| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS052G12 | Sequence | 619 | 003405 (4) | ref|XP_009631279.1| | 1e-50 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS054B07 | Sequence | 599 | 003405 (4) | ref|XP_009631279.1| | 5e-62 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS073H10 | Sequence | 619 | 003405 (4) | ref|XP_009631279.1| | 5e-63 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
| JMFS084C06 | Sequence | 618 | 003405 (4) | ref|XP_009631279.1| | 8e-50 | PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic-l | |||||
This contig is upended
. : . : . : . : . : . :
JMFS054B07+ AACTAGCAAGCTCATCT
JMFS073H10+ TGGAGCTTAGATAAANAACTAGCAAGCTCATCT
JMFS084C06+ AACTAGCAAGCTCATCT
JMFS052G12+ AACTAGCAAGCTCATCT
____________________________________________________________
consensus TGGAGCTTAGATAAANAACTAGCAAGCTCATCT
. : . : . : . : . : . :
JMFS054B07+ CCATCTAGCAGATCTACTGCTGTTAACTTATGTTTTTCAAGAACAGCATCTAATGCAGTT
JMFS073H10+ CCATCTAGCAGATCTACTGCTGTTAACTTATGTTTTTCAAGAACAGCATCTAATGCAGTT
JMFS084C06+ CCATCTAGCAGATCTACTGCTGTTAACTTATGTTTTTCAAGAACAGCATCTAATGCAGTT
JMFS052G12+ CCATCTAGCAGATCTACTGCTGTTAACTTATG-TTTTCAAGAACAGCATCTAATGCAGTT
____________________________________________________________
consensus CCATCTAGCAGATCTACTGCTGTTAACTTATGTTTTTCAAGAACAGCATCTAATGCAGTT
. : . : . : . : . : . :
JMFS054B07+ ATATATGAGTCATCTCTGGACTCTGCTTTATGAATCAGATCATACATCATATCCGTCACT
JMFS073H10+ ATATATGAGTCATCTCTGGACTCTGCTTTATGAATCAGATCATACATCATATCCGTCACT
JMFS084C06+ ATATATGAGTCATCTCTGGA--CTGCTTTATGAATCAGATCATACATCATATCCGTCACT
JMFS052G12+ ATATATGAGTCATCTCTGGACTCTGCTTTATGAATCAGATCATACATCATATCCGTCACT
____________________________________________________________
consensus ATATATGAGTCATCTCTGGACTCTGCTTTATGAATCAGATCATACATCATATCCGTCACT
. : . : . : . : . : . :
JMFS054B07+ TTTGACATTGCAGACACAACAACCAGCTTTCTTTCTGATTGGTCTTTAACAATAACATTT
JMFS073H10+ TTTGACATTGCAGACACAACAACCAGCTTTCTTTCTGATTGGTCTTTAACAATAACATTT
JMFS084C06+ TTTGACATTGCAGACACAACAACCAGCTTTCTTTCTGATTGGTCTTTAACAATAACATTT
JMFS052G12+ TTTGACATTGCAGACACAACAACCAGCTTTCTTTCTGATTGGTCTTTAACAATAACATTT
____________________________________________________________
consensus TTTGACATTGCAGACACAACAACCAGCTTTCTTTCTGATTGGTCTTTAACAATAACATTT
. : . : . : . : . : . :
JMFS054B07+ GCAACATTGCGGATCCTGTCTGAGTTTCCCACACAGGTACCCCCAAATTTATGTACACCC
JMFS073H10+ GCAACATTGCGGATCCTGTCTGAGTTTCCCACACAGGTACCCCCAAATTTATGTACACCC
JMFS084C06+ GCAACATTGCGGATCCTGTCTGAGTTTCCCACACAGGTACCCCCAAATTTATGTACACCC
JMFS052G12+ GCAACATTGCGGATCCTGTCTGAGTTTCCCACACAGGTACCCCCAAATTTATGTACACCC
____________________________________________________________
consensus GCAACATTGCGGATCCTGTCTGAGTTTCCCACACAGGTACCCCCAAATTTATGTACACCC
. : . : . : . : . : . :
JMFS054B07+ CAACTATCACCCTTTGGAAGCTGAATTTTCTCTATAGTTTCCTCAGCAGTGCGCTCTGGG
JMFS073H10+ CAACTATCACCCTTTGGAAGCTGAATTTTCTCTATAGTTTCCTCAGCAGTGCGCTCTGGG
JMFS084C06+ CAACTATCACCCTTTGGAAGCTGAATTTTCTCTATAGTTTCCTCAGCAGTGCGCTCTGGG
JMFS052G12+ CAACTATCACCCTTTGGAAGCTGAATTTTCTCTATAGTTTCCTCAGCAGTGCGCTCTGGG
____________________________________________________________
consensus CAACTATCACCCTTTGGAAGCTGAATTTTCTCTATAGTTTCCTCAGCAGTGCGCTCTGGG
. : . : . : . : . : . :
JMFS054B07+ CTAATAATAGCAGAATATACGCTGAAACTTGATAATTCTCTTCTTCCCCCATGGGTATTA
JMFS073H10+ CTAATAATAGCAGAATATACGCTGAAACTTGATAATTCTCTTCTTCCCCCATGGGTATTA
JMFS084C06+ CTAATAATAGCAGAATATACGCTGAAACTTGATAATTCTCTTCTTCCCCCATGGGTATTA
JMFS052G12+ CTAATAATAGCAGAATATACGCTGAAACTTGATAATTCTCTTCTTCCCCCATGGGTATTA
____________________________________________________________
consensus CTAATAATAGCAGAATATACGCTGAAACTTGATAATTCTCTTCTTCCCCCATGGGTATTA
. : . : . : . : . : . :
JMFS054B07+ AATTCAAGTTTAGAGAAAGCGGAGCGGGGGAGGGCAGAGAAAGGGCAGATCTTGTGCATG
JMFS073H10+ AATTCAAGTTTAGAGAAAGCGGAGCGGGGGAGGGCAGAGAAAGGGCAGATCTTGTGCATG
JMFS084C06+ AATTCAAGTTTAGAGAAAGCGGAGCGGGGGAGGGCAGAGAAAGGGCAGATCTTGTGCATG
JMFS052G12+ AATTCAAGTTTAGAGAAAGCGGAGCGGGGGAGGGCAGAGAAAGGGCAGATCTTGTGCATG
____________________________________________________________
consensus AATTCAAGTTTAGAGAAAGCGGAGCGGGGGAGGGCAGAGAAAGGGCAGATCTTGTGCATG
. : . : . : . : . : . :
JMFS054B07+ TCGGCGGGGGGCGTCTTCTTAGCTTTAGGCCGGACATTGGCGGCTCCCAATAATGGGTTG
JMFS073H10+ TCGGCGGGGGGCGTCTTCTTAGCTTTAGGCCGGACATTGGCGGCTCCCAATAATGGGTTG
JMFS084C06+ TCGGCGGGGGGCGTCTTCTTAGCTTTAGGCCGGACATTGGCGGCTCCCAATAATGGGTTG
JMFS052G12+ TCGGCGGGGGGCGTCTTCTTAGCTTTAGGCCGGACATTGGCGGCTCCCAATAATGGGTTG
____________________________________________________________
consensus TCGGCGGGGGGCGTCTTCTTAGCTTTAGGCCGGACATTGGCGGCTCCCAATAATGGGTTG
. : . : . : . : . : . :
JMFS054B07+ GAGGAGAGCTTGCACGGAGAAATCGAAGACGAGAACGCCATTATTGTAGGCTCTGCAGTG
JMFS073H10+ GAGGAGAGCTTGCACGGAGAAATCGAAGACGAGAACGCCATTATTGTAGGCTCTGCAGTG
JMFS084C06+ GAGGAGAGCTTGCACGGAGAAATCGAAGACGAGAACGCCATTATTGTAGGCTCTGCAGTG
JMFS052G12+ GAGGAGAGCTTGCACGGAGAAATCGAAGACGAGAACGCCATTATTGTAGGCTCTGCAGTG
____________________________________________________________
consensus GAGGAGAGCTTGCACGGAGAAATCGAAGACGAGAACGCCATTATTGTAGGCTCTGCAGTG
. : . : . : . : . : . :
JMFS054B07+ AAGCTCAAGTGTTTGCAGAGNCCCCAGGTGTCTGGTAGCGG
JMFS073H10+ AAGCTCAAGTGTTTGCAGAGCNCCCAGGTGTCTGGTAGCGG
JMFS084C06+ AAGCTCAAGTGTTTGCAGAGNCCCCAGGTGTCTGGTAGCGGGTTGATACGGAAGAAATGG
JMFS052G12+ AAGCTCAAGTGTTTGCAGAGNCCCCAGGTGTCTGGTAGCGGGTTGATACGGAAGAAATGG
____________________________________________________________
consensus AAGCTCAAGTGTTTGCAGAGCCCCCAGGTGTCTGGTAGCGGGTTGATACGGAAGAAATGG