Contig 003361:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN006L02+                                     ATACACCAAAGAATTTCTTTATTGCATATATATT
JMFN003H19+                                        CACCAAAGAATTTCTTTATTGCATATATATT
JMFN046D20+                                                         ATTGCATATATATT
                      ____________________________________________________________
consensus                                       ATACACCAAAGAATTTCTTTATTGCATATATATT
 
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JMFN006L02+           GCATAAGATAAAGACGTACATGCATCCATCCAAATCGCTAATTAACAGCAAACTTTTTTA
JMFN003H19+           GCATAAGATAAAGACGTACATGCATCCATCCAAATCGCTAATTAACAGCAAACTTTTTTA
JMFN046D20+           GCATAAGATAAAGACGTACATGCATCCATCCAAATCGCTAATTAACAGCAAACTTTTTTA
                      ____________________________________________________________
consensus             GCATAAGATAAAGACGTACATGCATCCATCCAAATCGCTAATTAACAGCAAACTTTTTTA
 
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JMFN006L02+           TTATTTTTTTTTTTAATTCTAGTATTTTTTTTTTTAAAATTCCCCCATTGAAATTAGATC
JMFN003H19+           TTATTTTTTTTTTTAATTCTAGTATTTTTTTTTTTAAAATTCCCCCATTGAAATTAGATC
JMFN046D20+           TTATTTTTTTTTTTAATTCTAGTATTTTTTTTTTTAAAATTCCCCCATTGAAATTAGATC
                      ____________________________________________________________
consensus             TTATTTTTTTTTTTAATTCTAGTATTTTTTTTTTTAAAATTCCCCCATTGAAATTAGATC
 
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JMFN006L02+           AATGAAGGTTGATTTTCAGATAACCGGATCATCATATCATTCAGTGCATGTAGAAGGCGA
JMFN003H19+           AATGAAGGTTGATTTTCAGATAACCGGATCATCATATCATTCAGTGCATGTAGAAGGCGA
JMFN046D20+           AATGAAGGTTGATTTTCAGATAACCGGATCATCATATCATTCAGTGCATGTAGAAGGCGA
                      ____________________________________________________________
consensus             AATGAAGGTTGATTTTCAGATAACCGGATCATCATATCATTCAGTGCATGTAGAAGGCGA
 
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JMFN006L02+           AGAAGGAGACGAGGGAAGCGCCGACCATCGATCCCAAAGCGGGCAGGGCAGCAACGGCGG
JMFN003H19+           AGAAGGAGACGAGGGAAGCGCCGACCATCGATCCCAAAGCGGGCAGGGCAGCAACGGCGG
JMFN046D20+           AGAAGGAGACGAGGGAAGCGCCGACCATCGATCCCAAAGCGGGCAGGGCAGCAACGGCGG
                      ____________________________________________________________
consensus             AGAAGGAGACGAGGGAAGCGCCGACCATCGATCCCAAAGCGGGCAGGGCAGCAACGGCGG
 
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JMFN006L02+           CGGCGCTGGCGGCGCCAGGGCCAGGGGCGGCGGCGCTGGGGGCGGTGGCAGCCTCAGTAG
JMFN003H19+           CGGCGCTGGCGGCGCCAGGGCCAGGGGCGGCGGCGCTGGGGGCGGTGGCAGCCTCAGTAG
JMFN046D20+           CGGCGCTGGCGGCGCCAGGGCCAGGGGCGGCGGCGCTGGGGGCGGTGGCAGCCTCAGTAG
                      ____________________________________________________________
consensus             CGGCGCTGGCGGCGCCAGGGCCAGGGGCGGCGGCGCTGGGGGCGGTGGCAGCCTCAGTAG
 
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JMFN006L02+           CCACAGCCACGGTCATGGAGGCGGCGGCGGCAACGGCAAAAGCGGCGACGCAGGCGATGT
JMFN003H19+           CCACAGCCACGGTCATGGAGGCGGCGGCGGCAACGGCAAAAGCGGCGACGCAGGCGATGT
JMFN046D20+           CCACAGCCACGGTCATGGAGGCGGCGGCGGCAACGGCAAAAGCGGCGACGCAGGCGATGT
                      ____________________________________________________________
consensus             CCACAGCCACGGTCATGGAGGCGGCGGCGGCAACGGCAAAAGCGGCGACGCAGGCGATGT
 
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JMFN006L02+           TCTTCATCTCCATTATTATTATAGATAAAATGAGCGGCCGGCGAGAAGGAATTAATGAAG
JMFN003H19+           TCTTCATCTCCATTATTATTATAGATAAAATGAGCGGCCGGCGAGAAGGAATTAATGAAG
JMFN046D20+           TCTTCATCTCCATTATTATTATAGATAAAATGAGCGGCCGGCGAGAAGGAATTAATGAAG
                      ____________________________________________________________
consensus             TCTTCATCTCCATTATTATTATAGATAAAATGAGCGGCCGGCGAGAAGGAATTAATGAAG
 
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JMFN006L02+           TGAAAAAAGTTGGAGGAAGGTGCGATCGGCAAGAAACCTCGAGGAAA             
JMFN003H19+           TGAAAAAAGTTGGAGGAAGGTGCGATCGGCAAGAAACCTCGAGGAAA             
JMFN046D20+           TGAAAAAAGTTGGAGGAAGGTGCGATCGGCAAGAAACCTCGAGGAAAGGAGTCACCGAAA
                      ____________________________________________________________
consensus             TGAAAAAAGTTGGAGGAAGGTGCGATCGGCAAGAAACCTCGAGGAAAGGAGTCACCGAAA
 
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JMFN046D20+           ACCCACCTAGCTCTTTATTTCTTTATTTGTTTTTGGCCTTTCCAATTCTTTTTCTCTTTT
                      ____________________________________________________________
consensus             ACCCACCTAGCTCTTTATTTCTTTATTTGTTTTTGGCCTTTCCAATTCTTTTTCTCTTTT