Contig 003402:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS075B08+                                           GATGATGATGATATGATATGCACAATTA
                      ____________________________________________________________
consensus                                             GATGATGATGATATGATATGCACAATTA
 
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JMFS075B08+           TCGGAAGAAGGATTATTCTCAAGACAACTAGATTTTTAGTAGTACATTAAATACTCTTCT
                      ____________________________________________________________
consensus             TCGGAAGAAGGATTATTCTCAAGACAACTAGATTTTTAGTAGTACATTAAATACTCTTCT
 
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JMFS075B08+           TCTAAACAATGAACAAAAAAGTCGCACTGGTCGATACTCTCAGACGCCTAGAAGGCAGGC
                      ____________________________________________________________
consensus             TCTAAACAATGAACAAAAAAGTCGCACTGGTCGATACTCTCAGACGCCTAGAAGGCAGGC
 
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JMFS075B08+           ATATTCTACCTCTATAACATATCTCATCTCCTCTTCTTCACTCACATGTACATTATATAA
JMFS062B11+                                            TTCTTCACTCACATGTACATTATATAA
                      ____________________________________________________________
consensus             ATATTCTACCTCTATAACATATCTCATCTCCTCTTCTTCACTCACATGTACATTATATAA
 
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JMFS075B08+           ATAATCCTATACCCCATTCCATTTTACAGACAAGCTAACCTCACAGCAAAACCAGGTAGT
JMFS062B11+           ATAATCCTATACCCCATTCCATTTTACAGACAAGCTAACCTCACAGCAAAACCAGGTAGT
                      ____________________________________________________________
consensus             ATAATCCTATACCCCATTCCATTTTACAGACAAGCTAACCTCACAGCAAAACCAGGTAGT
 
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JMFS075B08+           CTCACATCTGGAGGAAAAGCCCATAGCATAATACTCCCTTCTCTCTCACATGAAGTAGCT
JMFS062B11+           CTCACATCTGGAGGAAAAGCCCATAGCATAATACTCCCTTCTCTCTCACATGAAGTAGCT
JMFS047D02+                                   AGCATAATACTCCCTTCTCTCTCACATGAAGTAGCT
                      ____________________________________________________________
consensus             CTCACATCTGGAGGAAAAGCCCATAGCATAATACTCCCTTCTCTCTCACATGAAGTAGCT
 
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JMFS075B08+           GAGTGACTTCTTTCTTCTGGACCCTCCTTCCCCATACAGTTCATTCCACTGAACAAGCTC
JMFS062B11+           GAGTGACTTCTTTCTTCTGGACCCTCCTTCCCCATACAGTTCATTCCACTGAACAAGCTC
JMFS047D02+           GAGTGACTTCTTTCTTCTGGACCCTCCTTCCCCATACAGTTCATTCCACTGAACAAGCTC
                      ____________________________________________________________
consensus             GAGTGACTTCTTTCTTCTGGACCCTCCTTCCCCATACAGTTCATTCCACTGAACAAGCTC
 
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JMFS075B08+           TGTCATGTTTATGGACTCTGACATCACACTTGCACAAACCTGCTCATGAGCATGTTTGAA
JMFS062B11+           TGTCATGTTTATGGACTCTGACATCACACTTGCACAAACCTGCTCATGAGCATGTTTGAA
JMFS047D02+           TGTCATGTTTATGGACTCTGACATCACACTTGCACAAACCTGCTCATGAGCATGTTTGAA
                      ____________________________________________________________
consensus             TGTCATGTTTATGGACTCTGACATCACACTTGCACAAACCTGCTCATGAGCATGTTTGAA
 
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JMFS075B08+           GTCGTCCAAATTTAATGGCCGAATATCCGCACTACTGCACAAAGTTGGTGGAGGTTTACC
JMFS062B11+           GTCGTCCAAATTTAATGGCCGAATATCCGCACTACTGCACAAAGTTGGTGGAGGTTTACC
JMFS047D02+           GTCGTCCAAATTTAATGGCCGAATATCCGCACTACTGCACAAAGTTGGTGGAGGTTTACC
                      ____________________________________________________________
consensus             GTCGTCCAAATTTAATGGCCGAATATCCGCACTACTGCACAAAGTTGGTGGAGGTTTACC
 
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JMFS075B08+           A                                                           
JMFS062B11+           ATCTGCCAAGGCACCAGCTTGCTCCTTTTTCTCTTTTTCTAAAATCTCTCTGATTGGACG
JMFS047D02+           ATCTGCCAAGGCACCAGCTTGCTCCTTTTTCTCTTTTTCTAAAATCTCTCTGATTGGACG
                      ____________________________________________________________
consensus             ATCTGCCAAGGCACCAGCTTGCTCCTTTTTCTCTTTTTCTAAAATCTCTCTGATTGGACG
 
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JMFS062B11+           ATATGCAGCTGCCACACATAAATTCTTAAGGTCACTTCCAGAATATCCGTCCGTCATACC
JMFS047D02+           ATATGCAGCTGCCACACATAAATTCTTAAGGTCACTTCCAGAATATCCGTCCGTCATACC
                      ____________________________________________________________
consensus             ATATGCAGCTGCCACACATAAATTCTTAAGGTCACTTCCAGAATATCCGTCCGTCATACC
 
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JMFS062B11+           AGCAACAGAATCCAAATCAACATCTGGTGACAAGTCCTCTTTTGCCAGTATCACTTTCAG
JMFS047D02+           AGCAACAGAATCCAAATCAACATCTGGTGACAAGTCCTCTTTTGCCAGTATCACTTTCAG
                      ____________________________________________________________
consensus             AGCAACAGAATCCAAATCAACATCTGGTGACAAGTCCTCTTTTGCCAGTATCACTTTCAG
 
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JMFS062B11+           GATCTTTGCTCTGTTTGGAGCATCTGGCAAACTGACCATCAATCTACGTGGCAGCCGCCT
JMFS047D02+           GATCTTTGCTCTGTTTGGAGCATCTGGCAAACTGACCATCAATCTACGTGGCAGCCGCCT
                      ____________________________________________________________
consensus             GATCTTTGCTCTGTTTGGAGCATCTGGCAAACTGACCATCAATCTACGTGGCAGCCGCCT
 
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JMFS062B11+           TATAACAGCCTCATCAAGATCAAATGGCCTATTTGTAGCTGCAAGTACAAGAACACGTTC
JMFS047D02+           TATAACAGCCTCATCAAGATCAAATGGCCTATTTGTAGCTGCAAGTACAAGAACACGTTC
                      ____________________________________________________________
consensus             TATAACAGCCTCATCAAGATCAAATGGCCTATTTGTAGCTGCAAGTACAAGAACACGTTC
 
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JMFS062B11+           TGTATCCTTTGTCCG                                             
JMFS047D02+           TGTATCCTTTGTCCGCAATCCATCCCAATTCACCATAAACTCATTTTTCATTTTGCGCAT
                      ____________________________________________________________
consensus             TGTATCCTTTGTCCGCAATCCATCCCAATTCACCATAAACTCATTTTTCATTTTGCGCAT
 
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JMFS047D02+           GGCCTCGTGCTCCCCTGGATTTTCCCTACGGCCCAGCATGCTATCAACTTCATCAACAAA
                      ____________________________________________________________
consensus             GGCCTCGTGCTCCCCTGGATTTTCCCTACGGCCCAGCATGCTATCAACTTCATCAACAAA