Contig 003421:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008M07Sequence580003421 (8)ref|XP_009776303.1|6e-73PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMFS077B01Sequence630003421 (8)ref|XP_009776303.1|1e-54PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMSF002P03Sequence296000968 (6)gb|KCW54638.1|2e-19hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]692003421 (8)ref|XP_009776303.1|4e-81PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMSF006J10Sequence416003421 (8)gb|ABR25558.1|3e-20serine hydroxymethyltransferase mitochondrial precursor [Oryza sativa Indica Gr
JMSF041O24Sequence800000968 (6)gb|KCW54638.1|9e-145hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]747003421 (8)ref|XP_009776303.1|2e-103PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMSF042O11Sequence718000968 (6)gb|KCW54638.1|1e-128hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]495003421 (8)ref|XP_009776303.1|1e-25PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve
JMSF045P02Sequence746000968 (6)gb|KCW54638.1|1e-125hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]698003421 (8)ref|XP_009597687.1|2e-55PREDICTED: serine hydroxymethyltransferase, mitochondrial isoform X2 [Nicotiana
JMSF047O08Sequence668000968 (6)gb|KCW54638.1|3e-101hypothetical protein EUGRSUZ_I00580 [Eucalyptus grandis]766003421 (8)ref|XP_009776303.1|5e-101PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Nicotiana sylve

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047O08+ TGAAGCAG
                      ____________________________________________________________
consensus TGAAGCAG
 
. : . : . : . : . : . :
rJMSF041O24+ TACCAAGAGCAAGTCCTCAGTAACTGCTCAAAATTTG
rJMSF047O08+ GCAACGACTCCCGAATACAGAGCTACCAAGAGCAAGTCCTCAGTAACTGCTCAAAATTTG
                      ____________________________________________________________
consensus GCAACGACTCCCGAATACAGAGCTACCAAGAGCAAGTCCTCAGTAACTGCTCAAAATTTG
 
. : . : . : . : . : . :
rJMSF041O24+ CACAGACTTTGGTTGAGAAGGGCTATGAACTGGTTTCTGGTGGAACTGAGAACCATTTGG
rJMSF047O08+ CACAGACTTTGGTTGAGAAGGGCTATGAACTGGTTTCTGGTGGAACTGAGAACCATTTGG
                      ____________________________________________________________
consensus CACAGACTTTGGTTGAGAAGGGCTATGAACTGGTTTCTGGTGGAACTGAGAACCATTTGG
 
. : . : . : . : . : . :
rJMSF041O24+ TGTTGGTGAATCTGAAAAACAAGGGAATTGATGGTTCCAGAGTTGAAAAGGTGCTGGAAT
JMFN008M07- AAACAAGGGAATTGATGGTTCCAGAGTTGAAAAGGTGCTGGAAT
rJMSF047O08+ TGTTGGTGAATCTGAAAAACAAGGGAATTGATGGTTCCAGAGTTGAAAAGGTGCTGGAAT
                      ____________________________________________________________
consensus TGTTGGTGAATCTGAAAAACAAGGGAATTGATGGTTCCAGAGTTGAAAAGGTGCTGGAAT
 
. : . : . : . : . : . :
rJMSF041O24+ CTGTCCACATTGCAGCCAACAAGAACACAGTTCCCGGGGACGTTTCTGCAATGGTTCCTG
JMFN008M07- CTGTCCACATTGCAGCCAACAAGAACACAGTTCCCGGGGACGTTTCTGCAATGGTTCCTG
rJMSF047O08+ CTGTCCACATTGCAGCCAACAAGAACACAGTTCCCGGGGACGTTTCTGCAATGGTTCCTG
JMFS077B01+ AGTTCCCGGGGACGTTTCTGCAATGGTTCCTG
                      ____________________________________________________________
consensus CTGTCCACATTGCAGCCAACAAGAACACAGTTCCCGGGGACGTTTCTGCAATGGTTCCTG
 
. : . : . : . : . : . :
rJMSF041O24+ GTGGCATTAGAATGGGAACTCCTGCTCTTACCTCCAGGGGATTCGTCGAGGAAGACTTTG
JMFN008M07- GTGGCATTAGAATGGGAACTCCTGCTCTTACCTCCAGGGGATTCGTCGAGGAAGACTTTG
rJMSF047O08+ GTGGCATTAGAATGGGAACTCCTGCTCTTACCTCCAGGGGATTCGTCGAGGAAGACTTTG
rJMSF002P03+ GGAACTCCTGCTCTTACCTCCAGGGGATTCGTCGAGGAAGACTTTG
rJMSF045P02+ GGAACTCCTGCTCTTACCTCCAGGGGATTCGTCGAGGAAGACTTTG
rJMSF042O11+ GGATTCGTCGAGGAAGACTTTG
JMFS077B01+ GTGGCATTAGAATGGGAACTCCTGCTCTTACCTCCAGGGGATTCGTCGAGGAAGACTTTG
                      ____________________________________________________________
consensus GTGGCATTAGAATGGGAACTCCTGCTCTTACCTCCAGGGGATTCGTCGAGGAAGACTTTG
 
. : . : . : . : . : . :
rJMSF041O24+ TGAAAGTTGCAGAATACTTCGACGCAGCAGTGAAGTTATCTGTCAAAATAAAGGCTGCAA
JMFN008M07- TGAAAGTTGCAGAATACTTCGACGCAGCAGTGAAGTTATCTGTCAAAATAAAGGCTGCAA
rJMSF006J10+ CTGCAA
rJMSF047O08+ TGAAAGTTGCAGAATACTTCGACGCAGCAGTGAAGTTATCTGTCAAAATAAAGGCTGCAA
rJMSF002P03+ TGAAAGTTGCAGAATACTTCGACGCAGCAGTGAAGTTATCTGTCAAAATAAAGGCTGCAA
rJMSF045P02+ TGAAAGTTGCAGAATACTTCGACGCAGCAGTGAAGTTATCTGTCAAAATAAAGGCTGCAA
rJMSF042O11+ TGAAAGTTGCAGAATACTTCGACGCAGCAGTG-AGTTATCTGTCAAAATAAAGGCTGCAA
JMFS077B01+ TGAAAGTTGCAGAATACTTCGACGCAGCAGTGAAGTTATCTGTCAAAATAAAGGCTGCAA
                      ____________________________________________________________
consensus TGAAAGTTGCAGAATACTTCGACGCAGCAGTGAAGTTATCTGTCAAAATAAAGGCTGCAA
 
. : . : . : . : . : . :
rJMSF041O24+ CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
JMFN008M07- CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
rJMSF006J10+ CTCAAGGCACGAAATNGAAAGAATTTGTGGCCCCCCTGCAGTCCAGTGATGCAATCCAGG
rJMSF047O08+ CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
rJMSF002P03+ CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
rJMSF045P02+ CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
rJMSF042O11+ CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
JMFS077B01+ CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
                      ____________________________________________________________
consensus CTCAAGGCACGAAATTGAAAGAATTTGTGGCCACCCTGCAGTCCAGTGATGCAATCCAGG
 
. : . : . : . : . : . :
rJMSF041O24+ CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
JMFN008M07- CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
rJMSF006J10+ CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
rJMSF047O08+ CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
rJMSF002P03+ CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
rJMSF045P02+ CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
rJMSF042O11+ CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
JMFS077B01+ CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
                      ____________________________________________________________
consensus CTGAGATTGCAAAGCTGCGCCATGATGTGGAGGAGTATGCAAAGCAGTTCCCCACGATCG
 
. : . : . : . : . : . :
rJMSF041O24+ GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
JMFN008M07- GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGT
rJMSF006J10+ GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
rJMSF047O08+ GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
rJMSF002P03+ GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
rJMSF045P02+ GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
rJMSF042O11+ GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
JMFS077B01+ GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
                      ____________________________________________________________
consensus GGTTCGAGAAACACACCATGAAGTACAAGAACTGAGAACATCATGCGCCGTCCCAGGTAG
 
. : . : . : . : . : . :
rJMSF041O24+ ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
rJMSF006J10+ ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
rJMSF047O08+ ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
rJMSF002P03+ ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
rJMSF045P02+ ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
rJMSF042O11+ ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
JMFS077B01+ ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
                      ____________________________________________________________
consensus ATTCCATGATGTTCTTTAAGGAGAATGCTGTGTTGTTGGTGACTAGTTCCAACCCAATCG
 
. : . : . : . : . : . :
rJMSF041O24+ TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
rJMSF006J10+ TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
rJMSF047O08+ TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
rJMSF002P03+ TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
rJMSF045P02+ TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
rJMSF042O11+ TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
JMFS077B01+ TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
                      ____________________________________________________________
consensus TTTCTTATCAAAGTTCGTGTCTTTAAAGGTTGCAGGCAGTGAGTGCATCAATGTCATAAA
 
. : . : . : . : . : . :
rJMSF041O24+ GGTTAA-CAGGGAAGAAATCCAGTTA-CTGGTTTATTATTATGTAAAATCAATGCTGAAG
rJMSF006J10+ GGTTAACCAGGGAAGAAATCCAGTTATCTGGTTTATTATTATGTAAAATCAATGCTGAAG
rJMSF047O08+ GGTTAA-CAGGGAAGAAATCCAGTTA-CTGGTTTATTATTATGTAAAATCAATGCTGAAG
rJMSF002P03+ GGTTAA-CAGGGAAGAAATCCAGTTA-CTGGTTTATTATTATGTAAAATCAATGCTGAAG
rJMSF045P02+ GGTTAA-CAGGGAAGAAATCCAGTTA-CTGGTTTATTATTATGTAAAATCAATGCTGAAG
rJMSF042O11+ GGTTAA-CAGGGAAGAAATCCAGTTA-CTGGTTTATTATTATGTAAAATCAATGCTGAAG
JMFS077B01+ GGTTAA-CAGGGAAGAAATCCAGTTA-CTGGTTTATTATTATGTAAAATCAATGCTGAAG
                      ____________________________________________________________
consensus GGTTAA-CAGGGAAGAAATCCAGTTA-CTGGTTTATTATTATGTAAAATCAATGCTGAAG
 
. : . : . : . : . : . :
rJMSF041O24+ ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCATG
rJMSF006J10+ ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCAT
rJMSF047O08+ ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCATG
rJMSF002P03+ ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCATGTACACAACCTCAGATCCATG
rJMSF045P02+ ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCAT
rJMSF042O11+ ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCATGTACACAACCTCAGATC
JMFS077B01+ ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCATGTACACAACCTCAGATCCATG
                      ____________________________________________________________
consensus ATTTTAGCTTCCTTGCTTGCTAATGTATACACCCATCATGTACACAACCTCAGATCCATG
 
. : . : . : . : . : . :
rJMSF002P03+ AATAATGCCACAATTC
JMFS077B01+ AATAATGCCACAATTCTATATTTTGCTTCAAAAAAAAAAAAAAAAAACTGAACTAGTTCC
                      ____________________________________________________________
consensus AATAATGCCACAATTCTATATTTTGCTTCAAAAAAAAAAAAAAAAAACTGAACTAGTTCC