Contig 003419:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS076A03Sequence305003419 (4)
JMSF001H19Sequence403006337 (10)dbj|BAF00508.1|1e-07hypothetical protein [Arabidopsis thaliana]737003419 (4)ref|XP_009602456.1|1e-33PREDICTED: phosphoinositide phosphatase SAC4-like [Nicotiana tomentosiformis]
JMSF008F09Sequence468006337 (10)ref|XP_004510555.1|3e-05PREDICTED: LOW QUALITY PROTEIN: phosphoinositide phosphatase SAC2-like [Cicer a715003419 (4)ref|XP_009602456.1|4e-30PREDICTED: phosphoinositide phosphatase SAC4-like [Nicotiana tomentosiformis]
JMSF043P08Sequence717006337 (10)ref|XP_011072674.1|5e-85PREDICTED: phosphoinositide phosphatase SAC2 [Sesamum indicum]702003419 (4)ref|XP_009602456.1|3e-29PREDICTED: phosphoinositide phosphatase SAC4-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF001H19+                                                                CCATTA
                      ____________________________________________________________
consensus                                                                   CCATTA
 
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rJMSF001H19+          CCTGTTGAGTCCACACCTGATGTCTCAACATGTGAGAGCGAAATGTCATATTCCAGGTAT
rJMSF043P08+                                      CATGTGAGAGCGAAATGTCATATTCCAGGTAT
rJMSF008F09+                                      CATGTGAGAGCGAAATGTCATATTCCAGGTAT
                      ____________________________________________________________
consensus             CCTGTTGAGTCCACACCTGATGTCTCAACATGTGAGAGCGAAATGTCATATTCCAGGTAT
 
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rJMSF001H19+          ACCCCCACTATGTCTGGTAGGGAGCTCTTCTCCGAAACCCAAGGTGAGCAGACTCTTGAA
rJMSF043P08+          ACCCCCACTATGTCTGGTAGGGAGCTCTTCTCCGAAACCCAAGGTGAGCAGACTCTTGAA
rJMSF008F09+          ACCCCCACTATGTCTGGTAGGGAGCTCTTCTCCGAAACCCAAGGTGAGCAGACTCTTGAA
                      ____________________________________________________________
consensus             ACCCCCACTATGTCTGGTAGGGAGCTCTTCTCCGAAACCCAAGGTGAGCAGACTCTTGAA
 
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rJMSF001H19+          CGTTGGGATTCCAACTTCTCGAATTTTGTAGATGTCGAGTGGCTTTCTTCGTCTGGAAAT
rJMSF043P08+          CGTGGGGATTCCAACTTCTCGAATTTTGTAGATGTCGAGTGGCTTTCTTCGTCTGGAAAT
rJMSF008F09+          CGTGGGGATTCCAACTTCTCGAATTTTGTAGATGTCGAGTGGCTTTCTTCGTCTGGAAAT
                      ____________________________________________________________
consensus             CGTGGGGATTCCAACTTCTCGAATTTTGTAGATGTCGAGTGGCTTTCTTCGTCTGGAAAT
 
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rJMSF001H19+          TCATGTGAAGAAGAGACATATGAGAGATCGTCAGTCGTAGGTTCCCCATCCAGTGGTCTT
rJMSF043P08+          TCATGTGAAGAAGAGACATATGAGAGATCGTCAGTCGTAGGTTCCCCATCCAGTGGTCTT
rJMSF008F09+          TTATGTGAAGAAGAGACATATGAGAGATCGTCAGTCGTAGGTTCCCCATCCAGTGGTCTT
                      ____________________________________________________________
consensus             TCATGTGAAGAAGAGACATATGAGAGATCGTCAGTCGTAGGTTCCCCATCCAGTGGTCTT
 
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rJMSF001H19+          TCGTCAGAAGGCCTTGGATGCGCGTCTAAAGCAGAAACGAGCCTTCATGCCTACGACTCT
rJMSF043P08+          TCGTCAGAAGGCCTTGGATGCGCGTCTAAAGCAGAAACGAGCCTTCATGCCTACGACTCT
rJMSF008F09+          TCGTCAGAAGGCCTTGGATGCGCGTCTAAAGCAGAAACGAGCCTTCATGCCTACGACTCT
                      ____________________________________________________________
consensus             TCGTCAGAAGGCCTTGGATGCGCGTCTAAAGCAGAAACGAGCCTTCATGCCTACGACTCT
 
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rJMSF001H19+          GGATTTAGTATTAAGACTACTGGAGATCTGAATTTCGAAATGGTTCAAGAAATCCATTGC
rJMSF043P08+          GGATTTAGTATTAAGACTACTGGAGATCTGAATTTCGAAATGGTTCAAGAAATCCATTGC
rJMSF008F09+          GGATTTAGTATTAAGACTACTGGAGATCTGAATTTCGAAATGGTTCAAGAAATCCATTGC
                      ____________________________________________________________
consensus             GGATTTAGTATTAAGACTACTGGAGATCTGAATTTCGAAATGGTTCAAGAAATCCATTGC
 
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rJMSF001H19+          CCGGGTGAATTTTCTGATAAATTTGTGCACTGGGTTACATTTGGAGACATGCTCTTCCCC
rJMSF043P08+          CCGGGTGAATTTTCTGATAAATTTGTGCACTGGGTTACATTTGGAGACATGCTCTTCCCC
rJMSF008F09+          CCGGGTGAATTTTCTGATAAATTTGTGCACTGGGTTACATTTGGAGACATGCTCTTCCCC
                      ____________________________________________________________
consensus             CCGGGTGAATTTTCTGATAAATTTGTGCACTGGGTTACATTTGGAGACATGCTCTTCCCC
 
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rJMSF001H19+          TGATGATGTGTTGGGGCTTCCTGACGCGCTAAATCCGTTTAAGACCGTACCCCGATTCAA
rJMSF043P08+          TGATGATGTGTTGGGGCTTCCTGACGCGCTAAATCCGTTTAAGACCGTACCCCGATTCAA
rJMSF008F09+          TGATGATGTGTTGGGGCTTCCTGACGCGCTAAATCCGTTTAAGACCGTACCCCGATTCAA
JMFS076A03-                                                                  TTCAA
                      ____________________________________________________________
consensus             TGATGATGTGTTGGGGCTTCCTGACGCGCTAAATCCGTTTAAGACCGTACCCCGATTCAA
 
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rJMSF001H19+          TCAACCCATCCGAAGGATGCGGGTTACTGATACAATAAATTTACCGGCTACCAAGGTTAG
rJMSF043P08+          TCAACCCATCCGAAGGATGCGGGTTACTGATACAATAAATTTACCGGCTACCAAGGTTAG
rJMSF008F09+          TCAACCCATCCGAAGGATGCGGGTTACTGATACAATAAATTTACCGGCTACCAAGGTTAG
JMFS076A03-           TCAACCCATCCGAAGGATGCGGGTTACTGATACAATAAATTTACCGGCTACCAAGGTTAG
                      ____________________________________________________________
consensus             TCAACCCATCCGAAGGATGCGGGTTACTGATACAATAAATTTACCGGCTACCAAGGTTAG
 
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rJMSF001H19+          AGATTTGAGAAAATATTGAATTTTTTGGTTACTGACAGATATGCCAAAAGAAAGCCATGG
rJMSF043P08+          AGATTTGAGAAAATATTGAATTTTTTGGTTACTGACAGATATGCCAAAAGAAAGCCATGG
rJMSF008F09+          AGATTTGAGAAAATATTGAATTTTTTGGTTACTGACAGATATGCCAAAAGAAAGCCATGG
JMFS076A03-           AGATTTGAGAAAATATTGAATTTTTTGGTTACTGACAGATATGCCAAAAGAAAGCCATGG
                      ____________________________________________________________
consensus             AGATTTGAGAAAATATTGAATTTTTTGGTTACTGACAGATATGCCAAAAGAAAGCCATGG
 
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rJMSF001H19+          TGGATCTGCATCTTTATTTATTCATAGTCTAGTCCCCTTAGATAGGAACCCAAAAGTAAA
rJMSF043P08+          TGGATCTGCATCTTTATTTATTCATAGTCTAGTCCCCTTAGATAGGAACCCAAAAGTAAA
rJMSF008F09+          TGGATCTGCATCTTTATTTATTCATAGTCTAGTCCCCTTAGATAGGAACCCAAAAGTAAA
JMFS076A03-           TGGATCTGCATCTTTATTTATTCATAGTCTAGTCCCCTTAGATAGGAACCCAAAAGTAAA
                      ____________________________________________________________
consensus             TGGATCTGCATCTTTATTTATTCATAGTCTAGTCCCCTTAGATAGGAACCCAAAAGTAAA
 
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rJMSF001H19+          TATCCTGCGTATTCTTTCTGGGACTCCTTGTTCCCATGCTTGCTAACAATTGTCAAACGT
rJMSF043P08+          TATCCTGCGTATTCTTTCTGGGACTCCTTGTTCCCATGCTTGCTAAC             
rJMSF008F09+          TATCCTGCGTATTCTTTCTGGGACTCCTTGTTCCCATGCTTGCTAACAATTGTCAAACGT
JMFS076A03-           TATCCTGCGTATTCTTTCTGGGACTCCTTGTTCCCATGCTTGCTAACAATTGTCAAACGT
                      ____________________________________________________________
consensus             TATCCTGCGTATTCTTTCTGGGACTCCTTGTTCCCATGCTTGCTAACAATTGTCAAACGT
 
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rJMSF001H19+          TACTCAATTTT                                                 
rJMSF008F09+          TACTCAATTTT                                                 
JMFS076A03-           TACTCAATTTTGTATATATCCAACATCTTTGGTCATAAATCCCAGCTTGGTTTTGCAGTT
                      ____________________________________________________________
consensus             TACTCAATTTTGTATATATCCAACATCTTTGGTCATAAATCCCAGCTTGGTTTTGCAGTT