Contig 003366:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C24Sequence566003366 (5)ref|XP_004237268.1|164PREDICTED: uncharacterized protein LOC101265533 [Solanum lycopersicum]223007527 (4)
JMFF018C05Sequence597003366 (5)ref|XP_004237268.1|168PREDICTED: uncharacterized protein LOC101265533 [Solanum lycopersicum]296007527 (4)
JMFS011F01Sequence624003366 (5)ref|XP_004237268.1|168PREDICTED: uncharacterized protein LOC101265533 [Solanum lycopersicum]
JMFS074A07Sequence627003366 (5)ref|XP_004237268.1|185PREDICTED: uncharacterized protein LOC101265533 [Solanum lycopersicum]
JMFS080G12Sequence614003366 (5)ref|XP_004237268.1|171PREDICTED: uncharacterized protein LOC101265533 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS074A07+                                                          AAGCCAGTTCAAC
                      ____________________________________________________________
consensus                                                            AAGCCAGTTCAAC
 
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JMFS074A07+           CATAACTTTGCTGTCAGAATAACTGATCCATCTTCTACAACATGTATGACTTTCAGAATC
JMFS080G12+                                ACTGATCCATCTTCTACAACATGTATGACTTTCAGAATC
JMFF018C05+                                                      GTATGACTTTCAGAATC
JMFS011F01+                                                      GTATGACTTTCAGAATC
                      ____________________________________________________________
consensus             CATAACTTTGCTGTCAGAATAACTGATCCATCTTCTACAACATGTATGACTTTCAGAATC
 
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JMFS074A07+           TCACTATTACTTTCCCCACTAGAGACATCAACTTCATTATACTCCGTCTCATTCTGGAAC
JMFS080G12+           TCACTATTACTTTCCCCACTAGAGACATCAACTTCATTATACTCCGTCTCATTCTGGAAC
JMFF018C05+           TCACTATTACTTTCCCCACTAGAGACATCAACTTCATTATACTCCGTCTCATTCTGGAAC
JMFF002C24+                         CCCACTAGAGACATCAACTTCATTATACTCCGTCTCATTCTGGAAC
JMFS011F01+           TCACTATTACTTTCCCCACTAGAGACATCAACTTCATTATACTCCGTCTCATTCTGGAAC
                      ____________________________________________________________
consensus             TCACTATTACTTTCCCCACTAGAGACATCAACTTCATTATACTCCGTCTCATTCTGGAAC
 
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JMFS074A07+           CACAAGCCAGCACTGGTAATCTTGATTTGAATAATTTGCACATCTGAGATGTCCACTTTT
JMFS080G12+           CACAAGCCAGCACTGGTAATCTTGATTTGAATAATTTGCACATCTGAGATGTCCACTTTT
JMFF018C05+           CACAAGCCAGCACTGGTAATCTTGATTTGAATAATTTGCACATCTGAGATGTCCACTTTT
JMFF002C24+           CACAAGCCAGCACTGGTAATCTTGATTTGAATAATTTGCACATCTGAGATGTCCACTTTT
JMFS011F01+           CACAAGCCAGCACTGGTAATCTTGATTTGAATAATTTGCACATCTGAGATGTCCACTTTT
                      ____________________________________________________________
consensus             CACAAGCCAGCACTGGTAATCTTGATTTGAATAATTTGCACATCTGAGATGTCCACTTTT
 
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JMFS074A07+           GACAACTCGCTCGAACAGCCAGGCTGCTGAACATAGTTGGCGTGCATAACAACGAGAATA
JMFS080G12+           GACAACTCGCTCGAACAGCCAGGCTGCTGAACATAGTTGGCGTGCATAACAACGAGAATA
JMFF018C05+           GACAACTCGCTCGAACAGCCAGGCTGCTGAACATAGTTGGCGTGCATAACAACGAGAATA
JMFF002C24+           GACAACTCGCTCGAACAGCCAGGCTGCTGAACATAGTTGGCGTGCATAACAACGAGAATA
JMFS011F01+           GACAACTCGCTCGAACAGCCAGGCTGCTGAACATAGTTGGCGTGCATAACAACGAGAATA
                      ____________________________________________________________
consensus             GACAACTCGCTCGAACAGCCAGGCTGCTGAACATAGTTGGCGTGCATAACAACGAGAATA
 
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JMFS074A07+           CAGAAGAGAGTGACGGCGACGAAGAGCAAGAAATATTCGAGTGTAGCTCGAATCCTCGGA
JMFS080G12+           CAGAAGAGAGTGACGGCGACGAAGAGCAAGAAATATTCGAGTGTAGCTCGAATCCTCGGA
JMFF018C05+           CAGAAGAGAGTGACGGCGACGAAGAGCAAGAAATATTCGAGTGTAGCTCGAATCCTCGGA
JMFF002C24+           CAGAAGAGAGTGACGGCGACGAAGAGCAAGAAATATTCGAGTGTAGCTCGAATCCTCGGA
JMFS011F01+           CAGAAGAGAGTGACGGCGACGAAGAGCAAGAAATATTCGAGTGTAGCTCGAATCCTCGGA
                      ____________________________________________________________
consensus             CAGAAGAGAGTGACGGCGACGAAGAGCAAGAAATATTCGAGTGTAGCTCGAATCCTCGGA
 
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JMFS074A07+           CTCAGCATCTGAGAGAACCGTTCCTGTACGCGTATAAACGTCTGTTCCGGATCCATCGAT
JMFS080G12+           CTCAGCATCTGAGAGAACCGTTCCTGTACGCGTATAAACGTCTGTTCCGGATCCATCGAT
JMFF018C05+           CTCAGCATCTGAGAGAACCGTTCCTGTACGCGTATAAACGTCTGTTCCGGATCCATCGAT
JMFF002C24+           CTCAGCATCTGAGAGAACCGTTCCTGTACGCGTATAAACGTCTGTTCCGGATCCATCGAT
JMFS011F01+           CTCAGCATCTGAGAGAACCGTTCCTGTACGCGTATAAACGTCTGTTCCGGATCCATCGAT
                      ____________________________________________________________
consensus             CTCAGCATCTGAGAGAACCGTTCCTGTACGCGTATAAACGTCTGTTCCGGATCCATCGAT
 
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JMFS074A07+           TATCTACGCCTATATACACACACATATACATGCATACATACAAGTGTGAAGGTTTTGTAT
JMFS080G12+           TATCTACGCCTATATACACACACATATACATGCATACATACAAGTGTGAAGGTTTTGTAT
JMFF018C05+           TATCTACGCCTATATACACACACATATACATGCATACATACAAGTGTGAAGGTTTTGTAT
JMFF002C24+           TATCTACGCCTATATACACACACATATACATGCATACATACAAGTGTGAAGGTTTTGTAT
JMFS011F01+           TATCTACGCCTATATACACACACATATACATGCATACATACAAGTGTGAAGGTTTTGTAT
                      ____________________________________________________________
consensus             TATCTACGCCTATATACACACACATATACATGCATACATACAAGTGTGAAGGTTTTGTAT
 
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JMFS074A07+           GTATCTACGAGTATCAACACAATCGTATACGCTCAAATTCAATTGCTACAAATTTATGAT
JMFS080G12+           GTATCTACGAGTATCAACACAATCGTATACGCTCAAATTCAATTGCTACAAATTTATGAT
JMFF018C05+           GTATCTACGAGTATCAACACAATCGTATACGCTCAAATTCAATTGCTACAAATTTATGAT
JMFF002C24+           GTATCTACGAGTATCAACACAATCGTATACGCTCAAATTCAATTGCTACAAATTTATGAT
JMFS011F01+           GTATCTACGAGTATCAACACAATCGTATACGCTCAAATTCAATTGCTACAAATTTATGAT
                      ____________________________________________________________
consensus             GTATCTACGAGTATCAACACAATCGTATACGCTCAAATTCAATTGCTACAAATTTATGAT
 
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JMFS074A07+           GCAAACAACACCGTGTAATTAATCTCTGTATCTTCAGAGGACACTCAATAGAATCATAGG
JMFS080G12+           GCAAACAACACCGTGTAATTAATCTCTGTATCTTCAGAGGACACTCAATAGAATCATAGG
JMFF018C05+           GCAAACAACACCGTGTAATTAATCTCTGTATCTTCAGAGGACACTCAATAGAATCATAGG
JMFF002C24+           GCAAACAACACCGTGTAATTAATCTCTGTATCTTCAGAGGACACTCAATAGAATCATAGG
JMFS011F01+           GCAAACAACACCGTGTAATTAATCTCTGTATCTTCAGAGGACACTCAATAGAATCATAGG
                      ____________________________________________________________
consensus             GCAAACAACACCGTGTAATTAATCTCTGTATCTTCAGAGGACACTCAATAGAATCATAGG
 
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JMFS074A07+           TTCGCCGATTTTGCTGATCGGCCAAGTTTTAGGATTAGTTTTGTGCTGGAATCGAAGCTG
JMFS080G12+           TTCGCCGATTTTGCTGATCGGCCAAGTTTTAGGATTAGTTTTGTGCTGGAATCGAAGCTG
JMFF018C05+           TTCGCCGATTTTGCTGATCGGCCAAGTTTTAGGATTAGTTTTGTGCTGGAATCGAAGCTG
JMFF002C24+           TTCGCCGATTTTGCTGATCGGCCAAGTTTTAGGATTAGTTTTGTGCTGGAATCGAAGCTG
JMFS011F01+           TTCGCCGATTTTGCTGATCGGCCAAGTTTTAGGATTAGTTTTGTGCTGGAATCGAAGCTG
                      ____________________________________________________________
consensus             TTCGCCGATTTTGCTGATCGGCCAAGTTTTAGGATTAGTTTTGTGCTGGAATCGAAGCTG
 
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JMFS074A07+           AGAGTTTCTTCCCC                                              
JMFS080G12+           AGAGTTTCTTCCCCGAAGATGCCTGCACTTGGGGA                         
JMFF018C05+           AGAGTTTCTTCCCCGAAGATGCCTGCACTTGGGGA                         
JMFF002C24+           AGAGTTTCTTCCCCGAAGATGCCTGCACTTGGGGA                         
JMFS011F01+           AGAGTTTCTTCCCCGAAGATGCCTGCACTTGGGGAGCATCGTCAAAGTTCAAAGATGGAA
                      ____________________________________________________________
consensus             AGAGTTTCTTCCCCGAAGATGCCTGCACTTGGGGAGCATCGTCAAAGTTCAAAGATGGAA