Contig 003377:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS130A06+                                     TTCAGCTGAAGACAAAGACAGCCTCTCTTTCAAA
JMFS024F07+                                     TTCAGCTGAAGACAAAGACAGCCTCTCTTTCAAA
                      ____________________________________________________________
consensus                                       TTCAGCTGAAGACAAAGACAGCCTCTCTTTCAAA
 
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JMFS130A06+           TCCATGTAGTAGTCCTTAAGAGATACTCCCAACTACTTTTGTCATCAAAATCTATTTGTG
JMFS024F07+           TCCATGTAGTAGTCCTGAAGAGATACTCCCAACTACTTTTGTCATCAAAATCTATTTGTG
                      ____________________________________________________________
consensus             TCCATGTAGTAGTCCTTAAGAGATACTCCCAACTACTTTTGTCATCAAAATCTATTTGTG
 
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JMFS130A06+           CATCTTTGTCTCCCTGCTGCTTGCTTTCAATAAGCTTGACAGTTCTCATACAGTTTTCAC
JMFS024F07+           CATCTTTGTCTCCCTGCTGCTTGCTTTCAATAAGCTTGACAGTTCTCATACAGTTTTCAC
                      ____________________________________________________________
consensus             CATCTTTGTCTCCCTGCTGCTTGCTTTCAATAAGCTTGACAGTTCTCATACAGTTTTCAC
 
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JMFS130A06+           AAAAGCCTTTGTTTCCTCTAATGCATAAAATAACAGCACTTTTTATGCACCCCTTGCATA
JMFS024F07+           AAAAGCCTTTGTTTCCTCTAATGCATAAAATAACAGCACTTTTTATGCACCCCTTGCATA
                      ____________________________________________________________
consensus             AAAAGCCTTTGTTTCCTCTAATGCATAAAATAACAGCACTTTTTATGCACCCCTTGCATA
 
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JMFS130A06+           GTGAATAGGTGCAGGTATAACACATGTAATTTGCATTCTTCTCACAAATGCTACATAGAT
JMFS024F07+           GTGAATAGGTGCAGGTATAACACATGTAATTTGCATTCTTCTCACAAATGCTACATAGAT
                      ____________________________________________________________
consensus             GTGAATAGGTGCAGGTATAACACATGTAATTTGCATTCTTCTCACAAATGCTACATAGAT
 
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JMFS130A06+           GCCATCCACAATTCCATCTGCCCTTTGCCCGAAAAAATGCTTCATCACGATTAACACAAG
JMFS024F07+           GCCATCCACAATTCCATCTGCCCTTTGCCCGAAAAAATGCTTCATCACGATTAACACAAG
                      ____________________________________________________________
consensus             GCCATCCACAATTCCATCTGCCCTTTGCCCGAAAAAATGCTTCATCACGATTAACACAAG
 
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JMFS130A06+           AAGGATGATATGCTTTTGGGCAACCACGACGGTCACAAAGCACAAGATCCCCACCATCAA
JMFS024F07+           AAGGATGATATGCTTTTGGGCAACCACGACGGTCACAAAGCACAAGATCCCCACCATCAA
                      ____________________________________________________________
consensus             AAGGATGATATGCTTTTGGGCAACCACGACGGTCACAAAGCACAAGATCCCCACCATCAA
 
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JMFS130A06+           AGCAAATGAAGCAAACATCCTCTTCTGTCACTTTCCTTGACGGAGTTCTTGTAGCAGCCT
JMFS024F07+           AGCAAATGAAGCAAACATCCTCTTCTGTCACTTTCCTTGACGGAGTTCTTGTAGCAGCCT
                      ____________________________________________________________
consensus             AGCAAATGAAGCAAACATCCTCTTCTGTCACTTTCCTTGACGGAGTTCTTGTAGCAGCCT
 
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JMFS130A06+           TAGAAGAAGCAGGGCTCTTAGAATTCTTCCCTCTTTTCCGCTTTCCCCCAGCACCTCTAC
JMFS024F07+           TAGAAGAAGCAGGGCTCTTAGAATTCTTCCCTCTTTTCCGCTTTCCCCCAGCACCTCTAC
                      ____________________________________________________________
consensus             TAGAAGAAGCAGGGCTCTTAGAATTCTTCCCTCTTTTCCGCTTTCCCCCAGCACCTCTAC
 
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JMFS130A06+           CCGAATCTGCTGCATCAGTTTCAGTCTCAACTTCAGTATCTGCAGCAGCAGTCTCCTCAG
JMFS024F07+           CCGAATCTGCTGCATCAGTTTCAGTCTCAACTTCAGTATCTGCAGCAGCAGTCTCCTCAG
                      ____________________________________________________________
consensus             CCGAATCTGCTGCATCAGTTTCAGTCTCAACTTCAGTATCTGCAGCAGCAGTCTCCTCAG
 
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JMFS130A06+           CAGTCATTACCTCATTTTCCCCATACTGAGGATCTTCTTGTGAG                
JMFS024F07+           CAGTCATTACCTCATTTTCCCCATACTGAGGATCTTCTTGTGAGTCCTCTAACATTGAAG
                      ____________________________________________________________
consensus             CAGTCATTACCTCATTTTCCCCATACTGAGGATCTTCTTGTGAGTCCTCTAACATTGAAG