Contig 003350:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN035N10Sequence590003350 (2)ref|XP_009611855.1|78.6PREDICTED: uncharacterized protein LOC104105301 [Nicotiana tomentosiformis]
JMFN040L04Sequence568003350 (2)ref|XP_009608767.1|75.5PREDICTED: uncharacterized protein LOC104102684 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN035N10+                  ACAATTACTTTTCTACCCTCGAATACCTCAACTACCATGTACTAACAACGCGG
                      ____________________________________________________________
consensus                    ACAATTACTTTTCTACCCTCGAATACCTCAACTACCATGTACTAACAACGCGG
 
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JMFN035N10+           CCTACGGCCACCAATGCGGTGGCGCTCCGCCGTTTACAACCGCCACCCCACAACCTAACG
                      ____________________________________________________________
consensus             CCTACGGCCACCAATGCGGTGGCGCTCCGCCGTTTACAACCGCCACCCCACAACCTAACG
 
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JMFN035N10+           ACGTTGCCGTTAATCGCCGTCAAGTCCTGGCAACGGTACCACCCTGCGTCCCCCGTTTTC
                      ____________________________________________________________
consensus             ACGTTGCCGTTAATCGCCGTCAAGTCCTGGCAACGGTACCACCCTGCGTCCCCCGTTTTC
 
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JMFN035N10+           GTTCGCATCACTCGCTCCCAACTCTCATACCACTCGTTACCTAACGCCAAAACGTCAACG
JMFN040L04+                                           CTCGTTACCTAACGCCAAAACGTCAACG
                      ____________________________________________________________
consensus             GTTCGCATCACTCGCTCCCAACTCTCATACCACTCGTTACCTAACGCCAAAACGTCAACG
 
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JMFN035N10+           TCACCGTCACTGTTGCTTTCGTCGTCATCGCCGCCGCCCTCACGGTCATAAATATTCTCA
JMFN040L04+           TCACCGTCACTGTTGCTTTCGTCGTCATCGCCGCCGCCCTCACGGTCATAAATATTCTCA
                      ____________________________________________________________
consensus             TCACCGTCACTGTTGCTTTCGTCGTCATCGCCGCCGCCCTCACGGTCATAAATATTCTCA
 
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JMFN035N10+           ATGCGGCCAACATTGCCGTCACTTTCATCTCCGCCGTCAAAATACGCCGTGAACTTCCCT
JMFN040L04+           ATGCGGCCAACATTGCCGTCACTTTCATCTCCGCCGTCAAAATACGCCGTGAACTTCCCT
                      ____________________________________________________________
consensus             ATGCGGCCAACATTGCCGTCACTTTCATCTCCGCCGTCAAAATACGCCGTGAACTTCCCT
 
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JMFN035N10+           TTCGTCAACGACTCCCGTTCCCAAGCGGAAAACGACGTCGCAGCAGCTTTGGCCGGCGTT
JMFN040L04+           TTCGTCAACGACTCCCGTTCCCAAGCGGAAAACGACGTCGCAGCAGCTTTGGCCGGCGTT
                      ____________________________________________________________
consensus             TTCGTCAACGACTCCCGTTCCCAAGCGGAAAACGACGTCGCAGCAGCTTTGGCCGGCGTT
 
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JMFN035N10+           GACGCCGGCTCGGCTGGCAAGCGCTCCACCGGCGGCGACGGAGACAAAACGATACCCCTG
JMFN040L04+           GACGCCGGCTCGGCTGGCAAGCGCTCCACCGGCGGCGACGGAGACAAAACGATACCCCTG
                      ____________________________________________________________
consensus             GACGCCGGCTCGGCTGGCAAGCGCTCCACCGGCGGCGACGGAGACAAAACGATACCCCTG
 
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JMFN035N10+           GGCGGCGTCGGCGTCGGAAGATTCGACGGCGCATTTGGGAATTTGGGGCGTGGGGGCGTC
JMFN040L04+           GGCGGCGTCGGCGTCGGAAGATTCGACGGCGCATTTGGGAATTTGGGGCGTGGGGGCGTC
                      ____________________________________________________________
consensus             GGCGGCGTCGGCGTCGGAAGATTCGACGGCGCATTTGGGAATTTGGGGCGTGGGGGCGTC
 
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JMFN035N10+           GAGGGCACGGAGAGGGACAAGG-TTTGATCCTCCAGAAGCTAACGGCGGCCGTCAGAA  
JMFN040L04+           GAGGGCACGGAGAGGGACAAGGTTTTGATCCTCCAGAAGCTAACGGCGGCCGTCAGAACG
                      ____________________________________________________________
consensus             GAGGGCACGGAGAGGGACAAGGTTTTGATCCTCCAGAAGCTAACGGCGGCCGTCAGAACG
 
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JMFN040L04+           GCCACCCAAGTCCAGACATTGTTAACCGCCGTTAAAAACCCATAGCTCAGATAGTTGAAA
                      ____________________________________________________________
consensus             GCCACCCAAGTCCAGACATTGTTAACCGCCGTTAAAAACCCATAGCTCAGATAGTTGAAA
 
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JMFN040L04+           GCTAGAGCTTCAAGCGGAGATTCCAATGTATTCATTCTTTCAAGAAAACTTTTTTTTTTT
                      ____________________________________________________________
consensus             GCTAGAGCTTCAAGCGGAGATTCCAATGTATTCATTCTTTCAAGAAAACTTTTTTTTTTT
 
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JMFN040L04+           CTTTTTTCTGGCCACTGCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTGTTTCTCAGTCTC
                      ____________________________________________________________
consensus             CTTTTTTCTGGCCACTGCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTGTTTCTCAGTCTC