| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031J18 | Sequence | 612 | 003380 (9) | ref|XP_009596357.1| | 5e-42 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | 790 | 008350 (4) | ref|XP_009599034.1| | 5e-28 | PREDICTED: probable transcriptional regulator SLK2, partial [Nicotiana tomentos |
| JMFF045N13 | Sequence | 628 | 003380 (9) | ref|XP_009596357.1| | 3e-43 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | 632 | 008350 (4) | ref|XP_009599034.1| | 1e-24 | PREDICTED: probable transcriptional regulator SLK2, partial [Nicotiana tomentos |
| JMFS027E10 | Sequence | 589 | 003380 (9) | ref|XP_009596357.1| | 7e-42 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | |||||
| JMFS049A03 | Sequence | 605 | 003380 (9) | ref|XP_009596357.1| | 2e-48 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | |||||
| JMFS086H05 | Sequence | 633 | 003380 (9) | ref|XP_009596357.1| | 1e-51 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | |||||
| JMFS099A08 | Sequence | 632 | 003380 (9) | ref|XP_009596357.1| | 6e-45 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | |||||
| JMFS125D09 | Sequence | 566 | 003380 (9) | ref|XP_009596357.1| | 1e-41 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | |||||
| JMFS152G10 | Sequence | 611 | 003380 (9) | ref|XP_009596357.1| | 4e-45 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | |||||
| JMSF037B02 | Sequence | 681 | 003380 (9) | ref|XP_009596357.1| | 3e-61 | PREDICTED: probable transcriptional regulator SLK2 [Nicotiana tomentosiformis] | 760 | 008350 (4) | ref|XP_009599034.1| | 3e-27 | PREDICTED: probable transcriptional regulator SLK2, partial [Nicotiana tomentos |
This contig is upended
. : . : . : . : . : . :
JMSF037B02+ CTCCATGCGCGGTCTCTTTTGCAGCTGGGAAATAGTAGGATCTTGAATG
____________________________________________________________
consensus CTCCATGCGCGGTCTCTTTTGCAGCTGGGAAATAGTAGGATCTTGAATG
. : . : . : . : . : . :
JMSF037B02+ AATGAACCAGTCCCTCTCAGTCCTTGCCCATTTGGAAGTTGTACCTGACCTATCCTTGAA
JMFS049A03+ CCCATTTGGAAGTTGTACNTGACCTATCCTTGAA
JMFS099A08+ CTGACCTATCCTTGAA
JMFF031J18+ A
JMFF045N13+ TATCCTTGAA
JMFS086H05+ CAGTCCTTGCCCATTTGGAAGTTGTACCTGACCTATCCTTGAA
JMFS152G10+ CTGACCTATCCTTGAA
____________________________________________________________
consensus AATGAACCAGTCCCTCTCAGTCCTTGCCCATTTGGAAGTTGTACCTGACCTATCCTTGAA
. : . : . : . : . : . :
JMSF037B02+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS049A03+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS099A08+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS125D09+ TAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFF031J18+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFF045N13+ CTAGGTAAGGATGTAGCACTGNATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS086H05+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS152G10+ CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
JMFS027E10+ TGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
____________________________________________________________
consensus CTAGGTAAGGATGTAGCACTTGATGCTCCTCGATGCTGCTGACTTTGCTGAAGTTGTTGA
. : . : . : . : . : . :
JMSF037B02+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS049A03+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS099A08+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS125D09+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFF031J18+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFF045N13+ GAGGATGGATCTTGGTNTGAGCTNTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS086H05+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS152G10+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
JMFS027E10+ GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
____________________________________________________________
consensus GAGGATGGATCTTGGTTTGAGCTTTGCTGAACAACTGAGGATCCATCAATAACAGATGAG
. : . : . : . : . : . :
JMSF037B02+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS049A03+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS099A08+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS125D09+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFF031J18+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFF045N13+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS086H05+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS152G10+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
JMFS027E10+ CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
____________________________________________________________
consensus CCAGAAATACTGATATTATTGGAAGTGAATGACATGGGTGACGCAGGCAAACGCATATAA
. : . : . : . : . : . :
JMSF037B02+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS049A03+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS099A08+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS125D09+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFF031J18+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFF045N13+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS086H05+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS152G10+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
JMFS027E10+ GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
____________________________________________________________
consensus GATTCTGTATTGATGCTTGCACTTCTTTGAAGATTGGGACCTGCAGAAAGTCCTGAGTTC
. : . : . : . : . : . :
JMSF037B02+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS049A03+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS099A08+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS125D09+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFF031J18+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFF045N13+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS086H05+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS152G10+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
JMFS027E10+ GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
____________________________________________________________
consensus GCATCCGTCACTAATGAACTTGCCCCAACACTTGGACCTGAGCTTGCCACACTATTCAAA
. : . : . : . : . : . :
JMSF037B02+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS049A03+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS099A08+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS125D09+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFF031J18+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFF045N13+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS086H05+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS152G10+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
JMFS027E10+ ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
____________________________________________________________
consensus ACAGTATCTCCAGACACAGGACCCAGACTTGACCGTGGATTTCCAGGAATTAAATTTGAT
. : . : . : . : . : . :
JMSF037B02+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS049A03+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS099A08+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS125D09+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFF031J18+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFF045N13+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS086H05+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS152G10+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
JMFS027E10+ GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
____________________________________________________________
consensus GAATTTGCAAAAGATGAACTTAAGTGGGCATTGCCAACAACTTGTGACTGCCCATCACCT
. : . : . : . : . : . :
JMSF037B02+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS049A03+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS099A08+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS125D09+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFF031J18+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFF045N13+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS086H05+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS152G10+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
JMFS027E10+ TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
____________________________________________________________
consensus TGGAAAAAGATGCCAGAAGTAGAAGGAGATTGTGCAATACCTCCCGTCACCCGAGAATGC
. : . : . : . : . : . :
JMSF037B02+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS049A03+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS099A08+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS125D09+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFF031J18+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFF045N13+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS086H05+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS152G10+ ACCATTGCTGGGGCATTCCCATGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
JMFS027E10+ ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
____________________________________________________________
consensus ACCATTGCTGGGGCATTCCCCTGATAACCAGAATCCAAATAGCTCTCCAGTGCCAGACCT
. : . : . : . : . : . :
JMSF037B02+ TTCGCGGATTCTCCTCGAGACAACGAACTGC
JMFS049A03+ TTCGCGGATTCTCCTCGAGACAACGAACTGC
JMFS099A08+ TTCGCGGATTCTCCT
JMFS125D09+ TTCGCGGATTCTCCTCGAGACAACGAA
JMFF031J18+ TTCGCGGATTCTCCT
JMFF045N13+ TTCGCGGATTCTCCT
JMFS086H05+ TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTT
JMFS152G10+ TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTTTT
JMFS027E10+ TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTTTTGAGAAGCT
____________________________________________________________
consensus TTCGCGGATTCTCCTCGAGACAACGAACTGCGAGAGCGAAAGTGAATTTTTTGAGAAGCT