Contig 003368:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041B17+                 CTAGGGACATTCAGTCCTCAAATAGTGCTNTTACAAGTCAAGCTTCAAACACA
                      ____________________________________________________________
consensus                    CTAGGGACATTCAGTCCTCAAATAGTGCTNTTACAAGTCAAGCTTCAAACACA
 
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rJMSF041B17+          AGCTCTAATCATTCCGACATGNGTATGAATATTNGTAATGATGNGGGGCCGATTNTTGAA
JMFS015B12-                                                                  TTGAA
                      ____________________________________________________________
consensus             AGCTCTAATCATTCCGACATGNGTATGAATATTNGTAATGATGNGGGGCCGATTNTTGAA
 
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rJMSF041B17+          GAGANGTNTGACCCNGTAGATTTTGCNCNGTATTTCAAAGAAGGNTACTGCAAGGCTTCA
JMFS015B12-           GAGATGTCTGACCCTGTAGATTTTGCACAGTATTTCAAAGAAGGCTACTGCAAGGCTTCA
                      ____________________________________________________________
consensus             GAGATGTCTGACCCTGTAGATTTTGCACAGTATTTCAAAGAAGGCTACTGCAAGGCTTCA
 
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rJMSF041B17+          ACTAACNATGAATCCNGTGAGTTAACNAAACTGGTTACTGATATTGATAGAGGTAATAAT
JMFS015B12-           ACTAACAATGAATCCAGTGAGTTAACAAAACTGGTTACTGATATTGATAGAGGTAATAAT
                      ____________________________________________________________
consensus             ACTAACAATGAATCCAGTGAGTTAACAAAACTGGTTACTGATATTGATAGAGGTAATAAT
 
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rJMSF041B17+          CCNTGTGAAAAAGAGAAGGGTGAAGATGATGACCGGGAAAGTGATGACNTGCTTGGTGGN
JMFS015B12-           CCTTGTGAAAAAGAGAAGGGTGAAGATGATGACAGGGAAAGTGATGACATGCTTGGTGGT
                      ____________________________________________________________
consensus             CCTTGTGAAAAAGAGAAGGGTGAAGATGATGACCGGGAAAGTGATGACATGCTTGGTGGT
 
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rJMSF041B17+          GTATTCGACTTCTNTGAAGAAGGTTAATGCNTGACTTCAATGTTTAAACTNTACTGGNGG
JMFS015B12-           GTATTCGACTTCTCTGAAGAAGGTTAATGCATGACTTCAATGTTTAAACTCTACTGGTGG
                      ____________________________________________________________
consensus             GTATTCGACTTCTCTGAAGAAGGTTAATGCATGACTTCAATGTTTAAACTCTACTGGTGG
 
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rJMSF041B17+          AGTTAAGCCNACCTGATTTAATGCNTGGCNGCNTNTGATNTGAAGTGTGGCCTATTGCTT
JMFS015B12-           AGTTAAGCCAACCTGATTTAATGCATGGCAGCATATGATCTGAAGTGTGGCCTATTGCTT
                      ____________________________________________________________
consensus             AGTTAAGCCAACCTGATTTAATGCATGGCAGCATATGATCTGAAGTGTGGCCTATTGCTT
 
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rJMSF041B17+          TCCNAGAGGNCNAAAATGCTACTGACTTGTGTGCTATC                      
JMFS015B12-           TCCAAGAGGACAAAAATGCTACTGACTTGTGTGCTATCTGTGACATTTACTTAGTCCATT
                      ____________________________________________________________
consensus             TCCAAGAGGACAAAAATGCTACTGACTTGTGTGCTATCTGTGACATTTACTTAGTCCATT
 
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rJMFF019G07+             TTTTTTTTTTGCTGGGGGTGATGAGCGCCTGGTTTCTCTGCATCTAATTCTTGTGTA
JMFS015B12-           TGTTTTTTTTTTTGCTGGGGGTGATGAGCGCCTGGTTTCTCTGCATCTAATTCTTGTGTA
                      ____________________________________________________________
consensus             TGTTTTTTTTTTTGCTGGGGGTGATGAGCGCCTGGTTTCTCTGCATCTAATTCTTGTGTA
 
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rJMFF019G07+          TATATACTGTATATTAAAATTCNCGATGCAAACCATTGGAGTGGACACAGGTCNTTGTCT
JMFS015B12-           TATATACTGTATATTAAAATTCACGATGCAAACCATTGGAGTGGACACAGGTCTTTGTCT
                      ____________________________________________________________
consensus             TATATACTGTATATTAAAATTCACGATGCAAACCATTGGAGTGGACACAGGTCTTTGTCT
 
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rJMFF019G07+          ATGCT                                                       
JMFS015B12-           ATGCTGTTTAACTGTATTTGTTCTTTAAAGAAAAGACAATAAAAATGGGGGAAAAAAAAA
                      ____________________________________________________________
consensus             ATGCTGTTTAACTGTATTTGTTCTTTAAAGAAAAGACAATAAAAATGGGGGAAAAAAAAA