Contig 003381:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS029F09+                                                      CAGTAGCCCATCGAGAA
                      ____________________________________________________________
consensus                                                        CAGTAGCCCATCGAGAA
 
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JMFS029F09+           CTTCAAACCACTGAATGACATGGTGTCTANAGACAACTTTCTCTCTTTCCTTTATGGTTC
                      ____________________________________________________________
consensus             CTTCAAACCACTGAATGACATGGTGTCTANAGACAACTTTCTCTCTTTCCTTTATGGTTC
 
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JMFS029F09+           TGTACTCCACATAAAGCACACTTATGAGATAAGCAGTCCAGCTCCCCATGAGCCCATAGA
                      ____________________________________________________________
consensus             TGTACTCCACATAAAGCACACTTATGAGATAAGCAGTCCAGCTCCCCATGAGCCCATAGA
 
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JMFF022A01+                  GAATATAATTCCAGACACCATTCCCAGTTGCGAAAATGAGTATGGCAGTGTCA
JMFS029F09+           AGAGCTGGAATATAATTCCAGACACCATTCCCAGTTGCGAAAATGAGTATGGCAGTGTCA
                      ____________________________________________________________
consensus             AGAGCTGGAATATAATTCCAGACACCATTCCCAGTTGCGAAAATGAGTATGGCAGTGTCA
 
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JMFF022A01+           GCAGAACTTGTGCAACCCTGATTAGAAGCACAACTAAACCATGCATCATACACAGAGCCG
JMFS029F09+           GCAGAACTTGTGCCA-CCTGATTAGAAGCACATGTAAACCATGCATCATACACAGAGCCG
                      ____________________________________________________________
consensus             GCAGAACTTGTGCCACCCTGATTAGAAGCACATGTAAACCATGCATCATACACAGAGCCG
 
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JMFF022A01+           CCATGCCAGAAAAGCTTGGAGAATTTGGTCTTAAAAGACTTATTATTATTATTATTATCA
JMFS029F09+           CCATGCCAGAAAAGCTTGGAGAATTTGGTCTTAAAAGACTTATTATTATTATTATTATCA
                      ____________________________________________________________
consensus             CCATGCCAGAAAAGCTTGGAGAATTTGGTCTTAAAAGACTTATTATTATTATTATTATCA
 
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JMFF022A01+           GAAC-TGCAGGCTTCTTCGTGTTCCATCTCTACGTAGTTCCCGGCTATCACCGTTTCCAC
JMFS029F09+           GAGCGTGCAGGCTTCTTCGTGTTCCATCTCTACGTAGTTCCCGGCTATCACCGTTTCCAC
                      ____________________________________________________________
consensus             GAGCGTGCAGGCTTCTTCGTGTTCCATCTCTACGTAGTTCCCGGCTATCACCGTTTCCAC
 
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JMFF022A01+           CTTCTCTGAAGCCATCATATATTATATATATATTTGATGAGACCGGAGGGGTGTGAATTG
JMFS029F09+           CTTCTCTGAAGCCATCATATATTATATATATATTTGATGAGACCGGAGGGGTGTGAATTG
                      ____________________________________________________________
consensus             CTTCTCTGAAGCCATCATATATTATATATATATTTGATGAGACCGGAGGGGTGTGAATTG
 
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JMFF022A01+           AAGACTAGCTTCAAGTACCTACAGTGATATATAT                          
JMFS029F09+           AAGACTAGCTTCAAGTACCTACAGTGATATATATATATATATATATATATATATATATAT
                      ____________________________________________________________
consensus             AAGACTAGCTTCAAGTACCTACAGTGATATATATATATATATATATATATATATATATAT
 
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JMFS029F09+           ATATATATATATATATATATATATATATATATATGATGAACAACCAACTTCCAATTCAAT
                      ____________________________________________________________
consensus             ATATATATATATATATATATATATATATATATATGATGAACAACCAACTTCCAATTCAAT