Contig 003396:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS058E07+                                                GCAGACTTTGGTAGAAGGAGGTC
JMFS040D07+                                                               AGGAGGTC
                      ____________________________________________________________
consensus                                                  GCAGACTTTGGTAGAAGGAGGTC
 
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JMFS058E07+           TACCAATGAATCTTGATAAAGTTCCACCATGTAAGTCTTCAAGGAAAAGGAGAACTTGTT
JMFS040D07+           TACCAATGAATCTTGATAAAGTTCCACCATGTAAGTCTTCAAGGAAAAGGAGAACTTGTT
                      ____________________________________________________________
consensus             TACCAATGAATCTTGATAAAGTTCCACCATGTAAGTCTTCAAGGAAAAGGAGAACTTGTT
 
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JMFS058E07+           GCTATCCTGCTTCATAATTTTAAAAAGTTCAGAGATAGTTCTTGGTGTTAGTCCAGGATT
JMFS040D07+           GCTATCCTGCTTCATAATTTTAAAAAGTTCAGAGATAGTTCTTGGTGTTAGTCCAGGATT
                      ____________________________________________________________
consensus             GCTATCCTGCTTCATAATTTTAAAAAGTTCAGAGATAGTTCTTGGTGTTAGTCCAGGATT
 
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JMFS058E07+           TCTATCAGATCCATAAATTGTAAATGTCTTCCCGGAGCCCGTTTGTCCATATGCAAAGAT
JMFS040D07+           TCTATCAGATCCATAAATTGTAAATGTCTTCCCGGAGCCCGTTTGTCCATATGCAAAGAT
                      ____________________________________________________________
consensus             TCTATCAGATCCATAAATTGTAAATGTCTTCCCGGAGCCCGTTTGTCCATATGCAAAGAT
 
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JMFS058E07+           ACACACATTGTATCCATCAACCGCAGATTGCACCAAAAACTTTGTATCTTCAAATACATC
JMFS040D07+           ACACACATTGTATCCATCAACCGCAGATTGCACCAAAAACTTTGTATCTTCAAATACATC
                      ____________________________________________________________
consensus             ACACACATTGTATCCATCAACCGCAGATTGCACCAAAAACTTTGTATCTTCAAATACATC
 
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JMFS058E07+           TTCTTGAGTAGAGTTTCCGTCAAACACACGATCATATATATGTTGTTTTCTTTCATCTTT
JMFS040D07+           TTCTTGAGTAGAGTTTCCGTCAAACACACGATCATATATATGTTGTTTTCTTTCATCTTT
                      ____________________________________________________________
consensus             TTCTTGAGTAGAGTTTCCGTCAAACACACGATCATATATATGTTGTTTTCTTTCATCTTT
 
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JMFS058E07+           CCACAAATGTTGAACAGTGAACTCATCAAAACTTGTGACCACAGTTCTTTCCTTTGCACC
JMFS040D07+           CCACAAATGTTGAACAGTGAACTCATCAAAACTTGTGACCACAGTTCTTTCCTTTGCACC
                      ____________________________________________________________
consensus             CCACAAATGTTGAACAGTGAACTCATCAAAACTTGTGACCACAGTTCTTTCCTTTGCACC
 
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JMFS058E07+           AATTTCTTTGTCACTAAGTGGCCTTAATCTACAGCAAACTCTGATTTTTCCTTTCATATC
JMFS040D07+           AATTTCTTTGTCACTAAGTGGCCTTAATCTACAGCAAACTCTGATTTTTCCTTTCATATC
                      ____________________________________________________________
consensus             AATTTCTTTGTCACTAAGTGGCCTTAATCTACAGCAAACTCTGATTTTTCCTTTCATATC
 
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JMFS058E07+           TTCTATCATGTTGAAGTATCTTTTCCTCAATAGTTGTTCCTCTCTATAAAGTCCTTCCAT
JMFS040D07+           TTCTATCATGTTGAAGTATCTTTTCCTCAATAGTTGTTCCTCTCTATAAAGTCCTTCCAT
                      ____________________________________________________________
consensus             TTCTATCATGTTGAAGTATCTTTTCCTCAATAGTTGTTCCTCTCTATAAAGTCCTTCCAT
 
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JMFS058E07+           CTCAGCCAACTGTGCCCCTTGCATCTTCAAAATTGCCGCAGTTTGCTCATTCTTTCGATC
JMFS040D07+           CTCAGCCAACTGTGCCCCTTGCATCTTCAAAATTGCCGCAGTTTGCTCATTCTTTCGATC
                      ____________________________________________________________
consensus             CTCAGCCAACTGTGCCCCTTGCATCTTCAAAATTGCCGCAGTTTGCTCATTCTTTCGATC
 
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JMFS058E07+           AATATCCTCTTTCATTTCTCTCAATTCCTCGAGCTCCCTTAGATTATTCTGCAACACTTC
JMFS040D07+           AATATCCTCTTTCATTTCTCTCAATTCCTCGAGCTCCCTTAGATTATTCTGCAACACTTC
                      ____________________________________________________________
consensus             AATATCCTCTTTCATTTCTCTCAATTCCTCGAGCTCCCTTAGATTATTCTGCAACACTTC