clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF047L08 | Sequence | 624 | 003383 (2) | ref|XP_009795091.1| | 5e-81 | PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Nicotiana sylvestris] | 591 | 023408 | ref|XP_006347362.1| | 3e-37 | PREDICTED: putative 3,4-dihydroxy-2-butanone kinase-like [Solanum tuberosum] |
JMFS030H06 | Sequence | 464 | 003383 (2) | ref|NP_001234326.1| | 3e-59 | putative 3,4-dihydroxy-2-butanone kinase [Solanum lycopersicum] sp|O04059.1|DHBK |
This contig is upended
. : . : . : . : . : . :
JMFF047L08+ GAAAGACCAGAGGCAGCTGCAGCC
____________________________________________________________
consensus GAAAGACCAGAGGCAGCTGCAGCC
. : . : . : . : . : . :
JMFF047L08+ CTTGCAACCTGTGAACAAGAATGTTCCAGCCAAACCTCTTCGTCCAGCTATGCCTCTTGG
____________________________________________________________
consensus CTTGCAACCTGTGAACAAGAATGTTCCAGCCAAACCTCTTCGTCCAGCTATGCCTCTTGG
. : . : . : . : . : . :
JMFF047L08+ AGGTGGTAAAGCACAGTCATCATCAACTATTACCATCTCTATTTTATAGCCTTCAGATTT
____________________________________________________________
consensus AGGTGGTAAAGCACAGTCATCATCAACTATTACCATCTCTATTTTATAGCCTTCAGATTT
. : . : . : . : . : . :
JMFF047L08+ GGCTTGCTCTGCAGCCAAACCAAAATTCAATCGATCACCAGTATAATTCTTGACAATCAG
____________________________________________________________
consensus GGCTTGCTCTGCAGCCAAACCAAAATTCAATCGATCACCAGTATAATTCTTGACAATCAG
. : . : . : . : . : . :
JMFF047L08+ GAGGCATCCCTTAGGACCAGTAACAGCTCGAATACCAGAAAGAATGGATTCAACGTTTGG
JMFS030H06+ ACCAGTAACAGCTCGAATACCAGAAAGAATGGATTCAACGTTTGG
____________________________________________________________
consensus GAGGCATCCCTTAGGACCAGTAACAGCTCGAATACCAGAAAGAATGGATTCAACGTTTGG
. : . : . : . : . : . :
JMFF047L08+ AGAGGCAAAAACATCTCCACATATAGCTGCTGTCAGCATCCCTTCCCCAACAAATCCAGC
JMFS030H06+ AGAGGCAAAAACATCTCCACATATAGCTGCTGTCAGCATCCCTTCCCCAACAAATCCAGC
____________________________________________________________
consensus AGAGGCAAAAACATCTCCACATATAGCTGCTGTCAGCATCCCTTCCCCAACAAATCCAGC
. : . : . : . : . : . :
JMFF047L08+ ATGAGCAGGCTCATGGCCACTTCCACCTCCTGATATTACAGCAAACTTTGTCATATTTTG
JMFS030H06+ ATGAGCAGGCTCATGGCCACTTCCACCTCCTGATATTACAGC-AACTTTGTCATATTTTG
____________________________________________________________
consensus ATGAGCAGGCTCATGGCCACTTCCACCTCCTGATATTACAGCAAACTTTGTCATATTTTG
. : . : . : . : . : . :
JMFF047L08+ CACCCGAAACATCAGCACGTAAAACAACCTTAACCTCAGGAAAACCATCCAAATACTGCA
JMFS030H06+ CACCCGAAACATCAGCACGTAAAACAACCTTAACCTCAGGAAAACCATCCAAATACTGCA
____________________________________________________________
consensus CACCCGAAACATCAGCACGTAAAACAACCTTAACCTCAGGAAAACCATCCAAATACTGCA
. : . : . : . : . : . :
JMFF047L08+ ACCCAGGATATGTCTCCACAAGGCCCTCAATGAACTCTGTCACAACGTCATTTGGGTCGT
JMFS030H06+ ACCCAGGATATGTCTCCACAAGGCCCTCAATGAACTCTGTCACAACGTCATTTGGGTCGT
____________________________________________________________
consensus ACCCAGGATATGTCTCCACAAGGCCCTCAATGAACTCTGTCACAACGTCATTTGGGTCGT
. : . : . : . : . : . :
JMFF047L08+ TGATGAGTTTCTTGCTCTGAAAAGCCATTGAATGTGAATCAATCGAATCGAGTTGAGACT
JMFS030H06+ TGATGAGTTTCTTGCTCTGAAAAGCCATTGAATGTGAATCAATCGAATCGAGTTGAGACT
____________________________________________________________
consensus TGATGAGTTTCTTGCTCTGAAAAGCCATTGAATGTGAATCAATCGAATCGAGTTGAGACT
. : . : . : . : . : . :
JMFS030H06+ GGAATCAGTGATTCATGTACTTTGGTTCAGGAGTGGAGTGATTTATTGCGGAGTTCTCGG
____________________________________________________________
consensus GGAATCAGTGATTCATGTACTTTGGTTCAGGAGTGGAGTGATTTATTGCGGAGTTCTCGG
. : . : . : . : . : . :
JMFS030H06+ ACGAACGATTAAGAAACCACGGGCGAGGGACGGGGGTGATTACTTTAATACTATTCCGAA
____________________________________________________________
consensus ACGAACGATTAAGAAACCACGGGCGAGGGACGGGGGTGATTACTTTAATACTATTCCGAA