Contig 003432:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048J05+                                                                    ATT
                      ____________________________________________________________
consensus                                                                      ATT
 
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JMSF048J05+           CAAGTAGTCAAGAAGGATATCGTCCTCCTTGCAAAACAAAAACCGGGCAGCAGGCGAAAG
                      ____________________________________________________________
consensus             CAAGTAGTCAAGAAGGATATCGTCCTCCTTGCAAAACAAAAACCGGGCAGCAGGCGAAAG
 
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JMSF048J05+           TCGAGTATAAATGTACCTAGCACTTGCATGGTCCTTGCCACCCGCAGTTCTTGTGCCAAA
                      ____________________________________________________________
consensus             TCGAGTATAAATGTACCTAGCACTTGCATGGTCCTTGCCACCCGCAGTTCTTGTGCCAAA
 
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JMSF048J05+           TTGACCATTAGGTTGGAAAAGGTTTATGTTATTGCTGCCAACATAATTCTGAGCCAGGCC
                      ____________________________________________________________
consensus             TTGACCATTAGGTTGGAAAAGGTTTATGTTATTGCTGCCAACATAATTCTGAGCCAGGCC
 
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JMSF048J05+           AATAATGGTACCCTGCAAACTTTGTTCACCATGATGGTATGCTGAGTGCTCAGAAACATA
JMFS105H01+                               TTTGTTCACCATGATGGTATGCTGAGTGCTCAGAAACATA
JMFS089F09+                                          TGATGGTATGCTGAGTGCTCAGAAACATA
                      ____________________________________________________________
consensus             AATAATGGTACCCTGCAAACTTTGTTCACCATGATGGTATGCTGAGTGCTCAGAAACATA
 
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JMSF048J05+           CCCAGAGAATTGAGCAACCTTTGCTTCCTTGATGAAGTTTCTCTTAAAAGCACAAAACAG
JMFS105H01+           CCCAGAGAATTGAGCAACCTTTGCTTCCTTGATGAAGTTTCTCTTAAAAGCACAAAACAG
JMFS089F09+           CCCAGAGAATTGAGCAACCTTTGCTTCCTTGATGAAGTTTCTCTTAAAAGCACAAAACAG
                      ____________________________________________________________
consensus             CCCAGAGAATTGAGCAACCTTTGCTTCCTTGATGAAGTTTCTCTTAAAAGCACAAAACAG
 
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JMSF048J05+           GATCTTCCTTTGACCAGGTTTAAGACCATCAAGCATTGATGGAATAGACCTTTGAAGGTC
JMFS105H01+           GATCTTCCTTTGACCAGGTTTAAGACCATCAAGCATTGATGGAATAGACCTTTGAAGGTC
JMFS089F09+           GATCTTCCTTTGACCAGGTTTAAGACCATCAAGCATTGATGGAATAGACCTTTGAAGGTC
                      ____________________________________________________________
consensus             GATCTTCCTTTGACCAGGTTTAAGACCATCAAGCATTGATGGAATAGACCTTTGAAGGTC
 
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JMSF048J05+           AGCCATCGAAAACAGAATAAGCTCTTTGTTAACAAACTCAGTGTATTTAATGGACTTCAA
JMFS105H01+           AGCCATCGAAAACAGAATAAGCTCTTTGTTAACAAACTCAGTGTATTTAATGGACTTCAA
JMFS089F09+           AGCCATCGAAAACAGAATAAGCTCTTTGTTAACAAACTCAGTGTATTTAATGGACTTCAA
                      ____________________________________________________________
consensus             AGCCATCGAAAACAGAATAAGCTCTTTGTTAACAAACTCAGTGTATTTAATGGACTTCAA
 
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JMSF048J05+           ATCCTGATCAAGGTAAGTTCCAGGCTCAAATTGTCTCAGCCAGTTCTTCCTCGCTTCAAT
JMFS105H01+           ATTCTGATCAAGGTAAGTTCCAGGCTCAAATTGTCTCAGCCAGTTCTTCCTCGCTTCAAT
JMFS089F09+           ATTCTGATCAAGGTAAGTTCCAGGCTCAAATTGTCTCAGCCAGTTCTTCCTCGCTTCAAT
                      ____________________________________________________________
consensus             ATTCTGATCAAGGTAAGTTCCAGGCTCAAATTGTCTCAGCCAGTTCTTCCTCGCTTCAAT
 
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JMSF048J05+           CTTCTTCTTGCTAAAAGCAAGTTNTATTGCCTCCCCATCTCGGTCATCTGCCCAGAAAAA
JMFS105H01+           CTTCTTCTTGCTAAAAGCAAGTTCTATTGCCTCCCCATCTCGGTCATCTGCCCAG-AAAA
JMFS089F09+           CTTCTTCTTGCTAAAAGCAAGTTCTATTGCCTCCCCATCTCGGTCATCTGCCCAG-AAAA
                      ____________________________________________________________
consensus             CTTCTTCTTGCTAAAAGCAAGTTCTATTGCCTCCCCATCTCGGTCATCTGCCCAG-AAAA
 
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JMSF048J05+           AATTCTTCCTGTGCAGCTGAAGATTTCTGAAGTACTCCTTTCCTTCCTGAGATGTACTTG
JMFS105H01+           AATTCTTCCTGTGCAGCTGAAGATTTCTGAAGTACTCCTTTCCTTCCTGAGATGTACTTG
JMFS089F09+           AATTCTTCCTGTGCAGCTGAAGATTTCTGAAGTACTCCTTTCCTTCCTGAGATGTACTTG
                      ____________________________________________________________
consensus             AATTCTTCCTGTGCAGCTGAAGATTTCTGAAGTACTCCTTTCCTTCCTGAGATGTACTTG
 
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JMSF048J05+           TTCCCAACCCCTTGTAGTACTTTATAGACCAACCGCGTGCATTGTCCCCTAAACTCTCCT
JMFS105H01+           TTCCCAACCCCTTGTAGTACTTTATAGACCAACCGCGTGCATTGTCCCCTAAACTCTCCT
JMFS089F09+           TTCCCAACCCCTTGTAGTACTTTATAGACCAACCGCGTGCATTGTCCCCTAAACTCTCCT
                      ____________________________________________________________
consensus             TTCCCAACCCCTTGTAGTACTTTATAGACCAACCGCGTGCATTGTCCCCTAAACTCTCCT
 
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JMSF048J05+           TCCATGCTTCATA                                               
JMFS105H01+           TCCATGCTTCATACTCAGGCATAGAGTAAAATGCCAATTTCTCCCCATTTTTTCTTGTAG
JMFS089F09+           TCCATGCTTCATACTCAGGCATAGAGTAAAATGCCAATTTCTCCCCATTTTTTCTTGTAG
                      ____________________________________________________________
consensus             TCCATGCTTCATACTCAGGCATAGAGTAAAATGCCAATTTCTCCCCATTTTTTCTTGTAG
 
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JMFS105H01+           CCTTGACAATAGGTGTGATGAACTCCACTAAAAATGATGGAACTTTCAGCAATGATGGCC
JMFS089F09+           CCTTGACAATAGGTGTGATGAACTCCACTAAAAATGATGGAACTTTCAGCAATGATGGCC
                      ____________________________________________________________
consensus             CCTTGACAATAGGTGTGATGAACTCCACTAAAAATGATGGAACTTTCAGCAATGATGGCC
 
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JMFS105H01+           AGAATGTGTGAATAAAATTAATCAGAAGCCCCTTGATGTGAGAA                
JMFS089F09+           AGAATGTGTGAATAAAATTAATCAGAAGCCCCTTGATGTGAGAANCCATCATGATCCTGA
                      ____________________________________________________________
consensus             AGAATGTGTGAATAAAATTAATCAGAAGCCCCTTGATGTGAGAANCCATCATGATCCTGA