Contig 003404:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS126F05+                                           CCAGATGACCCCACAGCAACGTAAGAGT
                      ____________________________________________________________
consensus                                             CCAGATGACCCCACAGCAACGTAAGAGT
 
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JMFS126F05+           AAGCTCCATAGCTGTAAGGGTCCCTTCCCCAGTCAGTCACCACAGATGCAACTGGATTGG
                      ____________________________________________________________
consensus             AAGCTCCATAGCTGTAAGGGTCCCTTCCCCAGTCAGTCACCACAGATGCAACTGGATTGG
 
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JMFS126F05+           GTACCCTGCTCTCACCAAAAAGTTTGCGAAGCACCGATAGGGCATGGTTTACATGATCAG
JMFS050G03+                                                             ACATGATCAG
                      ____________________________________________________________
consensus             GTACCCTGCTCTCACCAAAAAGTTTGCGAAGCACCGATAGGGCATGGTTTACATGATCAG
 
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JMFS126F05+           ATGAACCAATATGTTGACCATCTAAAGCTGCTTTTCCAACCACCAAGGCTATAAGGACAG
JMFS050G03+           ATGAACCAATATGTTGACCATCTAAAGCTGCTTTTCCAACCACCAAGGCTATAAGGACAG
                      ____________________________________________________________
consensus             ATGAACCAATATGTTGACCATCTAAAGCTGCTTTTCCAACCACCAAGGCTATAAGGACAG
 
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JMFS126F05+           GTGCACCAACGGTTTTTCTAACATTCCAGAACATAAAGCATTGCCCTCTACGATCTGTTT
JMFS050G03+           GTGCACCAACGGTTTTTCTAACATTCCAGAACATAAAGCATTGCCCTCTACGATCTGTTT
                      ____________________________________________________________
consensus             GTGCACCAACGGTTTTTCTAACATTCCAGAACATAAAGCATTGCCCTCTACGATCTGTTT
 
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JMFS126F05+           CTTCAGCAGTTGCACCAAAGTAATCAACTGAGTCATCCCAAAAAACCTCAGGAAACTCCA
JMFS050G03+           CTTCAGCAGTTGCACCAAAGTAATCAACTGAGTCATCCCAAAAAACCTCAGGAAACTCCA
                      ____________________________________________________________
consensus             CTTCAGCAGTTGCACCAAAGTAATCAACTGAGTCATCCCAAAAAACCTCAGGAAACTCCA
 
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JMFS126F05+           AAACAACTTTATTAAGAACCCCAAAACCAAGCCGCTGAATTGACAAAGATTTCCAATGGG
JMFS050G03+           AAACAACTTTATTAAGAACCCCAAAACCAAGCCGCTGAATTGACAAAGATTTCCAATGGG
                      ____________________________________________________________
consensus             AAACAACTTTATTAAGAACCCCAAAACCAAGCCGCTGAATTGACAAAGATTTCCAATGGG
 
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JMFS126F05+           GCAAGGGGGGTGTAAAGTTAATGGCTCCTGCCTTAAGACACCCAAGCGGTACTGTAATCA
JMFS050G03+           GCAAGGGGGGTGTAAAGTTAATGGCTCCTGCCTTAAGACACCCAAGCGGTACTGTAATCA
                      ____________________________________________________________
consensus             GCAAGGGGGGTGTAAAGTTAATGGCTCCTGCCTTAAGACACCCAAGCGGTACTGTAATCA
 
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JMFS126F05+           GAACGGCATCCCCTGAGAACTCTTTTCCATTGGATGTGGAAACTTTGACCTTGTTAGTTA
JMFS050G03+           GAACGGCATCCCCTGAGAACTCTTTTCCATTGGATGTGGAAACTTTGACCTTGTTAGTTA
                      ____________________________________________________________
consensus             GAACGGCATCCCCTGAGAACTCTTTTCCATTGGATGTGGAAACTTTGACCTTGTTAGTTA
 
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JMFS126F05+           ATCCATCGCTGGTTATACTACTCTCAGTGTTATACATAATATCAGTTACAGCATGATTAA
JMFS050G03+           ATCCATCGCTGGTTATACTACTCTCAGTGTTATACATAATATCAGTTACAGCATGATTAA
                      ____________________________________________________________
consensus             ATCCATCGCTGGTTATACTACTCTCAGTGTTATACATAATATCAGTTACAGCATGATTAA
 
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JMFS126F05+           AGTGTATCCTTAGGCCTTCTCCAAGTGATTCAACAACAGCACTGTAACCCCCTTTA    
JMFS050G03+           AGTGTATCCTTAGGCCTTCTCCAAGTGATTCAACAACAGCACTGTAACCCCCTTTAATCA
                      ____________________________________________________________
consensus             AGTGTATCCTTAGGCCTTCTCCAAGTGATTCAACAACAGCACTGTAACCCCCTTTAATCA
 
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JMFS050G03+           TGCAGTGTGCTCCTCCAAAACCTCCATATACATCATCTTGATTCCAATGAGGAAGAGAAA
                      ____________________________________________________________
consensus             TGCAGTGTGCTCCTCCAAAACCTCCATATACATCATCTTGATTCCAATGAGGAAGAGAAA
 
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JMFS050G03+           CTTCCTTGAGCAATGCTGCGCATCCATACTCCAAGTTTGCAAAGTGCCAATCCATTACCC
                      ____________________________________________________________
consensus             CTTCCTTGAGCAATGCTGCGCATCCATACTCCAAGTTTGCAAAGTGCCAATCCATTACCC