Contig 003407:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P12Sequence542003407 (9)ref|XP_009611045.1|8e-29PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi714008132 (7)ref|XP_009611045.1|3e-80PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMFF006I15Sequence542003407 (9)gb|AFK40961.1|2e-30unknown [Lotus japonicus]791008132 (7)ref|XP_009611045.1|2e-97PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMFS055C02Sequence627003407 (9)ref|XP_004512162.1|3e-45PREDICTED: cell number regulator 13-like isoform X6 [Cicer arietinum]
JMSF006I21Sequence349003407 (9)
JMSF015I01Sequence432003407 (9)ref|XP_004512162.1|7e-06PREDICTED: cell number regulator 13-like isoform X6 [Cicer arietinum]752008132 (7)ref|XP_009611045.1|5e-86PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMSF016P12Sequence412003407 (9)ref|XP_003612221.1|6e-12hypothetical protein MTR_5g022670 [Medicago truncatula] gb|AES95179.1| MID1-comp781008132 (7)ref|XP_009611045.1|9e-109PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMSF023B18Sequence661003407 (9)ref|NP_001242304.1|2e-55uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci768008132 (7)ref|XP_009611045.1|2e-106PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMSF023H01Sequence664003407 (9)ref|NP_001242304.1|7e-58uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci641008132 (7)dbj|BAK32933.1|6e-76mid1-complementing activity 2 [Nicotiana tabacum]
JMSF039K24Sequence661003407 (9)ref|NP_001242304.1|2e-56uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci873008132 (7)ref|XP_009611045.1|2e-115PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF023B18+ ATCCCATAGCCAACA
JMSF039K24+ ATCCCATAGCCAACA
JMSF023H01+ TCCATCCCATAGCCAACA
                      ____________________________________________________________
consensus TCCATCCCATAGCCAACA
 
. : . : . : . : . : . :
JMSF023B18+ GATAAAGATAGCTCCTGTCTTGGCAACTGTTAATCAGAATATAGGACCTTCTCAATGCAT
JMSF039K24+ GATAAAGATAGCTCCTGTCTTGGCAACTGTTAATCAGAATATAGGACCTTCTCAATGCAT
JMSF023H01+ GATAAAGATAGCTCCTGTCTTGGCAACTGTTAATCAGAATATAGGACCTTCTCAATGCAT
JMFS055C02+ TCAGAATATAGGACCTTCTCAATGCAT
                      ____________________________________________________________
consensus GATAAAGATAGCTCCTGTCTTGGCAACTGTTAATCAGAATATAGGACCTTCTCAATGCAT
 
. : . : . : . : . : . :
JMSF023B18+ CCTCAAGCAGTTNTAATGGCTCCCTTGTTTCTGGGTACTTCTTAAGCTCTGTTATCTTTA
JMSF039K24+ CCTCAAGCAGTTNTAATGGCTCCCTTGTTTCTGGGTACTTCTTAAGCTCTGTTATCTTTA
JMSF023H01+ CCTCAAGCAGTTNTAATGGCTCCCTTGTTTCTGGGTACTTCTTAAGCTCTGTTATCTTTA
JMFF006I15+ CTTAAGCTCTGTTATCTTTA
JMFF004P12+ CTTAAGCTNTGTTATCTTTA
JMFS055C02+ CCTCAAGCAGTTCTAATGGCTCCCTTGTTTCTGGGTACTTCTTAAGCTCTGTTATCTTTA
                      ____________________________________________________________
consensus CCTCAAGCAGTTCTAATGGCTCCCTTGTTTCTGGGTACTTCTTAAGCTCTGTTATCTTTA
 
. : . : . : . : . : . :
JMSF023B18+ GCTGCTCCAACAAATTGCCAATTAACTTAAGATGCTGTGCAAACTGCCTACAATTNTTCT
JMSF039K24+ GCTGCTCCAACAAATTGCCAATTAACTTAAGATGCTGTGCAAACTGCCTACAATTCTTCT
JMSF023H01+ GCTGCTCCAACAAATTGCCAATTAACTTAAGATGCTGTGCAAACTGCCTACAATTCTTCT
JMFF006I15+ GCTGCTCCAACAAATTGCCAATTAACTTAAGATGCTGTGCAAACTGCCTACAATTCTTCT
JMFF004P12+ GCTGCTCCAACAAATTGCCAATTAACTTAAGATGCTGTGCAAACTGCCTACAATTCTTCT
JMSF016P12+ TCT
JMFS055C02+ GCTGCTCCAACAAATTGCCAATTAACTTAAGATGCTGTGCAAACTGCCTACAATTCTTCT
                      ____________________________________________________________
consensus GCTGCTCCAACAAATTGCCAATTAACTTAAGATGCTGTGCAAACTGCCTACAATTCTTCT
 
. : . : . : . : . : . :
JMSF023B18+ TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
JMSF039K24+ TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
JMSF023H01+ TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
JMFF006I15+ TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
JMFF004P12+ TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
JMSF015I01+ TATCATCCCAATTAGCTTCATAGCATCGA
JMSF016P12+ TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
JMFS055C02+ TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
                      ____________________________________________________________
consensus TGTGCATCTTTGCTGTGCTTGCGGCCTTCACTATCATCCCAATTAGCTTCATAGCATCGA
 
. : . : . : . : . : . :
JMSF023B18+ TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTNTCCCATGAAGCCATTTTCA
JMSF039K24+ TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTNTCCCATGAAGCCATTTTCA
JMSF023H01+ TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTNTCCCATGAAGCCATTTTCA
JMFF006I15+ TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTCTCCCATGAAGCCATTTTCA
JMFF004P12+ TCCCAGTCAACTGGGCAACATTTGNTAGGTCCCCCAAATTCTCCCATGAAGCCATTTTCA
JMSF015I01+ TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTCTCCCATGAAGCCATTTTCA
JMSF006I21+ TTCA
JMSF016P12+ TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTNTCCCATGAAGCCATTTTCA
JMFS055C02+ TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTCTCCCATGAAGCCATTTTCA
                      ____________________________________________________________
consensus TCCCAGTCAACTGGGCAACATTTGCTAGGTCCCCCAAATTCTCCCATGAAGCCATTTTCA
 
. : . : . : . : . : . :
JMSF023B18+ CTCCAATCAAGCAATTATNTGAATATCAGATTTCTCAAAAAAAAAATCTTCTGAATCAAA
JMSF039K24+ CTCCAATCAAGCAATTATNTGAATATCAGATTTCTCAAAAAAAAAATCTTCTGAATCAAA
JMSF023H01+ CTCCAATCAAGCAATTATNTGAATATCAGATTTNTCAAAAAAAAAATCTTCTGAATCAAA
JMFF006I15+ CTCCAATCAAGCAATTATNTGAATATCAGATTTNTCAAAAAAAAAATCTTCTGAATCAAA
JMFF004P12+ CTCCAATCAAGCAATTATNTGAATATCAGATTTCTCAAAAAAAAAATCTTCTGAATCAAA
JMSF015I01+ CTCCAATCAAGCAATTATNTGAATATCAGATTTCTCAAAAAAAAAATCTTCTGAATCAAA
JMSF006I21+ CTCCAATCAAGCAATTATNTGAATATCAGATTTCTCAAAAAAAAAATCTTCTGAATCAAA
JMSF016P12+ CTCCAATCAAGCAATTATNTGAATATCAGATTTNTCAAAAAAAAAATCTTCTGAATCAAA
JMFS055C02+ CTCCAATCAAGCAATTATCTGAATATCAGATTTCTCAAAAAAAAAATCTTCTGAATCAAA
                      ____________________________________________________________
consensus CTCCAATCAAGCAATTATCTGAATATCAGATTTCTCAAAAAAAAAATCTTCTGAATCAAA
 
. : . : . : . : . : . :
JMSF023B18+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMSF039K24+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMSF023H01+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMFF006I15+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMFF004P12+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMSF015I01+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMSF006I21+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMSF016P12+ AGTCAAAACTCAAGTAACTGTGATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
JMFS055C02+ AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
                      ____________________________________________________________
consensus AGTCAAAACTCAAGTAACTGTCATAAACATGCAGTGCTAAACAACTGGGAGAGATGATCA
 
. : . : . : . : . : . :
JMSF023B18+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
JMSF039K24+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
JMSF023H01+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
JMFF006I15+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
JMFF004P12+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
JMSF015I01+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
JMSF006I21+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGAC-AAGAATCTCTAGTACTTCCTCAC
JMSF016P12+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
JMFS055C02+ ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
                      ____________________________________________________________
consensus ACAGTCATGAAATGTAGATCTTGAAGTATTGAAGACGAAGAATCTCTAGTACTTCCTCAC
 
. : . : . : . : . : . :
JMSF023B18+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
JMSF039K24+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
JMSF023H01+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
JMFF006I15+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
JMFF004P12+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
JMSF015I01+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
JMSF006I21+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
JMSF016P12+ CCTCCAGCTG
JMFS055C02+ CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
                      ____________________________________________________________
consensus CCTCCAGCTGAAAGTAACCGCAACCGCCGTCACCGTCAATTCACTGATCTTCGCCTGCGA
 
. : . : . : . : . : . :
JMSF023B18+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
JMSF039K24+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
JMSF023H01+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGATACGGTG
JMFF006I15+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
JMFF004P12+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
JMSF015I01+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
JMSF006I21+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
JMFS055C02+ CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
                      ____________________________________________________________
consensus CCAAAAAAACGGTTAGGAGGATGAGAGAAAAAGTGGTTCGACGCGGCGTCGGCTACGGTG
 
. : . : . : . : . : . :
JMSF023B18+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACACAC
JMSF039K24+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACACAC
JMSF023H01+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACACAC
JMFF006I15+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACAC
JMFF004P12+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACAC
JMSF015I01+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACAC
JMSF006I21+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACACAC
JMFS055C02+ GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACACACTGAGAGCTTCTCTGCA
                      ____________________________________________________________
consensus GGGATTTGTCCGGGCTCGCTTTGGCCGCTGCACTTCACACACACTGAGAGCTTCTCTGCA