Contig 003379:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027A11Sequence633003379 (7)ref|XP_007215007.1|8e-74hypothetical protein PRUPE_ppa002473mg [Prunus persica] gb|EMJ16206.1| hypotheti
JMFS027B02Sequence536003379 (7)ref|XP_007215007.1|1e-58hypothetical protein PRUPE_ppa002473mg [Prunus persica] gb|EMJ16206.1| hypotheti
JMFS092E02Sequence613003379 (7)ref|XP_007215007.1|5e-97hypothetical protein PRUPE_ppa002473mg [Prunus persica] gb|EMJ16206.1| hypotheti
JMFS096D07Sequence608003379 (7)ref|XP_008348153.1|2e-103PREDICTED: importin-13-like [Malus domestica]
JMFS148E07Sequence626003379 (7)ref|XP_007215007.1|2e-72hypothetical protein PRUPE_ppa002473mg [Prunus persica] gb|EMJ16206.1| hypotheti
JMFS168H09Sequence574003379 (7)ref|XP_007215007.1|1e-91hypothetical protein PRUPE_ppa002473mg [Prunus persica] gb|EMJ16206.1| hypotheti
JMSF017O09Sequence326003379 (7)ref|XP_007215007.1|4e-42hypothetical protein PRUPE_ppa002473mg [Prunus persica] gb|EMJ16206.1| hypotheti

Alignment

This contig is upended


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JMFS096D07+                                                 GCAGCATGACCAATTTCAGACA
                      ____________________________________________________________
consensus                                                   GCAGCATGACCAATTTCAGACA
 
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JMFS096D07+           TCAAACAAGCAAGGCCACTTATTACAATCTCATCTCCATTATTAAGTGCTGGAAGGAGGA
                      ____________________________________________________________
consensus             TCAAACAAGCAAGGCCACTTATTACAATCTCATCTCCATTATTAAGTGCTGGAAGGAGGA
 
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JMFS096D07+           GGATATCCTTAATATATCCAATTCTGCACAGCAAAACCTGTGGCAATCCCTCATGTCGAC
                      ____________________________________________________________
consensus             GGATATCCTTAATATATCCAATTCTGCACAGCAAAACCTGTGGCAATCCCTCATGTCGAC
 
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JMFS096D07+           TCAAAAGTTCAACAAGAATTTCAATTGCCAGACCGAATGAAGATGAAACCTGCAAAAAAT
                      ____________________________________________________________
consensus             TCAAAAGTTCAACAAGAATTTCAATTGCCAGACCGAATGAAGATGAAACCTGCAAAAAAT
 
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JMFS096D07+           TGAAAACAAAATTCATAATTGGATGTGTGGGTAACGAGCCAGGAGGAATCTCTGAGAAGC
                      ____________________________________________________________
consensus             TGAAAACAAAATTCATAATTGGATGTGTGGGTAACGAGCCAGGAGGAATCTCTGAGAAGC
 
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JMFS096D07+           ATCCAGCTCGAACCCAACTTAACAAGCAACGCAACAGCTTTCTATTCCTATCATGCACTT
                      ____________________________________________________________
consensus             ATCCAGCTCGAACCCAACTTAACAAGCAACGCAACAGCTTTCTATTCCTATCATGCACTT
 
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JMFS096D07+           GAGTACCACTGTCAATATTCTTCTCGCTTTGCTGCAGAAGGAACTCAAAAACCATTGAAG
JMFS168H09+                    TGTCAATATTCTTCTCGCTNTGCTGCAGAAGGAACTCAAAAACCATTGAAG
JMFS092E02+                            TTCTTCTCGCTTTGCTGCAGAAGGAACTCAAAAACCATTGAAG
                      ____________________________________________________________
consensus             GAGTACCACTGTCAATATTCTTCTCGCTTTGCTGCAGAAGGAACTCAAAAACCATTGAAG
 
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JMFS096D07+           TGTGAGAGAGAAGCTCTCGGCCGTACTCATATCGTTGGACTGAACTTATTCTACAATCTG
JMFS168H09+           TGTGAGAGAGAAGCTCTCGGCCGTACTCATATCGTTGGACTGAACTTATTCTACAATCTG
JMFS092E02+           TGTGAGAGAGAAGCTCTCGGCCGTACTCATATCGTTGGACTGAACTTATTCTACAATCTG
                      ____________________________________________________________
consensus             TGTGAGAGAGAAGCTCTCGGCCGTACTCATATCGTTGGACTGAACTTATTCTACAATCTG
 
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JMFS096D07+           CATTCTGATCCTCAATAACTTCTGGCAGGACAGTAAGCATCTCCAAAACAGCAATCTTGC
JMFS168H09+           CATTCTGATCCTCAATAACTTCTGGCAGGACAGTAAGCATCTCCAAAACAGCAATCTTGC
JMFS092E02+           CATTCTGATCCTCAATAACTTCTGGCAGGACAGTAAGCATCTCCAAAACAGCAATCTTGC
JMFS148E07+                                   GCAGGACAGTAAGCATCTCCAAAACAGCAATCTTGC
JMFS027A11+                                   GCAGGACAGTAAGCATCTCCAAAACAGCAATCTTGC
                      ____________________________________________________________
consensus             CATTCTGATCCTCAATAACTTCTGGCAGGACAGTAAGCATCTCCAAAACAGCAATCTTGC
 
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JMFS096D07+           CATCGTCTTCACTTTGCAAATTGTGGAGACTGTAAAAGAGCTTTTCAATAGGTTTTCCAT
JMFS168H09+           CATCGTCTTCACTTTGCAAATTGTGGAGACTGTAAAAGAGCTTTTCAATAGGTTTTCCAT
JMFS092E02+           CATCGTCTTCACTTTGCAAATTGTGGAGACTGTAAAAGAGCTTTTCAATAGGTTTTCCAT
JMFS027B02+                                                 AGCTTTTCAATAGGTTTTCCAT
JMFS148E07+           CATCGTCTTCACTTTGCAAATTGTGGAGACTGTAAAAGAGCTTTTCAATAGGTTTTCCAT
JMFS027A11+           CATCGTCTTCACTTTGCAAATTGTGGAGACTGTAAAAGAGCTTTTCAATAGGTTTTCCAT
                      ____________________________________________________________
consensus             CATCGTCTTCACTTTGCAAATTGTGGAGACTGTAAAAGAGCTTTTCAATAGGTTTTCCAT
 
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JMFS096D07+           GCTCCACGGCATGAAGTATAAGCATAGAAAGAGCAAGACAAATTTG              
JMFS168H09+           GCTCCACGGCATGAAGTATAAGCATAGAAAGAGCAAGACAAATTTGCGTCAAAA---GCT
JMFS092E02+           GCTCCACGGCATGAAGTATAAGCATAGAAAGAGCAAGACAAATTTGCGTCAACA---GCT
JMFS027B02+           GCTCCACGGCATGAAGTATAAGCATAGAAAGAGCAAGACAAATTTGCGTCAACAGCTGCT
JMFS148E07+           GCTCCACGGCATGAAGTATAAGCATAGAAAGAGCAAGACAAATTTGCGTCAACAGCTGCT
JMFS027A11+           GCTCCNCGGCATGAAGTATAAGCATAGAAAGAGCAAGACAAATTTGCGTCAACA---GCT
                      ____________________________________________________________
consensus             GCTCCACGGCATGAAGTATAAGCATAGAAAGAGCAAGACAAATTTGCGTCAACA---GCT
 
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JMFS168H09+           GATGAGGTCCAGAACTATATCTTTTAGCTGCCAAAAGAAGAGCATTAAGCAGAGCATCTT
JMFS092E02+           GATGAGGTCCAGAACTATATCTTTTAGCTGCCAAAAGAAGAGCATTAAGCAGAGCATCTT
JMFS027B02+           GATGAGGTCCAGAACTATATCTTTTAGCTGCCAAAAGAAGAGCATTAAGCAGAGCATCTT
JMFS148E07+           GATGAGGTCCAGAACTATATCTTTTAGCTGCCAAAAGAAGAGCATTAAGCAGAGCATCTT
JMSF017O09+                                   TAGCTGCCAAAAGAAGAGCATTAAGCAGAGCATCTT
JMFS027A11+           GATGAGGTCCAGAACTATATCTTTTAGCTGCCAAAAGAAGAGCATTAAGCAGAGCATCTT
                      ____________________________________________________________
consensus             GATGAGGTCCAGAACTATATCTTTTAGCTGCCAAAAGAAGAGCATTAAGCAGAGCATCTT
 
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JMFS168H09+           TAGCACCCAACTGCAAGTAGCATCCTTCATTTTGTATCTTTCGTTTGAGAACTTGAGCAG
JMFS092E02+           TAGCACCCAACTGCAAGTAGCATCCTTCATTTTGTATCTTTCGTTTGAGAACTTGAGCAG
JMFS027B02+           TAGCACCCAACTGCAAGTAGCATCCTTCATTTTGTATCTTTCGTTTGAGAACTTGAGCAG
JMFS148E07+           TAGCACCCAACTGCAAGTAGCATCCTTCATTTTGTATCTTTCGTTTGAGAACTTGAGCAG
JMSF017O09+           TAGCACCCAACTGCAAGTAGCATCCTTCATTTTGTATCTTTCGTTTGAGAACTTGAGCAG
JMFS027A11+           TAGCACCCAACTGCAAGTAGCATCCTTCATTTTGTATCTTTCGTTTGAGAACTTGAGCAG
                      ____________________________________________________________
consensus             TAGCACCCAACTGCAAGTAGCATCCTTCATTTTGTATCTTTCGTTTGAGAACTTGAGCAG
 
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JMFS168H09+           CGAAGAACTGGACTTCGTAATCAGAAATGAATTGGTGACGGTGGTCGGAGGTGAGGATGG
JMFS092E02+           CGAAGAACTGGACTTCGTAATCAGAAATGAATTGGTGACGGTGGTCGGAGGTGAGGATGG
JMFS027B02+           CGAAGAACTGGACTTCGTAATCAGAAATGAATTGGTGACGGTGGTCGGAGGTGAGGATGG
JMFS148E07+           CGAAGAACTGGACTTCGTAATCAGAAATGAATTGGTGACGGTGGTCGGAGGTGAGGATGG
JMSF017O09+           CGAAGAACTGGACTTCGTAATCAGAAATGAATTGGTGACGGTGGTCGGAGGTGAGGATGG
JMFS027A11+           CGAAGAACTGGACTTCGTAATCAGAAATGAATTGGTGACGGTGGTCGGAGGTGAGGATGG
                      ____________________________________________________________
consensus             CGAAGAACTGGACTTCGTAATCAGAAATGAATTGGTGACGGTGGTCGGAGGTGAGGATGG
 
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JMFS168H09+           CGGTGGCGACTTCCCAAGCGGCATCAGTCTGCTGGAATTGAACAAGCCACTGATTAGCAG
JMFS092E02+           CGGTGGCGACTTCCCAAGCGGCATCAGTCTGCTGGAATTGAACAAGCCACTGATTAGCAG
JMFS027B02+           CGGTGGCGACTTCCCAAGCGGCATCAGTCTGCTGGAATTGAACAAGCCACTGATTAGCAG
JMFS148E07+           CGGTGGCGACTTCCCAAGCGGCATCAGTCTGCTGGAATTGAACAAGCCACTGATTAGCAG
JMSF017O09+           CGGTGGCGACTTCCCAAGCGGCATCAGTCTGCTGGAATTGAACAAGCCACTGATTAGCAG
JMFS027A11+           CGGTGGCGACTTCCCAAGCGGCATCAGTCTGCTGGAATTGAACAAGCCACTGATTAGCAG
                      ____________________________________________________________
consensus             CGGTGGCGACTTCCCAAGCGGCATCAGTCTGCTGGAATTGAACAAGCCACTGATTAGCAG
 
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JMFS168H09+           CTACACGGTTGCAGGATTGTGTGTCGTGATTAAGCATATGAACAGC              
JMFS092E02+           CTACACGGTTGCAGGATTGTGTGTCGTGATTAAGCATATGAACAGCCTGCGCGACCTTGA
JMFS027B02+           CTACACGGTTGCAGGATTGTGTGTCGTGATTAAGCATATGAACAGCCTGCGCGACCTTGA
JMFS148E07+           CTACACGGTTGCAGGATTGTGTGTCGTGATTAAGCATATGAACAGCCTGCGCGACCTTGA
JMSF017O09+           CTACACGGTTGCAGGATTGTGTGTCGTGATTAAGCATATGAACAGCCTGCGCGACCTTGA
JMFS027A11+           CTACACGGTTGCAGGATTGTGTGTCGTGATTAAGCATATGAACAGCCTGCGCGACCTTGA
                      ____________________________________________________________
consensus             CTACACGGTTGCAGGATTGTGTGTCGTGATTAAGCATATGAACAGCCTGCGCGACCTTGA
 
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JMFS092E02+           TTTGCAGCTCCATATCTGTGTTCCCCCGTCCAA                           
JMFS027B02+           TTTGCAGCTCCATATCTGTGTTCCCCCGTCCAAGTACAAGTCCAATTGTAAGGAAGGAAG
JMFS148E07+           TTTGCAGCTCCATATCTGTGTTCCCCCGTCCAAGTACAAGTCCAATTGTAAGGAAGGAAG
JMSF017O09+           TTTGCAGCTCCATATCTGTGTTCCCCCGTCCAAGTACAAGTCCAATTG            
JMFS027A11+           TTTGCAGCTCCATATCTGTGTTCCCCCGTCCAAGTACAAGTCCAATTGTAAGGAAGGAAG
                      ____________________________________________________________
consensus             TTTGCAGCTCCATATCTGTGTTCCCCCGTCCAAGTACAAGTCCAATTGTAAGGAAGGAAG
 
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JMFS027B02+           GAACGAACGAACATAAGTCGTCGATCAATGAAAACGAACGATTGGAGAACGACGATCGTT
JMFS148E07+           GAACGAACGAACATAAGTCGTCGATCAATGAAAACGAACGATTGGAGAACGACGATCGTT
JMFS027A11+           GAACGAACGAACATAAGTCGTCGATCAATGAAAACGAACGATTGGAGAACGACGATCGTT
                      ____________________________________________________________
consensus             GAACGAACGAACATAAGTCGTCGATCAATGAAAACGAACGATTGGAGAACGACGATCGTT
 
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JMFS027B02+           ACGCCGCATGTCTCTTGCAGCCTTGGCTAATCGA                          
JMFS148E07+           ACGCCGCATGTCTCTTGCAGCCTTGGCTAATCGACGGCTCTGAGATTCAC          
JMFS027A11+           ACGCCGCATGTCTCTTGCAGCCTTGGCTAATCGACGGCTCTGAGATTCACAGGTGTTAAA
                      ____________________________________________________________
consensus             ACGCCGCATGTCTCTTGCAGCCTTGGCTAATCGACGGCTCTGAGATTCACAGGTGTTAAA