| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS030E02 | Sequence | 607 | 003425 (9) | emb|CDP00856.1| | 8e-104 | unnamed protein product [Coffea canephora] | |||||
| JMFS047B02 | Sequence | 618 | 003425 (9) | ref|XP_009773427.1| | 2e-108 | PREDICTED: dynamin-2A-like [Nicotiana sylvestris] | |||||
| JMFS050E09 | Sequence | 497 | 003425 (9) | emb|CDX94910.1| | 2e-22 | BnaC05g07610D [Brassica napus] | |||||
| JMFS061A06 | Sequence | 614 | 003425 (9) | emb|CDX94910.1| | 1e-37 | BnaC05g07610D [Brassica napus] | |||||
| JMFS082C04 | Sequence | 623 | 003425 (9) | emb|CDX94910.1| | 1e-31 | BnaC05g07610D [Brassica napus] | |||||
| JMFS090A11 | Sequence | 627 | 003425 (9) | emb|CDP00856.1| | 9e-108 | unnamed protein product [Coffea canephora] | |||||
| JMFS126G05 | Sequence | 623 | 003425 (9) | emb|CDX94910.1| | 1e-37 | BnaC05g07610D [Brassica napus] | |||||
| JMFS151G08 | Sequence | 613 | 003425 (9) | emb|CDX94910.1| | 1e-37 | BnaC05g07610D [Brassica napus] | |||||
| JMFS166C06 | Sequence | 612 | 003425 (9) | emb|CDX94910.1| | 1e-37 | BnaC05g07610D [Brassica napus] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS030E02+ ATGGCANCAGATT
JMFS047B02+ CAGATT
____________________________________________________________
consensus ATGGCANCAGATT
. : . : . : . : . : . :
JMFS030E02+ GCCCAATCAGTGCAACCCAAGGAATGTCAGCGGTACTTCGTGGTCCCTGGTTCAACAAAA
JMFS047B02+ GCCCAATCAAGGCAACNCAGGGAATATCAGATGTACTTCGTGGTCCCTGATTCAACAAAA
JMFS090A11+ GTACTTCGTGGTCCCTGGTTCAACAAAA
____________________________________________________________
consensus GCCCAATCAGTGCAACCCAGGGAATGTCAGCTGTACTTCGTGGTCCCTGGTTCAACAAAA
. : . : . : . : . : . :
JMFS030E02+ GAGCTTGAACAGCTGCTAGGATTTTTGGTTCTGAAGCTGCTTGATCTATCTTACTAATAA
JMFS047B02+ GAGCTTGAACAGCAGCAAGGATTTTTGGTTCCGAAGCTACTTGATCTATCTTAGTGATGA
JMFS090A11+ GAGCTTGAACAGCTGCTAGGATTTTTGGTTCTGAAGCTGCTTGATCTATCTTACTAATAA
____________________________________________________________
consensus GAGCTTGAACAGCTGCTAGGATTTTTGGTTCTGAAGCTGCTTGATCTATCTTACTAATAA
. : . : . : . : . : . :
JMFS030E02+ CACCGACAGTTCGTGTACCTTCACTATCAAATTCTTTTGCAATCCTGATGGCTTTAGATG
JMFS047B02+ CACCAACAGTTCTAGTACATTCACCATCATATTCTTTTGCAATTCTGATAGCTTTAGCTG
JMFS090A11+ CACCGACAGTTCGTGTACCTTCACTATCAAATTCTTTTGCAATCCTGATGGCTTTAGATG
____________________________________________________________
consensus CACCGACAGTTCGTGTACCTTCACTATCAAATTCTTTTGCAATCCTGATGGCTTTAGATG
. : . : . : . : . : . :
JMFS030E02+ AGGCAACTTCAGGTGCCTGGGTAGCAGGTATTACAACCAGTAATATTGCATCATTGTGCT
JMFS047B02+ AGGCAACTTCAGGAGCCTGGGCTGCAGGTATCACAACCAGCAAGATTGCATCATTGTGCT
JMFS090A11+ AGGCAACTTCAGGTGCCTGGGTAGCAGGTATTACAACCAGTAATATTGCATCATTGTGCT
____________________________________________________________
consensus AGGCAACTTCAGGTGCCTGGGTAGCAGGTATTACAACCAGTAATATTGCATCATTGTGCT
. : . : . : . : . : . :
JMFS030E02+ CTGCATATTTACTCAATGAATCATCAAGATTTCCTTTATCTACCCCAGGCAAATCAATCA
JMFS047B02+ GGACATATTCAACCAATGAATCATCAAGATTTCCTTTATCTACACCAGGCAAATCAACCA
JMFS090A11+ CTGCATATTTACTCAATGAATCATCAAGATTTCCTTTATCTACCCCAGGCAAATCAATCA
____________________________________________________________
consensus CTGCATATTTACTCAATGAATCATCAAGATTTCCTTTATCTACCCCAGGCAAATCAATCA
. : . : . : . : . : . :
JMFS030E02+ ATTTCAGTGATGGAGCTGTACTTGTTCGAAGCTTCAAATACATCTCATCATGACTTTTGC
JMFS047B02+ ATTTCAAAGGTGGTGCTGTACTTGTTCGAAGCTTCAGATATATCTCATTCCGACTCTTGC
JMFS090A11+ ATTTCAGTGATGGAGCTGTACTTGTTCGAAGCTTCAAATACATCTCATCATGACTTTTGC
____________________________________________________________
consensus ATTTCAGTGATGGAGCTGTACTTGTTCGAAGCTTCAAATACATCTCATCATGACTTTTGC
. : . : . : . : . : . :
JMFS030E02+ TTGAAATTTTGCTGAGCCTATCCTGCAAAGAGTGCCTAAGGGCACTTGCAGATACTTGTT
JMFS047B02+ TTGAAATTTTGCTTAGTCTATCCTGTAAAGAATGCCTAAGAGCACTTGCAGATACTTGTT
JMFS090A11+ TTGAAATTTTGCTGAGCCTATCCTGCAAAGAGTGCCTAAGGGCACTTGCAGATACTTGTT
JMFS151G08+ GAGCCTATCCTGCAAAGAGTGCCTAAGGGCACTTGCAGATACTTGTT
JMFS166C06+ GAGCCTATCCTGCAAAGAGTGCCTAAGGGCACTTGCAGATACTTGTT
JMFS061A06+ TGAGCCTATCCTGCAAAGAGTGCCTAAGGGCACTTGCAGATACTTGTT
JMFS126G05+ TGAGCCTATCCTGCAAAGAGTGCCTAAGGGCACTTGCAGATACTTGTT
JMFS082C04+ AAGGGCACTTGCAGATACTTGTT
____________________________________________________________
consensus TTGAAATTTTGCTGAGCCTATCCTGCAAAGAGTGCCTAAGGGCACTTGCAGATACTTGTT
. : . : . : . : . : . :
JMFS030E02+ GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
JMFS047B02+ GAGGTTTACTGTCAATCTGCAACACTATTGATTTGCTGCTCAAAGAACTATCTCTTTTGA
JMFS090A11+ GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
JMFS151G08+ GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
JMFS166C06+ GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
JMFS061A06+ GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
JMFS126G05+ GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
JMFS082C04+ GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
____________________________________________________________
consensus GAGGTTTACTGTCAATCTGCAAAACTATTGACTTGCTACTCAAAGAACTATCCCGTTTGA
. : . : . : . : . : . :
JMFS030E02+ GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
JMFS047B02+ GATCAATACATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGCC
JMFS090A11+ GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
JMFS151G08+ GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
JMFS166C06+ GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
JMFS061A06+ GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
JMFS126G05+ GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
JMFS050E09+ CGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
JMFS082C04+ GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
____________________________________________________________
consensus GATCTATGCATATGGGGGCACGAGTAGCACCACCTTCACCAGTTGGCAAAGCAGGATGTC
. : . : . : . : . : . :
JMFS030E02+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAA
JMFS047B02+ CAATTAGACTATTTAATACAGCTGATTTACCGGCACCAGTGTTTCCGAGAGCAACGACAT
JMFS090A11+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
JMFS151G08+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
JMFS166C06+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
JMFS061A06+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
JMFS126G05+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
JMFS050E09+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
JMFS082C04+ CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
____________________________________________________________
consensus CAATTAAACTATTCAATACAGCTGATTTACCCGAACCCGTGTTGCCGAGAGCAACGACAT
. : . : . : . : . : . :
JMFS047B02+ TGAGGAAAGTC
JMFS090A11+ TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTC
JMFS151G08+ TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTCATCCACATCTTCGTCCGCGAGCA
JMFS166C06+ TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTCATCCACATCTTCGTCCGCGAGCA
JMFS061A06+ TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTCATCCACATCTTCGTCCGCGAGCA
JMFS126G05+ TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTCATCCACATCTTCGTCCGCGAGCA
JMFS050E09+ TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTCATCCACATCTTCGTCCGCGAGCA
JMFS082C04+ TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTCATCCACATCTTCGTCCGCGAGCA
____________________________________________________________
consensus TGAGAAATGTGGCCGGGCGTTTCGAAGATGAAACGTCATCCACATCTTCGTCCGCGAGCA
. : . : . : . : . : . :
JMFS151G08+ AGGCTGCAGCCTGCCGCATCGAATCAGACAGTTCAGACAACTCATCGATAGCGTCCATCC
JMFS166C06+ AGGCTGCAGCCTGCCGCATCGAATCAGACAGTTCAGACAACTCATCGATAGCGTCCATCC
JMFS061A06+ AGGCTGCAGCCTGCCGCATCGAATCAGACAGTTCAGACAACTCATCGATAGCGTCCATCC
JMFS126G05+ AGGCTGCAGCCTGCCGCATCGAATCAGACAGTTCAGACAACTCATCGATAGCGTCCATCC
JMFS050E09+ AGGCTGCAGCCTGCCGCATCGAATCAGACAGTTCAGACAACTCATCGATAGCGTCCATCC
JMFS082C04+ AGGCTGCAGCCTGCCGCATCGAATCAGACAGTTCAGACAACTCATCGATAGCGTCCATCC
____________________________________________________________
consensus AGGCTGCAGCCTGCCGCATCGAATCAGACAGTTCAGACAACTCATCGATAGCGTCCATCC
. : . : . : . : . : . :
JMFS151G08+ CTTGCTGCTCCCCAAATCAACTCCTCAACTCCAACTCAAACTACAAGCTCACTAGATCGC
JMFS166C06+ CTTGCTGCTCCCCAAATCAACTCCTCAACTCCAACTCAAACTACAAGCTCACTAGATCGC
JMFS061A06+ CTTGCTGCTCCCCAAATCAACTCCTCAACTCCAACTCAAACTACAAGCTCACTAGATCGC
JMFS126G05+ CTTGCTGCTCCCCAAATCAACTCCTCAACTCCAACTCAAACTACAAGCTCACTAGATCGC
JMFS050E09+ CTTGCTGCTCCCCAAATCAACTCCTCAACTCCAACTCAAACTACAAGCTCACTAGATCGC
JMFS082C04+ CTTGCTGCTCCCCAAATCAACTCCTCAACTCCAACTCAAACTACAAGCTCACTAGATCGC
____________________________________________________________
consensus CTTGCTGCTCCCCAAATCAACTCCTCAACTCCAACTCAAACTACAAGCTCACTAGATCGC
. : . : . : . : . : . :
JMFS151G08+ AACCAAATTGCAGAGATCCAGTGTGTGTATATAAATATATCTGTGTATAGATATATAGAT
JMFS166C06+ AACCAAATTGCAGAGATCCAGTGTGTGTATATAAATATATCTGTGTATAGATATATAGAT
JMFS061A06+ AACCAAATTGCAGAGATCCAGTGTGTGTATATAAATATATCTGTGTATAGATATATAGAT
JMFS126G05+ AACCAAATTGCAGAGATCCAGTGTGTGTATATAAATATATCTGTGTATAGATATATAGAT
JMFS050E09+ AACCAAATTGCAGAGATCCAGTGTGTGTATATAAATATATCTGTGTATAGATATATAGAT
JMFS082C04+ AACCAAATTGCAGAGATCCAGTGTGTGTATATAAATATATCTGTGTATAGATATATAGAT
____________________________________________________________
consensus AACCAAATTGCAGAGATCCAGTGTGTGTATATAAATATATCTGTGTATAGATATATAGAT
. : . : . : . : . : . :
JMFS151G08+ AGGGAAAGAAAACCCTAGATTCAGGGGAAGGACGGCGGAAACGTGTAAAGAGTGAGCAGG
JMFS166C06+ AGGGAAAGAAAACCCTAGATTCAGGGGAAGGACGGCGGAAACGTGTAAAGAGTGAGCAGG
JMFS061A06+ AGGGAAAGAAAACCCTAGATTCAGGGGAAGGACGGCGGAAACGTGTAAAGAGTGAGCAGG
JMFS126G05+ AGGGAAAGAAAACCCTAGATTCAGGGGAAGGACGGCGGAAACGTGTAAAGAGTGAGCAGG
JMFS050E09+ AGGGAAAGAAAACCCTAGATTCAGGGGAAGGACGGCGGAAACGTGTAAAGAGTGAGCAGG
JMFS082C04+ AGGGAAAGAAAACCCTAGATTCAGGGGAAGGACGGCGGAAACGTGTAAAGAGTGAGCAGG
____________________________________________________________
consensus AGGGAAAGAAAACCCTAGATTCAGGGGAAGGACGGCGGAAACGTGTAAAGAGTGAGCAGG
. : . : . : . : . : . :
JMFS151G08+ GTTTTCCGGTGGAAAGGATGGGAGATTCAGAAGATTGGGAAACAGCGTAGAGAGAGGGAG
JMFS166C06+ GTTTTCCGGTGGAAAGGATGGGAGATTCAGAAGATTGGGAAACAGCGTAGAGAGAGGGAG
JMFS061A06+ GTTTTCCGGTGGAAAGGATGGGAGATTCAGAAGATTGGGAAACAGCGTAGAGAGAGGGAG
JMFS126G05+ GTTTTCCGGTGGAAAGGATGGGAGATTCAGAAGATTGGGAAACAGCGTAGAGAGAGGGAG
JMFS050E09+ GTTTTCCGGTGGAAAGGATGGGAGATTCAGAAGATTGGGAAACAGCGTAGAGAGAGGGAG
JMFS082C04+ GTTTTCCGGTGGAAAGGATGGGAGATTCAGAAGATTGGGAAACAGCGTAGAGAGAGGGAG
____________________________________________________________
consensus GTTTTCCGGTGGAAAGGATGGGAGATTCAGAAGATTGGGAAACAGCGTAGAGAGAGGGAG
. : . : . : . : . : . :
JMFS151G08+ AGTGGATGGTTGAAAGTTGAAATGGA
JMFS166C06+ AGTGGATGGTTGAAAGTTGAAATGG
JMFS061A06+ AGTGGATGGTTGAAAGTTGAAATGGA
JMFS126G05+ AGTGGATGGTTGAAAGTTGAAATGGAGGCTTTCA
JMFS050E09+ AGTGGATGGTTGAAAGTTGAAATGGAGGCTTTCA
JMFS082C04+ AGTGGATGGTTGAAAGTTGAAATGGAGGCTTTCACAACCAGCACAGAGAGAGAGAGAGAG
____________________________________________________________
consensus AGTGGATGGTTGAAAGTTGAAATGGAGGCTTTCACAACCAGCACAGAGAGAGAGAGAGAG