
 
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JMFS062F12+           GCGGTCACCGACGGCGAGAATGAGGTGCTGATTGGGCGCGTCGGAGGAGAGTAGGAAGTG
JMFS097C10+           GCGGTCACCGACGGCGAGAATGAGGTGCTGATTGGGCGCGTCGGAGGAGAGTAGGAAGTG
                      ____________________________________________________________
consensus             GCGGTCACCGACGGCGAGAATGAGGTGCTGATTGGGCGCGTCGGAGGAGAGTAGGAAGTG
 
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JMFS062F12+           CGGCAGCGGGTGCGGGGACCACCGGACGGAGGTGATGAAGGGGGAGAGAGCAGCCGAGGA
JMFS097C10+           CGGCAGCGGGTGCGGGGACCACCGGACGGAGGTGATGAAGGGGGAGAGAGCAGCCGAGGA
                      ____________________________________________________________
consensus             CGGCAGCGGGTGCGGGGACCACCGGACGGAGGTGATGAAGGGGGAGAGAGCAGCCGAGGA
 
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JMFS062F12+           CGAGGAAGGCGGGGGGAGAGGGATAGCAGTGACGAGCTGCATAGAGTGAGTTTCGACGAC
JMFS097C10+           CGAGGAAGGCGGGGGGAGAGGGATAGCAGTGACGAGCTGCATAGAGTGAGTTTCGACGAC
                      ____________________________________________________________
consensus             CGAGGAAGGCGGGGGGAGAGGGATAGCAGTGACGAGCTGCATAGAGTGAGTTTCGACGAC
 
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JMFS062F12+           GGCAACAGAGCTGCCGGAGGCGTAAGCCAAGAGGCCGGTGGTGGAGAGGTCGGCGGATCC
JMFS097C10+           GGCAACAGAGCTGCCGGAGGCGTAAGCCAAGAGGCCGGTGGTGGAGAGGTCGGCGGATCC
                      ____________________________________________________________
consensus             GGCAACAGAGCTGCCGGAGGCGTAAGCCAAGAGGCCGGTGGTGGAGAGGTCGGCGGATCC
 
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JMFS062F12+           GCCGTTGCTGCGGGAAGGTGGACCAGGGAGCATGCAGTCCCATGATTCGTTTAGCGGTCG
JMFS097C10+           GCCGTTGCTGCGGGAAGGTGGACCAGGGAGCATGCAGTCCCATGATTCGTTTAGCGGTCG
                      ____________________________________________________________
consensus             GCCGTTGCTGCGGGAAGGTGGACCAGGGAGCATGCAGTCCCATGATTCGTTTAGCGGTCG
 
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JMFS062F12+           CTGGATCGACATCGTCGGAGTTGAATTGCAGAGATCAAAGAGGAATTGGGAGGGAGGGAA
JMFS097C10+           CTGGATCGACATCGTCGGAGTTGAATTGCAGAGATCAAAGAGGAATTGGGAGGGAGGGAA
                      ____________________________________________________________
consensus             CTGGATCGACATCGTCGGAGTTGAATTGCAGAGATCAAAGAGGAATTGGGAGGGAGGGAA
 
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JMFS062F12+           GAGA                                                        
JMFS097C10+           GAGATCTCAGGTGGAGACGAAGAAAGACGTGACGGCGACCATGGCGGTTGTCTCAGTCGT
                      ____________________________________________________________
consensus             GAGATCTCAGGTGGAGACGAAGAAAGACGTGACGGCGACCATGGCGGTTGTCTCAGTCGT
 
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JMFS097C10+           GCGTTGACACCTCAGCAGGATACAAGTCCGCCCGGTTGAACCGGAGAAGACCGCAGAGAG
                      ____________________________________________________________
consensus             GCGTTGACACCTCAGCAGGATACAAGTCCGCCCGGTTGAACCGGAGAAGACCGCAGAGAG