| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045A15 | Sequence | 484 | 003423 (9) | gb|KDO58458.1| | 2e-23 | hypothetical protein CISIN_1g045893mg [Citrus sinensis] | 512 | 012438 (8) | ref|XP_008462107.1| | 2e-33 | PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis melo] |
| JMFN037I23 | Sequence | 607 | 003423 (9) | ref|XP_008342227.1| | 2e-30 | PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica] | |||||
| JMFS037F05 | Sequence | 595 | 003423 (9) | ref|XP_010038560.1| | 3e-21 | PREDICTED: exopolygalacturonase [Eucalyptus grandis] | |||||
| JMFS073D10 | Sequence | 642 | 003423 (9) | emb|CDX80531.1| | 2e-42 | BnaC07g29130D [Brassica napus] | |||||
| JMFS080F03 | Sequence | 608 | 003423 (9) | ref|XP_008342227.1| | 2e-30 | PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica] | |||||
| JMFS080G02 | Sequence | 624 | 003423 (9) | ref|XP_008342227.1| | 3e-33 | PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica] | |||||
| JMFS102F12 | Sequence | 597 | 003423 (9) | ref|XP_006856225.1| | 2e-34 | hypothetical protein AMTR_s00059p00207430 [Amborella trichopoda] gb|ERN17692.1| | |||||
| JMFS135G05 | Sequence | 630 | 003423 (9) | ref|XP_008342227.1| | 2e-32 | PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica] | |||||
| JMFS144A03 | Sequence | 623 | 003423 (9) | emb|CDX80531.1| | 5e-42 | BnaC07g29130D [Brassica napus] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS080F03+ TGCATTGTATCA
JMFS135G05+ TGTATCA
JMFN037I23+ TGCATTGTATCA
JMFS144A03+ CAACGTCAGGTTCTTGCATTGTATCA
JMFS080G02+ TTCAACGTCAGGTTCTTGCATTGTATCA
____________________________________________________________
consensus TTCAACGTCAGGTTCTTGCATTGTATCA
. : . : . : . : . : . :
JMFS080F03+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
JMFS135G05+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
JMFN037I23+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
JMFS102F12+ AAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGAGTTCGTCA
JMFS144A03+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGAGTTCGTCA
JMFF045A15+ TTATTCCTTTCACCACCGCGTTCGTCA
JMFS080G02+ CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
____________________________________________________________
consensus CATTCATGTGGAAAAACTTGCTGTCCACAGACTTTATTCCTTTCACCACCGCGTTCGTCA
. : . : . : . : . : . :
JMFS080F03+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS037F05+ AATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS135G05+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFN037I23+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS073D10+ AATGGGGAGGTTTTTACAAAGGGGAGCATTCATATTCTCCT
JMFS102F12+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGAGCATTCATATTCTCCT
JMFS144A03+ ACGTACCCAAGTTAATGTTAATGGGGAGGTTTTTACAAAGGGGAGCATTCATATTCTCCT
JMFF045A15+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
JMFS080G02+ ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
____________________________________________________________
consensus ACGTACCCAAGTTCATGTTAATGGGGAGGTTTTTACAAAGGGGATTATTCATATTCTCCT
. : . : . : . : . : . :
JMFS080F03+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS037F05+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS135G05+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFN037I23+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS073D10+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS102F12+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS144A03+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFF045A15+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
JMFS080G02+ TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
____________________________________________________________
consensus TACACTTGTTTATCTTCCAGGCGGCGGAACCTTGGCCGTTATAAGTACCGCCGGAGAGCG
. : . : . : . : . : . :
JMFS080F03+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
JMFS037F05+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTAAGAT
JMFS135G05+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTAAGAT
JMFN037I23+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
JMFS073D10+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
JMFS102F12+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
JMFS144A03+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
JMFF045A15+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
JMFS080G02+ TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGATTGAGAT
____________________________________________________________
consensus TAAAGTCTTTAATCATGCTGAACAAAATCCATCCATCTTTTGTTTTGAACTGACTGAGAT
. : . : . : . : . : . :
JMFS080F03+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS037F05+ CAGTTGGCGCGATCAATTTAGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS135G05+ CAGTTGGCGCGATCAATTTAGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFN037I23+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS073D10+ CGGTTGGCGCGATAAATTTGGCACCTTCCGCCGCATCAAATGTTACGGCACTCTTACAAG
JMFS102F12+ CGGTTGGCGCGATAAATTTGGCACCTTCCGCCGCATCAAATGTTACGGCACTCTTACAAG
JMFS144A03+ CGGTTGGCGCGATAAATTTGGCACCTTCCGCCGCATCAAATGTTACGGCACTCTTACAAG
JMFF045A15+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
JMFS080G02+ CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
____________________________________________________________
consensus CAGTTGGCGCGATCAATTTGGCACCTT---CCGCATCAAATGTTACGGCACTCTTACAAG
. : . : . : . : . : . :
JMFS080F03+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS037F05+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS135G05+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFN037I23+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS073D10+ GACCTAGAAACCCAATCTGACCCAACATATACTTGCCTTTCGGAACCTTGAGCGTGCTCG
JMFS102F12+ GACCTAGAAACCCAATCTGACCCAACATATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS144A03+ GACCTAGAAACCCAATCTGACCCAACATATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFF045A15+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
JMFS080G02+ GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
____________________________________________________________
consensus GACCTAGAAACCCAATCTGACCCAACCTATACTTGCCTTCCGGAACCTTGAGCGTGCTCG
. : . : . : . : . : . :
JMFS080F03+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS037F05+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS135G05+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFN037I23+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS073D10+ GCTCTGTCCCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCAAT
JMFS102F12+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCAAT
JMFS144A03+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCAAT
JMFF045A15+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
JMFS080G02+ GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
____________________________________________________________
consensus GCTCTGTCGCTTTGCATACCTCATCCCAAGCTTTCTTAAAAGCCGCAGTATCATCGCCAT
. : . : . : . : . : . :
JMFS080F03+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS037F05+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS135G05+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFN037I23+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS073D10+ CCCCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTACTGTTGCTA
JMFS102F12+ CCCCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTACTGTTGCTA
JMFS144A03+ CCCCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTACTGTTGCTA
JMFF045A15+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
JMFS080G02+ CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
____________________________________________________________
consensus CGTCATCACCTTTTGCACCAGATGTTTTAACGTTAACTTCAACGCCCTGTATTGTTGCTA
. : . : . : . : . : . :
JMFS080F03+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
JMFS037F05+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTCTT
JMFS135G05+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
JMFN037I23+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTCTT
JMFS073D10+ CAAGATATGCCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATC
JMFS102F12+ CAAGATATGCCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATC
JMFS144A03+ CAAGATATGCCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC
JMFF045A15+ CAAGATATGTCACATAGAAAAAAATCA
JMFS080G02+ CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
____________________________________________________________
consensus CAAGATATGTCACATAGAAAAAAATCAATGCAGCTTGAATCGCATTGGAACCCATCTC-T
. : . : . : . : . : . :
JMFS080F03+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTT
JMFS037F05+ TTTTTTTTTTTGT
JMFS135G05+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTT
JMFN037I23+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTT
JMFS080G02+ TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTTCCTTTATACAGCTGGTTGAGATACA
____________________________________________________________
consensus TTTTTTTTTTTTGTGTATTTATTTTATTTTATTTTCCTTTATACAGCTGGTTGAGATACA