Contig 003423:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045A15Sequence484003423 (9)gb|KDO58458.1|2e-23hypothetical protein CISIN_1g045893mg [Citrus sinensis]512012438 (8)ref|XP_008462107.1|2e-33PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis melo]
JMFN037I23Sequence607003423 (9)ref|XP_008342227.1|2e-30PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica]
JMFS037F05Sequence595003423 (9)ref|XP_010038560.1|3e-21PREDICTED: exopolygalacturonase [Eucalyptus grandis]
JMFS073D10Sequence642003423 (9)emb|CDX80531.1|2e-42BnaC07g29130D [Brassica napus]
JMFS080F03Sequence608003423 (9)ref|XP_008342227.1|2e-30PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica]
JMFS080G02Sequence624003423 (9)ref|XP_008342227.1|3e-33PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica]
JMFS102F12Sequence597003423 (9)ref|XP_006856225.1|2e-34hypothetical protein AMTR_s00059p00207430 [Amborella trichopoda] gb|ERN17692.1|
JMFS135G05Sequence630003423 (9)ref|XP_008342227.1|2e-32PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica]
JMFS144A03Sequence623003423 (9)emb|CDX80531.1|5e-42BnaC07g29130D [Brassica napus]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS080F03+ TGCATTGTATCA
JMFS135G05+ TGTATCA
JMFN037I23+ TGCATTGTATCA
JMFS144A03+ CAACGTCAGGTTCTTGCATTGTATCA
JMFS080G02+ TTCAACGTCAGGTTCTTGCATTGTATCA
                      ____________________________________________________________
consensus TTCAACGTCAGGTTCTTGCATTGTATCA
 
. : . : . : . : . : . :
JMFS080F03+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
JMFS135G05+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
JMFN037I23+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
JMFS102F12+ AAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGAGTTCGTCA
JMFS144A03+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGAGTTCGTCA
JMFF045A15+ TTATTCCTTTCACCACCGCGTTCGTCA
JMFS080G02+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
                      ____________________________________________________________
consensus CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
 
. : . : . : . : . : . :
JMFS080F03+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS037F05+ AATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS135G05+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFN037I23+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS073D10+ AATGGGGAGGTTTTTACAAAGGGGAGCATTCATATTCTCCT
JMFS102F12+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGAGCATTCATATTCTCCT
JMFS144A03+ ACGTACCCAAGTTAATGTTAATGGGGAGGTTTTTACAAAGGGGAGCATTCATATTCTCCT
JMFF045A15+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS080G02+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
                      ____________________________________________________________
consensus ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
 
. : . : . : . : . : . :
JMFS080F03+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS037F05+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS135G05+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFN037I23+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS073D10+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS102F12+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS144A03+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFF045A15+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS080G02+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
                      ____________________________________________________________
consensus TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
 
. : . : . : . : . : . :
JMFS080F03+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
JMFS037F05+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTAAGAT
JMFS135G05+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTAAGAT
JMFN037I23+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
JMFS073D10+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
JMFS102F12+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
JMFS144A03+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
JMFF045A15+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
JMFS080G02+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
                      ____________________________________________________________
consensus TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
 
. : . : . : . : . : . :
JMFS080F03+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS037F05+ CAGTTGGCGCGATCAATTTAGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS135G05+ CAGTTGGCGCGATCAATTTAGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFN037I23+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS073D10+ CGGTTGGCGCGATAAATTTGGCACCTTCCGCCGCATCAAATGTTACGGCACTCTTACAAG
JMFS102F12+ CGGTTGGCGCGATAAATTTGGCACCTTCCGCCGCATCAAATGTTACGGCACTCTTACAAG
JMFS144A03+ CGGTTGGCGCGATAAATTTGGCACCTTCCGCCGCATCAAATGTTACGGCACTCTTACAAG
JMFF045A15+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS080G02+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
                      ____________________________________________________________
consensus CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
 
. : . : . : . : . : . :
JMFS080F03+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS037F05+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS135G05+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFN037I23+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS073D10+ GACCTAGAAACCCAATCTGACCCAACATATACTTGCCTTTCGGAACCTTGAGCGTGCTCG
JMFS102F12+ GACCTAGAAACCCAATCTGACCCAACATATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS144A03+ GACCTAGAAACCCAATCTGACCCAACATATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFF045A15+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS080G02+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
                      ____________________________________________________________
consensus GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
 
. : . : . : . : . : . :
JMFS080F03+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS037F05+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS135G05+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFN037I23+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS073D10+ GCTCTGTCCCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCAAT
JMFS102F12+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCAAT
JMFS144A03+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCAAT
JMFF045A15+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS080G02+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
                      ____________________________________________________________
consensus GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
 
. : . : . : . : . : . :
JMFS080F03+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS037F05+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS135G05+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFN037I23+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS073D10+ CCCCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTACTGTTGCTA
JMFS102F12+ CCCCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTACTGTTGCTA
JMFS144A03+ CCCCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTACTGTTGCTA
JMFF045A15+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS080G02+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
                      ____________________________________________________________
consensus CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
 
. : . : . : . : . : . :
JMFS080F03+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
JMFS037F05+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTCTT
JMFS135G05+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
JMFN037I23+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTCTT
JMFS073D10+ CAAGATATGCCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATC
JMFS102F12+ CAAGATATGCCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATC
JMFS144A03+ CAAGATATGCCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC
JMFF045A15+ CAAGATATGTCACATAGAAAAAAATCA
JMFS080G02+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
                      ____________________________________________________________
consensus CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
 
. : . : . : . : . : . :
JMFS080F03+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTT
JMFS037F05+ TTTTTTTTTTTGT
JMFS135G05+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTT
JMFN037I23+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTT
JMFS080G02+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTTCCTTTATACAGCTGGTTGAGATACA
                      ____________________________________________________________
consensus TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTTCCTTTATACAGCTGGTTGAGATACA