Contig 003386:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS032D09Sequence576003386 (2)gb|ADZ47880.1|5e-16brassinosteroid receptor [Solanum lycopersicum var. cerasiforme]
JMFS103H07Sequence565003386 (2)gb|ABO27627.1|6e-55BRI1 protein [Solanum tuberosum]

Alignment

This contig is upended


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JMFS103H07+             GTTACCCTTCAAAGATAACAACTCAAGCTCAGCAAAATCTTTAGATAACAGCCACGGA
                      ____________________________________________________________
consensus               GTTACCCTTCAAAGATAACAACTCAAGCTCAGCAAAATCTTTAGATAACAGCCACGGA
 
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JMFS103H07+           AAGACGTTTCTTCCTGACAAATTATTGTAAGAAAGATCAAGAATTTGAAGCTTAATACCT
                      ____________________________________________________________
consensus             AAGACGTTTCTTCCTGACAAATTATTGTAAGAAAGATCAAGAATTTGAAGCTTAATACCT
 
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JMFS103H07+           GAAGCAGCACCTCTGTGCTCCTTCTCAGGAGGAGGGTCCATGGAATTCTTGGAGAGATTG
                      ____________________________________________________________
consensus             GAAGCAGCACCTCTGTGCTCCTTCTCAGGAGGAGGGTCCATGGAATTCTTGGAGAGATTG
 
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JMFS103H07+           AGGGACCTGAGGCTTGAGCATCCACCAAGGCTATAGATATCAGAAATAGGCCCTGAAATG
                      ____________________________________________________________
consensus             AGGGACCTGAGGCTTGAGCATCCACCAAGGCTATAGATATCAGAAATAGGCCCTGAAATG
 
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JMFS103H07+           GTGTTTTCAGCTAGATCTATATGAGTCAGAGAAACCCCACACTGGGATTTTGAGGCAGAA
                      ____________________________________________________________
consensus             GTGTTTTCAGCTAGATCTATATGAGTCAGAGAAACCCCACACTGGGATTTTGAGGCAGAA
 
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JMFS103H07+           ATTAGAGAGCCACTGAGATTACTGTTCTTCAACACAAGACTCTCCAAATTTGGAAGGCTC
                      ____________________________________________________________
consensus             ATTAGAGAGCCACTGAGATTACTGTTCTTCAACACAAGACTCTCCAAATTTGGAAGGCTC
 
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JMFS103H07+           AGCAAGTGGGATGAAATGGAGGAGAAGTCCGCACTGAGTATGGTGTTGGAGAGATCTATG
JMFS032D09+                                   AAGTCCGCACTGAGTATGGTGTTGGAGAGATCTATG
                      ____________________________________________________________
consensus             AGCAAGTGGGATGAAATGGAGGAGAAGTCCGCACTGAGTATGGTGTTGGAGAGATCTATG
 
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JMFS103H07+           GAGGAGATTCTAGAGTCCTTGCATGTAACACCAGTGAAACTACAGGGGTCTGTGGAAGAC
JMFS032D09+           GAGGAGATTCTAGAGTCCTTGCATGTAACACCAGTGAAACTACAGGGGTCTGTGGAAGAC
                      ____________________________________________________________
consensus             GAGGAGATTCTAGAGTCCTTGCATGTAACACCAGTGAAACTACAGGGGTCTGTGGAAGAC
 
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JMFS103H07+           ACCCAGTTTTGAAGAGAATCTTTGCTTGAAACACCAGCCTTGAAGGATAAAAGCTGCTGG
JMFS032D09+           ACCCAGTTTTGAAGAGAATCTTTGCTTGAAACACCAGCCTTGAAGGATAAAAGCTGCTGG
                      ____________________________________________________________
consensus             ACCCAGTTTTGAAGAGAATCTTTGCTTGAAACACCAGCCTTGAAGGATAAAAGCTGCTGG
 
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JMFS103H07+           GACTGGGTGAAAAGCTCACTGGAAGAA                                 
JMFS032D09+           GACTGGGTGAAAAGCTCACTGGAAGAAGCTGCAACCCGTGAAGTTGGGGGAAGGAAGAAG
                      ____________________________________________________________
consensus             GACTGGGTGAAAAGCTCACTGGAAGAAGCTGCAACCCGTGAAGTTGGGGGAAGGAAGAAG
 
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JMFS032D09+           ATGAAGAGAGGGAGAACAAAGAGTGGATGCAGAGAAAAAAACAGCAAGAAAGCCTTGCAG
                      ____________________________________________________________
consensus             ATGAAGAGAGGGAGAACAAAGAGTGGATGCAGAGAAAAAAACAGCAAGAAAGCCTTGCAG
 
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JMFS032D09+           AAAAGACTAATCATAATAATAATAATGCTGCTGCTATTAGCTTTCATCTTCTTCTTCACT
                      ____________________________________________________________
consensus             AAAAGACTAATCATAATAATAATAATGCTGCTGCTATTAGCTTTCATCTTCTTCTTCACT
 
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JMFS032D09+           ACCTTTGTTATAATGGGTTTTCTCTGATCTAGTGTTTCCTCAGCTCTACTGCTTCCATTA
                      ____________________________________________________________
consensus             ACCTTTGTTATAATGGGTTTTCTCTGATCTAGTGTTTCCTCAGCTCTACTGCTTCCATTA
 
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JMFS032D09+           CCTGCAGAGAACACAGACAATCGGAGACGGCGGTGCTCCAAGCGAGACAGTGATGCAGAG
                      ____________________________________________________________
consensus             CCTGCAGAGAACACAGACAATCGGAGACGGCGGTGCTCCAAGCGAGACAGTGATGCAGAG
 
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JMFS032D09+           AGCTGAACGGAGGAAAAAGATGAAGGGTGACAGCGGCATGTGCATTCAGTACTGTGTGAC
                      ____________________________________________________________
consensus             AGCTGAACGGAGGAAAAAGATGAAGGGTGACAGCGGCATGTGCATTCAGTACTGTGTGAC
 
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JMFS032D09+           AGTGAAGTAGACTCAACCAGAGCTCACAAGCCATGTATGTAACCCATATCTCTCACTCTC
                      ____________________________________________________________
consensus             AGTGAAGTAGACTCAACCAGAGCTCACAAGCCATGTATGTAACCCATATCTCTCACTCTC