Contig 003371:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS164A02+                                                         CTTTGATAGTGCTT
                      ____________________________________________________________
consensus                                                           CTTTGATAGTGCTT
 
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JMFS164A02+           CGGCCATGTTATGAATATTGGTGNCTAAGTCCTGGTCATTGCTCCATATTTGAGAAATAA
                      ____________________________________________________________
consensus             CGGCCATGTTATGAATATTGGTGNCTAAGTCCTGGTCATTGCTCCATATTTGAGAAATAA
 
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JMFS164A02+           GGCTGGAATAATCCTTGTGTGTAGTCCATGCAGTGTTGAATCTGAAAGTTTTATTCCTGA
                      ____________________________________________________________
consensus             GGCTGGAATAATCCTTGTGTGTAGTCCATGCAGTGTTGAATCTGAAAGTTTTATTCCTGA
 
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JMFS164A02+           CTACTTGTATTATCTCATTTGTGTTAATGAGTAAGGGAGAGTGGTCCGACCCAATTATTG
JMFS018G06+                                            AGGGAGAGTGGTCCGACCCAATATTTG
                      ____________________________________________________________
consensus             CTACTTGTATTATCTCATTTGTGTTAATGAGTAAGGGAGAGTGGTCCGACCCAATTTTTG
 
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JMFS164A02+           GGAGGTGTTTAACGACCGCATTCGGAAACTCCATTTTCCATTCTATGTTGCTCAAAGCCC
JMFS018G06+           GNAGGTGTTTAACGACCGCATTCGGAAACTCCATTTTCCATTCTATGTTGCTCAAAGCCC
                      ____________________________________________________________
consensus             GGAGGTGTTTAACGACCGCATTCGGAAACTCCATTTTCCATTCTATGTTGCTCAAAGCCC
 
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JMFS164A02+           GATCAAGTCGTGCTGCCTTGAATGTATCTGATTCGGCTCCTCTCATCCATGTATACTGGG
JMFS018G06+           GATCAAGTCGTGCTGCCTTGAATGTATCTGATTCGGCTCCTCTCATCCATGTATACTGGG
                      ____________________________________________________________
consensus             GATCAAGTCGTGCTGCCTTGAATGTATCTGATTCGGCTCCTCTCATCCATGTATACTGGG
 
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JMFS164A02+           GACCTGAGAATCCTAAATCAATAAGCCCCTCTTGGAAGATCCATTTGTTGAAATCTGAAC
JMFS018G06+           GACCTGAGAATCCTAAATCAATAAGCCCCTCTTGGAAGATCCATTTGTTGAAATCTGAAC
                      ____________________________________________________________
consensus             GACCTGAGAATCCTAAATCAATAAGCCCCTCTTGGAAGATCCATTTGTTGAAATCTGAAC
 
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JMFS164A02+           ATCTTGTTTGTGAAAAGCTATCAGGATTACTGGCTTCCTCGCGACAGGTCACAGAATTAA
JMFS018G06+           ATCTTGTTTGTGAAAAGCTATCAGGATTACTGGCTTCCTCGCGACAGGTCACAGAATTAA
                      ____________________________________________________________
consensus             ATCTTGTTTGTGAAAAGCTATCAGGATTACTGGCTTCCTCGCGACAGGTCACAGAATTAA
 
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JMFS164A02+           AGTCTCCTGCATTAAGCCAAGGGCCTCTAAGATCAAGAGCTTCACTTGTGAGATCCGAGA
JMFS018G06+           AGTCTCCTGCATTAAGCCAAGGGCCTCTAAGATCAAGAGCTTCACTTGTGAGATCCGAGA
                      ____________________________________________________________
consensus             AGTCTCCTGCATTAAGCCAAGGGCCTCTAAGATCAAGAGCTTCACTTGTGAGATCCGAGA
 
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JMFS164A02+           AGAGTTTTCTACGCAGGGCGTGGTTTGGACTGCCGTAGACCACCGCGAATATCCATGGTT
JMFS018G06+           AGAGTTTTCTACGCAGGGCGTGGTTTGGACTGCCGTAGACCACCGCGAATATCCATGGTT
                      ____________________________________________________________
consensus             AGAGTTTTCTACGCAGGGCGTGGTTTGGACTGCCGTAGACCACCGCGAATATCCATGGTT
 
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JMFS164A02+           GGACGTGTACTTCTTTAACCTGCAAAAGAGCGAACTGTGGGTGAG               
JMFS018G06+           GGACGTGTACTTCTTTAACCTGCAAAAGAGCGAACTGTGGGTGAGTATGCATCATCTCGA
                      ____________________________________________________________
consensus             GGACGTGTACTTCTTTAACCTGCAAAAGAGCGAACTGTGGGTGAGTATGCATCATCTCGA
 
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JMFS018G06+           TTGAGATGGAGTTCTTCCATAATACCCAAATTCCTCCTGAGAATCCTACGGCTTCTATAC
                      ____________________________________________________________
consensus             TTGAGATGGAGTTCTTCCATAATACCCAAATTCCTCCTGAGAATCCTACGGCTTCTATAC
 
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JMFS018G06+           GAAACCACTCGTCGAAACCTAATCTAAAGCAGATTTTATTGGCATGAGATCCAGAAACTT
                      ____________________________________________________________
consensus             GAAACCACTCGTCGAAACCTAATCTAAAGCAGATTTTATTGGCATGAGATCCAGAAACTT
 
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JMFS018G06+           TAGTCTCAAGTAGGCATATCAAAACAGGATTATACTCCCGGATCATTTGTTTTAGAGTGC
                      ____________________________________________________________
consensus             TAGTCTCAAGTAGGCATATCAAAACAGGATTATACTCCCGGATCATTTGTTTTAGAGTGC