| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019H03 | Sequence | 545 | 004760 (8) | dbj|BAE96953.1| | 1e-103 | starch branching enzyme I [Ipomoea batatas] | 715 | 003436 (5) | dbj|BAE96954.1| | 1e-89 | starch branching enzyme I [Ipomoea batatas] |
| JMFS068G03 | Sequence | 624 | 003436 (5) | dbj|BAE96955.1| | 3e-115 | starch branching enzyme I [Ipomoea batatas] | |||||
| JMFS093G06 | Sequence | 284 | 003436 (5) | ||||||||
| JMSF011L01 | Sequence | 433 | 004760 (8) | dbj|BAE96956.1| | 2e-56 | starch branching enzyme I [Ipomoea batatas] | 744 | 003436 (5) | dbj|BAE96953.1| | 3e-89 | starch branching enzyme I [Ipomoea batatas] |
| JMSF018D09 | Sequence | 218 | 004760 (8) | dbj|BAE96953.1| | 4e-08 | starch branching enzyme I [Ipomoea batatas] | 796 | 003436 (5) | dbj|BAE96956.1| | 8e-92 | starch branching enzyme I [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
JMFS068G03- GAAGCTTCTGT
____________________________________________________________
consensus GAAGCTTCTGT
. : . : . : . : . : . :
JMFS068G03- TGTTGATCATGGAATTGCACTTGTCAAGATGATTCACTTTCTATCAATGAAATTTAGATA
____________________________________________________________
consensus TGTTGATCATGGAATTGCACTTGTCAAGATGATTCACTTTCTATCAATGAAATTTAGATA
. : . : . : . : . : . :
JMFS068G03- CCCTTCTCCTCCTAATGCCATTGATAGGAGAAGGGTATCTAAATTTCATGGGAAATGAGT
____________________________________________________________
consensus CCCTTCTCCTCCTAATGCCATTGATAGGAGAAGGGTATCTAAATTTCATGGGAAATGAGT
. : . : . : . : . : . :
JMFS068G03- TTGGCCATCCTGATTGGATTGACTTCCCTAGAGATGGCAACAACTGGAGTTATGAGAAGT
____________________________________________________________
consensus TTGGCCATCCTGATTGGATTGACTTCCCTAGAGATGGCAACAACTGGAGTTATGAGAAGT
. : . : . : . : . : . :
JMFS068G03- GCAGACGCCAATGGAATCTTGTGGATACAAATCACTTGAGATACAAGTTCATGAATGCAT
____________________________________________________________
consensus GCAGACGCCAATGGAATCTTGTGGATACAAATCACTTGAGATACAAGTTCATGAATGCAT
. : . : . : . : . : . :
JMFS068G03- TTGACAGGGCCATGAATTTGCTTGATGATGAGTTTTCCTTCCTTGCTTCAGAAAAACAGA
____________________________________________________________
consensus TTGACAGGGCCATGAATTTGCTTGATGATGAGTTTTCCTTCCTTGCTTCAGAAAAACAGA
. : . : . : . : . : . :
JMFS068G03- TAGTAAGCAGCATAGATGAAGATAATAAGGTAATTGTATTTGAGCGTGGAGATCTGGTAT
rJMSF011L01+ GGTAT
rJMFF019H03+ GGTAT
rJMSF018D09+ GTAAGCAGCATAGATGAAGATAATAAGGTAATTGTA-TTGAGCGTGGAGATCTGGTAT
____________________________________________________________
consensus TAGTAAGCAGCATAGATGAAGATAATAAGGTAATTGTATTTGAGCGTGGAGATCTGGTAT
. : . : . : . : . : . :
JMFS068G03- TTGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
rJMSF011L01+ TTGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
rJMFF019H03+ TNGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
rJMSF018D09+ TTGTANTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
____________________________________________________________
consensus TTGTATTTAACTTTCATCCAGAGAATACATACGAGGGGTATAAAGTTGGATGCGACTTGC
. : . : . : . : . : . :
JMFS068G03- CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
rJMSF011L01+ CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
rJMFF019H03+ CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
rJMSF018D09+ CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
____________________________________________________________
consensus CAGGTAAATACCGAGTTGCACTGGATAGTGATGCTTGGGCCTATGGTGGACATGGAAGGG
. : . : . : . : . : . :
JMFS068G03- TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
rJMSF011L01+ TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
rJMFF019H03+ TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
rJMSF018D09+ TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
____________________________________________________________
consensus TGGGGCATGATGTAGAGCATTTCACATCACCTGAAGGAATACCTGGAGTTCCTGAAACAA
. : . : . : . : . : . :
JMFS068G03- ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
rJMSF011L01+ ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
rJMFF019H03+ ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
rJMSF018D09+ ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
____________________________________________________________
consensus ATTTCAATGGTCGTCCAAACTCTTTCAAAGTACTATCTCCTCCTCAGGCATGCGTGGCCT
. : . : . : . : . : . :
JMFS068G03- ATTACAGAGTTGA
rJMSF011L01+ ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
rJMFF019H03+ ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
rJMSF018D09+ ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
____________________________________________________________
consensus ATTACAGAGTTGAAGAAAGCTTAGACGAAGTCCAAGATTCCAGTTTTACTGAGACTATAT
. : . : . : . : . : . :
rJMSF011L01+ CAACCAATCTAGTGTTGGTAAGTGATGACATTGACGATCTTCAAGAATTGCCCACCGAAA
rJMFF019H03+ CAACCAATCTAGTGTTGGTAAGTGATGACATTGGCGATCTTCAAGAATTGCCCACCGAAA
rJMSF018D09+ CAACCAATCTAGTGTTGGTAAGTGATGACATTGACGATCTTCAAGAATTGCCCACCGAAA
____________________________________________________________
consensus CAACCAATCTAGTGTTGGTAAGTGATGACATTGACGATCTTCAAGAATTGCCCACCGAAA
. : . : . : . : . : . :
rJMSF011L01+ ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
rJMFF019H03+ ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
rJMSF018D09+ ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
____________________________________________________________
consensus ATCTTCAGGAATTGCCTACCATGGGTAATAGTGATGATGTTGACGATCTTCAAGATTTGG
. : . : . : . : . : . :
rJMSF011L01+ CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
rJMFF019H03+ CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
rJMSF018D09+ CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
____________________________________________________________
consensus CTGCCATGGGTAATAGTGATGATCTTCAAGAATTGGGTAGCGTGGCTAATAGTATTAGTG
. : . : . : . : . : . :
rJMSF011L01+ ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
rJMFF019H03+ ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
rJMSF018D09+ ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
JMFS093G06+ GGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
____________________________________________________________
consensus ATGTTGGGCAAAGAAAGGTTCAAGACCTGGAGGAGAACCCCCCGGATCTGGATGATGAGT
. : . : . : . : . : . :
rJMSF011L01+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
rJMFF019H03+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
rJMSF018D09+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
JMFS093G06+ CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
____________________________________________________________
consensus CAGATTCTTGAGGCAGCTATCTATCTATCTATCTTTGAGCCATATTATATGTACAGATGG
. : . : . : . : . : . :
rJMSF011L01+ AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
rJMFF019H03+ AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
rJMSF018D09+ AAGAGGATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
JMFS093G06+ AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
____________________________________________________________
consensus AAGAGAATCAAGGTTGTCTTGTTATGTTTGATGTTTTTAATTAGAATGGCTGTAAATTTA
. : . : . : . : . : . :
rJMSF011L01+ AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
rJMFF019H03+ AATATAACCTTGTGAAACTGAATCCATCCATCTTT
rJMSF018D09+ AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
JMFS093G06+ AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
____________________________________________________________
consensus AATATAACCTTGTGAAACTGAATCCATCCATCTTTTGAAGTTGGTCCTTTAATTTGATGT
. : . : . : . : . : . :
rJMSF011L01+ CTGCAATAAAGCAACGGCT
rJMSF018D09+ CTGCAATAAAGCAACGGCT
JMFS093G06+ CTGCAATAAAGCAACGGCTTGTATAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTC
____________________________________________________________
consensus CTGCAATAAAGCAACGGCTTGTATAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTC