Contig 003365:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M21Sequence513000006 (3)ref|XP_009773400.1|3e-26PREDICTED: pectinesterase 1 [Nicotiana sylvestris]603003365 (5)ref|XP_011079312.1|8e-85PREDICTED: pectinesterase 1-like [Sesamum indicum]
JMFF032J14Sequence526000006 (3)ref|XP_009773400.1|7e-27PREDICTED: pectinesterase 1 [Nicotiana sylvestris]686003365 (5)ref|XP_011079312.1|3e-102PREDICTED: pectinesterase 1-like [Sesamum indicum]
JMFF033J09Sequence511000006 (3)ref|XP_009773400.1|7e-27PREDICTED: pectinesterase 1 [Nicotiana sylvestris]643003365 (5)ref|XP_011079312.1|7e-95PREDICTED: pectinesterase 1-like [Sesamum indicum]
JMFS009D11Sequence628003365 (5)ref|XP_011079312.1|9e-60PREDICTED: pectinesterase 1-like [Sesamum indicum]
JMSF001L18Sequence403005005 (3)gb|AFI23414.1|4e-21pectin methylesterase [Coffea arabica]751003365 (5)ref|XP_004235526.1|6e-108PREDICTED: pectinesterase 3 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF001L18+           TCGGACAAGGATTCATGCCANGGACATAACGTTTCAGAACACGGCCGGAGCAGAGAAAC
                      ____________________________________________________________
consensus              TCGGACAAGGATTCATGCCANGGACATAACGTTTCAGAACACGGCCGGAGCAGAGAAAC
 
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rJMSF001L18+          ACCAGGCGGTGGCAATGCGGTCGGGGTCCGATCAATCGGTGTTTTACCACTGCTCCTTCG
rJMFF032J14+                    GGCAATGCGGTCGGGGTCCGATCAATCGGTG-TTTACCGCTGCTCCTTNG
                      ____________________________________________________________
consensus             ACCAGGCGGTGGCAATGCGGTCGGGGTCCGATCAATCGGTGTTTTACCGCTGCTCCTTCG
 
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rJMSF001L18+          ACGGCTACCAAGACACGCTCTATGCCCACTCAAACCGGCAATTCTACCGGGAGTGCCACA
rJMFF032J14+          ACGCCTACCAAGACACGCTTTACGCCCACTCAAACCGGCAATTCTACCGGGACTGCGACA
rJMFF001M21+                                                          GGGACTGCGACA
rJMFF033J09+               TACCAAGACACGCTATACGCCCNCTCAAACCGGCAATTCTACCGGGACTGCGACA
                      ____________________________________________________________
consensus             ACGGCTACCAAGACACGCTTTACGCCCACTCAAACCGGCAATTCTACCGGGACTGCGACA
 
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rJMSF001L18+          TCACCGGCACCATAGACTTCATTTTCGGCAGCGCCTCGGTGGTTTTCCAGGGCTGCAAAA
rJMFF032J14+          TCACCGGCACCGTCGACTTTATTTTCGGCAACGCCGCCGTGGTTTTCCAGAACTGCAAAA
rJMFF001M21+          TCACCGGCACCGTCGACTTTATTTTCGGCAACGCCGCCGTGGTTTTCCAGAACTGCAAAA
rJMFF033J09+          TCACCGGCACCGTCGACTTTATTTTCGGCAACGCCGCCGTGGTTTTCCAGAACTGCAAAA
                      ____________________________________________________________
consensus             TCACCGGCACCGTCGACTTTATTTTCGGCAACGCCGCCGTGGTTTTCCAGAACTGCAAAA
 
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rJMSF001L18+          TCCAGCCGAGACAACCACTGCCCAATCAATACAACACCATTACAGCCCAAGGAAAGACCG
rJMFF032J14+          TCCAGCCGCGGCAGCCGCTGCCGAATCAATTCGTCACCATTACCGCCCAAGGAAAGAAAG
rJMFF001M21+          TCCAGCCGCGGCAGCCGCTGCCGAATCAATTCGTCACCATTACCGCCCAAGGAAAGAAAG
rJMFF033J09+          TCCAGCCGCGGCAGCCGCTGCCGAATCAATTCGTCACCATTACCGCCCAAGGAAAGAAAG
JMFS009D11-                                           GTCACCATTACCGCCCAAGGAAAGAAAG
                      ____________________________________________________________
consensus             TCCAGCCGCGGCAGCCGCTGCCGAATCAATTCGTCACCATTACCGCCCAAGGAAAGAAAG
 
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rJMSF001L18+          AGCCAAATCTGTCCTCCGGCATTTCCATTCAGAAGTGCGACATATCACCGCTGGGAGAAG
rJMFF032J14+          ACCCAAACCAGAACACCGGCATTTCCATTCAGAAGTGCGACATTTCGCCGCTCGATAAGC
rJMFF001M21+          ACCCAAACCAGAACACCGGCATTTCCATTCAGAAGTGCGACATTTCGCCGCTCGATAAGC
rJMFF033J09+          ACCCAAACCAGAACACCGGCATTTCCATTCAGAAGTGCGACATTTCGCCGCTCGATAAGC
JMFS009D11-           ACCCAAACCAGAACACCGGCATTTCCATTCAGAAGTGCGACATTTCGCCGCTCGATAAGC
                      ____________________________________________________________
consensus             ACCCAAACCAGAACACCGGCATTTCCATTCAGAAGTGCGACATTTCGCCGCTCGATAAGC
 
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rJMSF001L18+          TCACGGTGCCAACTTACCTGGGCAGGCCATGGAAACCATATTCCACAACTGTTATCATGC
rJMFF032J14+          TCACCGCCCCAACTTACCTCGGCCGGCCATGGAAACAGTTCTCCACCACCGTCATCATGC
rJMFF001M21+          TCACCGCCCCAACTTACCTCGGCCGGCCATGGAAACAGTTCTCCACCACCGTCATCATGC
rJMFF033J09+          TCACCGCCCCAACTTACCTCGGCCGGCCATGGAAACAGTTCTCCACCACCGTCATCATGC
JMFS009D11-           TCACCGCCCCAACTTACCTCGGCCGGCCATGGAAACAGTTCTCCACCACCGTCATCATGC
                      ____________________________________________________________
consensus             TCACCGCCCCAACTTACCTCGGCCGGCCATGGAAACAGTTCTCCACCACCGTCATCATGC
 
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rJMSF001L18+          AATCCAGTATTGGGTCTTTGTTGAAGCCCCAAGGGTGGATTGAGTGGTTCCCCAATGTTA
rJMFF032J14+          AGTCAACGATTGGATCGTTCTTGAAGCCGCAAGGCTGGATTGAGTGGGTCCCCAATGTTG
rJMFF001M21+          AGTCAACGATTGGATCGTTCTTGAAGCCGCAAGGCTGGATTGAGTGGGTCCCCAATGTTG
rJMFF033J09+          AGTCAACGATTGGATCGTTCTTGAAGCCGCAAGGCTGGATTGAGTGGNTCCCCAATGTTG
JMFS009D11-           AGTCAACGATTGGATCGTTCTTGAAGCCGCAAGGCTGGATTGAGTGGGTCCCCAATGTTG
                      ____________________________________________________________
consensus             AGTCAACGATTGGATCGTTCTTGAAGCCGCAAGGCTGGATTGAGTGGGTCCCCAATGTTG
 
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rJMSF001L18+          CTCCTCCGGCCACCATTTTCTACGCCGAGTATATGAACACGGGCGCCGGTGCAGGTGTGG
rJMFF032J14+          ATCCTCCGGCCTCCATTTTCTACGGCGAGTATATGAACACCGGCGCCGGCGCCGGCGTGG
rJMFF001M21+          ATCCTCCGGCCTCCATTTTCTACGGCGAGTATATGAACACCGGCGCCGGCGCCGGCGTGG
rJMFF033J09+          ATCCTCCGGCCTCCATTTTCTACGGCGAGTATATGAACACCGGCGCCGGCGCCGGCGTGG
JMFS009D11-           ATCCTCCGGCCTCCATTTTCTACGGCGAGTATATGAACACCGGCGCCGGCGCCGGCGTGG
                      ____________________________________________________________
consensus             ATCCTCCGGCCTCCATTTTCTACGGCGAGTATATGAACACCGGCGCCGGCGCCGGCGTGG
 
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rJMSF001L18+          ACCAAAGGGTGAAATGGGATGGGTATCACCCCAGCATCACATCCGACCAGGCCTCCAAAT
rJMFF032J14+          AGCAAAGGGTGAAATGGGCTGGGTATAAACCTAGCATCACGTCGGACCAGGCTTCGAAAT
rJMFF001M21+          AGCAAAGGGTGAAATGGGCTGGGTATAAACCTAGCATCACGTCGGACCAGGCTTCGAAAT
rJMFF033J09+          AGCAAAGGGTGAAATGGGCTGGGTATAAACCTAGCATCACGTCGGACCAGGCTTCGAAAT
JMFS009D11-           AGCAAAGGGTGAAATGGGCTGGGTATAAACCTAGCATCACGTCGGACCAGGCTTCGAAAT
                      ____________________________________________________________
consensus             AGCAAAGGGTGAAATGGGCTGGGTATAAACCTAGCATCACGTCGGACCAGGCTTCGAAAT
 
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rJMSF001L18+          TCACCGTCCAATCTTTCATA                                        
rJMFF032J14+          TCACAGTCGAATCTTTCATACAAGGCGGCGAGTGGTTGCCGGCGGACGTCACTCATGAGC
rJMFF001M21+          TCACAGTCGAATCTTTCATACAAGGCGGCGAGTGGTTGCCGGCGGACGTCACTCATGAGC
rJMFF033J09+          TCACAGTCGAATCTTTCATACAAGGCGGCGAGTGGTTGCCGGCGGACGTCACTCATGAGC
JMFS009D11-           TCACAGTCGAATCTTTCATACAAGGCGGCGAGTGGTTGCCGGCGGACGTCACTCATGAGC
                      ____________________________________________________________
consensus             TCACAGTCGAATCTTTCATACAAGGCGGCGAGTGGTTGCCGGCGGACGTCACTCATGAGC
 
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rJMFF032J14+          CAACCCTGTAACTTAGCGACTCCATGGTAGACTAATTTACATTGAACATTATATTTCCTT
rJMFF001M21+          CAACCCTGTAACTTAGCGACTCCATGGTAGACTAATTTACATTGAACATTATATTTCCTT
rJMFF033J09+          CAACCCTGTAACTTAGCGACTCCATGGTAGACTAATTTACATTGAACATTATATTTCCTT
JMFS009D11-           CAACCCTGTAACTTAGCGACTCCATGGTAGACTAATTTACATTGAACATTATATTTCCTT
                      ____________________________________________________________
consensus             CAACCCTGTAACTTAGCGACTCCATGGTAGACTAATTTACATTGAACATTATATTTCCTT
 
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rJMFF032J14+          TCATATCTAATACCATAACATTTGTGTGTTTTTTAAT                       
rJMFF001M21+          TCATATCTAATACCATAACATTTGTGTGTTTTTTAAT                       
rJMFF033J09+          TCATATCTAATACCATAACATTTGTGTGTTTTTTAATATA                    
JMFS009D11-           TCATATCTAATACCATAACATTTGTGTGTTTTTTAATATATAAAAAGTTAAATTTTCTTT
                      ____________________________________________________________
consensus             TCATATCTAATACCATAACATTTGTGTGTTTTTTAATATATAAAAAGTTAAATTTTCTTT
 
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JMFS009D11-           GTCATTAAAAAAAAAAAAAAAAAAACXXXXXXXXXXXXXXXXXXXXXXTTCGAGACTAGG
                      ____________________________________________________________
consensus             GTCATTAAAAAAAAAAAAAAAAAAACNNNNNNNNNNNNNNNNNNNNNNTTCGAGACTAGG
 
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JMFS009D11-           CAGGACGACTGTGGTCGTTGCTCACCGTCTGTCTACGATTCGAAACGTTGATTCCATTGC
                      ____________________________________________________________
consensus             CAGGACGACTGTGGTCGTTGCTCACCGTCTGTCTACGATTCGAAACGTTGATTCCATTGC