Contig 003348:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN018H19+                                ATGAAAAAGAAATACANATTCATTCTATTCTTTCCCCGA
JMFN037A03+                                                               TTCCCCGA
                      ____________________________________________________________
consensus                                  ATGAAAAAGAAATACANATTCATTCTATTCTTTCCCCGA
 
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JMFN018H19+           ACCAGTATATGTCTGGGCGGGGTTGCTAGTATAGGAAGCAAACATCATATCAGCGGAACA
JMFN037A03+           ACCAGTATATGTCTGGGCGGGGTTGCTAGTATAGGAAGCAAACATCATATCAGCGGAACA
                      ____________________________________________________________
consensus             ACCAGTATATGTCTGGGCGGGGTTGCTAGTATAGGAAGCAAACATCATATCAGCGGAACA
 
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JMFN018H19+           ACATAGTATTAGGAAAGTAGTAAAGATTGATGTGGTTTAATGTTGTCTAGTGGTATTCTT
JMFN037A03+           ACATAGTATTAGGAAAGTAGTAAAGATTGATGTGGTTTAATGTTGTCTAGTGGTATTCTT
                      ____________________________________________________________
consensus             ACATAGTATTAGGAAAGTAGTAAAGATTGATGTGGTTTAATGTTGTCTAGTGGTATTCTT
 
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JMFN018H19+           CAAGAGCATCTGACGCAGCTCGGCAGCGTCGACCTCGTTAACGTGGCTCTCCGGTCTGTA
JMFN037A03+           CAAGAGCATCTGACGCAGCTCGGCAGCGTCGACCTCGTTAACGTGGCTCTCCGGTCTGTA
                      ____________________________________________________________
consensus             CAAGAGCATCTGACGCAGCTCGGCAGCGTCGACCTCGTTAACGTGGCTCTCCGGTCTGTA
 
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JMFN018H19+           GTATCCGGTGACGGGATCCGGAATCCAGGAGGTGGCGCTCTTCCCCGATTCATCTCCTCC
JMFN037A03+           GTATCCGGTGACGGGATCCGGAATCCAGGAGGTGGCGCTCTTCCCCGATTCATCTCCTCC
                      ____________________________________________________________
consensus             GTATCCGGTGACGGGATCCGGAATCCAGGAGGTGGCGCTCTTCCCCGATTCATCTCCTCC
 
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JMFN018H19+           TTTCTTCAGCATCGCGTTGCTCCTCCCTGCTACGCCGGAAACAGATCCCTGCGCCGCCGC
JMFN037A03+           TTTCTTCAGCATCGCGTTGCTCCTCCCTGCTACGCCGGAAACAGATCCCTGCGCCGCCGC
                      ____________________________________________________________
consensus             TTTCTTCAGCATCGCGTTGCTCCTCCCTGCTACGCCGGAAACAGATCCCTGCGCCGCCGC
 
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JMFN018H19+           CGCCGCCGTATAGCTCCTGCGTGAGAACAAATCATCCAAACGTTTCATAAACCAATTCAT
JMFN037A03+           CGCCGCCGTATAGCTCCTGCGTGAGAACAAATCATCCAAACGTTTCATAAACCAATTCAT
                      ____________________________________________________________
consensus             CGCCGCCGTATAGCTCCTGCGTGAGAACAAATCATCCAAACGTTTCATAAACCAATTCAT
 
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JMFN018H19+           GAAATCCCATGTTTTCTTGATCTAATAACACCATAAGTTAAATACCTGGTAGCGGAAACA
JMFN037A03+           GAAATCCCATGTTTTCTTGATCTAATAACACCATAAGTTAAATACCTGGTAGCGGAAACA
                      ____________________________________________________________
consensus             GAAATCCCATGTTTTCTTGATCTAATAACACCATAAGTTAAATACCTGGTAGCGGAAACA
 
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JMFN018H19+           GAGACTCTGTCCAGCACGAAAGCAGAGACGAACTTGGCGTTGGAGATAGAACGAGCCATC
JMFN037A03+           GAGACTCTGTCCAGCACGAAAGCAGAGACGAACTTGGCGTTGGAGATAGAACGAGCCATC
                      ____________________________________________________________
consensus             GAGACTCTGTCCAGCACGAAAGCAGAGACGAACTTGGCGTTGGAGATAGAACGAGCCATC
 
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JMFN018H19+           TGATCCCCCCAGAGAAATTGACGGTGGAAGTAACGCTGCCGCGGCGGAAGGCTTAGCTAT
JMFN037A03+           TGATCCCCCCAGAGAAATTGACGGTGGAAGTAACGCTGCCGCGGCGGAAGGCTTAGCTAT
                      ____________________________________________________________
consensus             TGATCCCCCCAGAGAAATTGACGGTGGAAGTAACGCTGCCGCGGCGGAAGGCTTAGCTAT
 
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JMFN018H19+           GGCTTTACTCTCTCCCGCTGCGGCGAGACGA                             
JMFN037A03+           GGCTTTACTCTCTCCCGCTGCGGCGAGACGAAACCTGCTGTCTCTTTAGTTTAGTCTCTA
                      ____________________________________________________________
consensus             GGCTTTACTCTCTCCCGCTGCGGCGAGACGAAACCTGCTGTCTCTTTAGTTTAGTCTCTA