Contig 003367:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS012D12Sequence597003367 (2)dbj|BAB88648.1|5e-105microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]
JMFS090E12Sequence627003367 (2)ref|XP_010316724.1|7e-122PREDICTED: protein MOR1 isoform X2 [Solanum lycopersicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+                           ACCATCCCGCTCTGCAGTTAAGCTAGAAACAATNTGCAAGGATT
                      ____________________________________________________________
consensus                             ACCATCCCGCTCTGCAGTTAAGCTAGAAACAATNTGCAAGGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           TTAACTGTCCACCAATCTCTGCTGCATGGTTATCCAGTAAGAAGCCAACAAGGTCAACAC
                      ____________________________________________________________
consensus             TTAACTGTCCACCAATCTCTGCTGCATGGTTATCCAGTAAGAAGCCAACAAGGTCAACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           ATTCTATCCGTGTTCTATTGTTCCTAGAGCGCAAACCCTCCAAAATATAAGGAAAAGTCT
                      ____________________________________________________________
consensus             ATTCTATCCGTGTTCTATTGTTCCTAGAGCGCAAACCCTCCAAAATATAAGGAAAAGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           TTGATGCAGAATACGTGTAAATTATTTTTTTCATCAGCTCCCGCATTTTTTCTCGTACTT
                      ____________________________________________________________
consensus             TTGATGCAGAATACGTGTAAATTATTTTTTTCATCAGCTCCCGCATTTTTTCTCGTACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           TTTCAATATTGTGACCAGACTTTTCAACCAAGCAGGGAAGGAAAATGGCTGCTTCGGCTT
                      ____________________________________________________________
consensus             TTTCAATATTGTGACCAGACTTTTCAACCAAGCAGGGAAGGAAAATGGCTGCTTCGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           CTGTCATGGTGTAACCTTCATTCTTTAACATATCAAAAAGCTCAGGAAGGCATTCCAGCA
                      ____________________________________________________________
consensus             CTGTCATGGTGTAACCTTCATTCTTTAACATATCAAAAAGCTCAGGAAGGCATTCCAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           CCTTCAGTAGGCATGAAGTGTTGGATTCACAGAATCTCAAGACAAACCACCTCAAGAGTA
JMFS012D12+              TCAGTAGGCATGAAGTGTTGGATTCACAGAATCTCAAGACAAACCACCTCAAGAGTA
                      ____________________________________________________________
consensus             CCTTCAGTAGGCATGAAGTGTTGGATTCACAGAATCTCAAGACAAACCACCTCAAGAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           TGTCAAGAACTTCAATAATTTCCTTTGCAATAGATGGAAGTGCCTTCTGTAACATTTCAA
JMFS012D12+           TGTCAAGAACTTCAATAATTTCCTTTGCAATAGATGGAAGTGCCTTCTGTAACATTTCAA
                      ____________________________________________________________
consensus             TGTCAAGAACTTCAATAATTTCCTTTGCAATAGATGGAAGTGCCTTCTGTAACATTTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           TCCCATCAACTTGCTTCTTGAAGTCTGTACTTAAAAGCCTCCTATGCAAATCTTCTCTAA
JMFS012D12+           TCCCATCAACTTGCTTCTTGAAGTCTGTACTTAAAAGCCTCCTATGCAAATCTTCTCTAA
                      ____________________________________________________________
consensus             TCCCATCAACTTGCTTCTTGAAGTCTGTACTTAAAAGCCTCCTATGCAAATCTTCTCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           AGTATTTCATCAAATCACTCTCAAGATCTTGAATCTGTTCAAGACGTGGCTCCTCAAACT
JMFS012D12+           AGTATTTCATCAAATCACTCTCAAGATCTTGAATCTGTTCAAGACGTGGCTCCTCAAACT
                      ____________________________________________________________
consensus             AGTATTTCATCAAATCACTCTCAAGATCTTGAATCTGTTCAAGACGTGGCTCCTCAAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS090E12+           TAAATCTACGAATAACAATTCTCTCCCTGTCTTCCTTGTTTGA                 
JMFS012D12+           TAAATCTACGAATAACAATTCTCTCCCTGTCTTCCTTGTTTGAGTCCTTGACACTTATCA
                      ____________________________________________________________
consensus             TAAATCTACGAATAACAATTCTCTCCCTGTCTTCCTTGTTTGAGTCCTTGACACTTATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012D12+           AAGCTTGTGACTGTATATTGATGTCCTGAACAGACATAAGGGACTCCTGCCTTGAGCTCT
                      ____________________________________________________________
consensus             AAGCTTGTGACTGTATATTGATGTCCTGAACAGACATAAGGGACTCCTGCCTTGAGCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012D12+           TCACAGGAAGAGCTCTCGAAGAGCCCACTCTGTTTCCATGGCGGGAAGCACGATCAATAG
                      ____________________________________________________________
consensus             TCACAGGAAGAGCTCTCGAAGAGCCCACTCTGTTTCCATGGCGGGAAGCACGATCAATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012D12+           GAGCATTAGATTTTCCCATCTTTGAACTGTTTTTAGCTGATGGCACTGCGGAGGCTGATT
                      ____________________________________________________________
consensus             GAGCATTAGATTTTCCCATCTTTGAACTGTTTTTAGCTGATGGCACTGCGGAGGCTGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012D12+           TTCCTGAATCAAATGATTCTTGTAGAGCCCCAAAGGGTTTTAGCCGTTCAATTACAATTG
                      ____________________________________________________________
consensus             TTCCTGAATCAAATGATTCTTGTAGAGCCCCAAAGGGTTTTAGCCGTTCAATTACAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS012D12+           CTAATGCAGGTCCCTGAATATCTCTCAGATTCTTGGTCACCATCTCTTGTCCACAAACTC
                      ____________________________________________________________
consensus             CTAATGCAGGTCCCTGAATATCTCTCAGATTCTTGGTCACCATCTCTTGTCCACAAACTC