Contig 003347:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036N19Sequence626003347 (5)ref|XP_006358163.1|8e-93PREDICTED: cytochrome P450 714A1-like [Solanum tuberosum]
JMSF026F17Sequence571013446 (4)ref|XP_009791714.1|1e-60PREDICTED: cytochrome P450 714A1-like [Nicotiana sylvestris]797003347 (5)ref|XP_006358163.1|8e-135PREDICTED: cytochrome P450 714A1-like [Solanum tuberosum]
JMSF027F17Sequence585013446 (4)ref|XP_009791714.1|3e-63PREDICTED: cytochrome P450 714A1-like [Nicotiana sylvestris]673003347 (5)ref|XP_006358163.1|1e-132PREDICTED: cytochrome P450 714A1-like [Solanum tuberosum]
JMSF033N12Sequence667013446 (4)ref|XP_009791714.1|7e-74PREDICTED: cytochrome P450 714A1-like [Nicotiana sylvestris]767003347 (5)ref|XP_006358163.1|5e-132PREDICTED: cytochrome P450 714A1-like [Solanum tuberosum]
JMSF033P15Sequence626003347 (5)ref|XP_006358163.1|4e-100PREDICTED: cytochrome P450 714A1-like [Solanum tuberosum]769013446 (4)ref|XP_009791714.1|4e-58PREDICTED: cytochrome P450 714A1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF033N12+                                                          CAGTGCATACTG
rJMSF027F17+                                                          CAGTGCATACTG
rJMSF026F17+                                              AAGGACCTGTTGCAGTGCATACTG
                      ____________________________________________________________
consensus                                                 AAGGACCTGTTGCAGTGCATACTG
 
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rJMSF033N12+          GAAGCCGCCATTAACGATGAAAACATGGACGAGAATACGTCGAGGAAATTCATAGTCGAT
rJMSF027F17+          GAAGCCGCCATTAACGATGAAAACATGGACGAGAATACGTCGAGGAAATTCATAGTCGAT
rJMSF026F17+          GAAGCCGCCATTAACGATGAAAACATGGACGAGAATACGTCGAGGAAATTCATAGTCGAT
                      ____________________________________________________________
consensus             GAAGCCGCCATTAACGATGAAAACATGGACGAGAATACGTCGAGGAAATTCATAGTCGAT
 
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rJMSF033N12+          AACTGCAAGAACCTGTATTTTGCAGGCCACGAGGCCACCGCTGTGGCTGCATCCTGGTGC
rJMSF027F17+          AACTGCAAGAACCTGTATTTTGCAGGCCACGAGGCCACCGCTGTGGCTGCATCCTGGTGC
rJMSF026F17+          AACTGCAAGAACCTGTATTTTGCAGGCCACGAGGCCACCGCTGTGGCTGCATCCTGGTGC
                      ____________________________________________________________
consensus             AACTGCAAGAACCTGTATTTTGCAGGCCACGAGGCCACCGCTGTGGCTGCATCCTGGTGC
 
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JMSF033P15+                  TCTTAGCTCTCCACCCGGAATGGCAGACCCGTATACGCGAGGAGATGGACCAG
rJMSF033N12+          CTTATGCTCTTAGCTCTCCACCCGGAATGGCAGACCCGTATACGCGAGGAGATGGACCAG
rJMSF027F17+          CTTATGCTCTTAGCTCTCCACCCGGAATGGCAGACCCGTATACGCGAGGAGATGGACCAG
rJMSF026F17+          CTTATGCTCTTAGCTCTCCACCCGGAATGGCAGACCCGTATACGCGAGGAGATGGACCAG
JMFN036N19-                                             CCCGTATACGCGAGGAGATGGACCAG
                      ____________________________________________________________
consensus             CTTATGCTCTTAGCTCTCCACCCGGAATGGCAGACCCGTATACGCGAGGAGATGGACCAG
 
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JMSF033P15+           CTCTGCCCCAATGGCCATCTCGATGCCGAATCGATCACCAAGATGAAGGTGGTGACGATG
rJMSF033N12+          CTCTGCCCCAATGGCCATCTCGATGCCGAATCGATCACCAAGATGAAGGTGGTGACGATG
rJMSF027F17+          CTCTGCCCCAATGGCCATCTCGATGCCGAATCGATCACCAAGATGAAGGTGGTGACGATG
rJMSF026F17+          CTCTGCCCCAATGGCCATCTCGATGCCGAATCGATCACCAAGATGAAGGTGGTGACGATG
JMFN036N19-           CTCTGCCCCAATGGCCATCTCGATGCCGAATCGATCACCAAGATGAAGGTGGTGACGATG
                      ____________________________________________________________
consensus             CTCTGCCCCAATGGCCATCTCGATGCCGAATCGATCACCAAGATGAAGGTGGTGACGATG
 
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JMSF033P15+           GTGATTAATGAAGTCCTGCGTCTTTACCCACCGGCTGCATTCGTCTCGAGAGAAGCCCTC
rJMSF033N12+          GTGATTAATGAAGTCCTGCGTCTTTACCCACCGGCTGCATTCGTCTCGAGAGAAGCCCTC
rJMSF027F17+          GTGATTAATGAAGTCCTGCGTCTTTACCCACCGGCTGCATTCGTCTCGAGAGAAGCCCTC
rJMSF026F17+          GTGATTAATGAAGTCCTGCGTCTTTACCCACCGGCTGCATTCGTCTCGAGAGAAGCCCTC
JMFN036N19-           GTGATTAATGAAGTCCTGCGTCTTTACCCACCGGCTGCATTCGTCTCGAGAGAAGCCCTC
                      ____________________________________________________________
consensus             GTGATTAATGAAGTCCTGCGTCTTTACCCACCGGCTGCATTCGTCTCGAGAGAAGCCCTC
 
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JMSF033P15+           GAGGAAACACGGATAGGCCACGTCCTCGTGCCCAAAGGGGTGTGCGTATGGACATTGATC
rJMSF033N12+          GAGGAAACACGGATAGGCCACGTCCTCGTGCCCAAAGGGGTGTGCGTATGGACATTGATC
rJMSF027F17+          GAGGAAACACGGATAGGCCACGTCCTCGTGCCCAAAGGGGTGTGCGTATGGACATTGATC
rJMSF026F17+          GAGGAAACACGGATAGGCCACGTCCTCGTGCCCAAAGGGGTGTGCGTATGGACATTGATC
JMFN036N19-           GAGGAAACACGGATAGGCCACGTCCTCGTGCCCAAAGGGGTGTGCGTATGGACATTGATC
                      ____________________________________________________________
consensus             GAGGAAACACGGATAGGCCACGTCCTCGTGCCCAAAGGGGTGTGCGTATGGACATTGATC
 
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JMSF033P15+           CCGACTCTGCACCGTGACCCCGAGCTATGGGGGCAGGACGCAAACGAGTTTAAGCCCGAG
rJMSF033N12+          CCGACTCTGCACCGTGACCCCGAGCTATGGGGGCAGGACGCAAACGAGTTTAAGCCCGAG
rJMSF027F17+          CCGACTCTGCACCGTGACCCCGAGCTATGGGGGCAGGACGCAAACGAGTTTAAGCCCGAG
rJMSF026F17+          CCGACTCTGCACCGTGACCCCGAGCTATGGGGGCAGGACGCAAACGAGTTTAAGCCCGAG
JMFN036N19-           CCGACTCTGCACCGTGACCCCGAGCTATGGGGGCAGGACGCAAACGAGTTTAAGCCCGAG
                      ____________________________________________________________
consensus             CCGACTCTGCACCGTGACCCCGAGCTATGGGGGCAGGACGCAAACGAGTTTAAGCCCGAG
 
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JMSF033P15+           AGGTTTGCCAACGGCGTCTCCAATGCCTGCAAAGTGCCACAAGTTTTCATCCCGTTCGGG
rJMSF033N12+          AGGTTTGCCAACGGCGTCTCCAATGCCTGCAAAGTGCCACAAGTTTTCATCCCGTTCGGG
rJMSF027F17+          AGGTTTGCCAACGGCGTCTCCAATGCCTGCAAAGTGCCACAAGTTTTCATCCCGTTCGGG
rJMSF026F17+          AGGTTTGCCAACGGCGTCTCCAATGCCTGCAAAGTGCCACAAGTTTTCATCCCGTTCGGG
JMFN036N19-           AGGTTTGCCAACGGCGTCTCCAATGCCTGCAAAGTGCCACAAGTTTTCATCCCGTTCGGG
                      ____________________________________________________________
consensus             AGGTTTGCCAACGGCGTCTCCAATGCCTGCAAAGTGCCACAAGTTTTCATCCCGTTCGGG
 
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JMSF033P15+           GTCGGTCCTCGCCTCTGTGTTGGCCGCAACTTCGCCTTGGTTGAGCTCAAAGTTGTGTTG
rJMSF033N12+          GTCGGTCCTCGCCTCTGTGTTGGCCGCAACTTCGCCTTGGTTGAGCTCAAAGTTGTGTTG
rJMSF027F17+          GTCGGTCCTCGCCTCTGTGTTGGCCGCAACTTCGCCTTGGTTGAGCTCAAAGTTGTGTTG
rJMSF026F17+          GTCGGTCCTCGCCTCTGTGTTGGCCGCAACTTCGCCTTGGTTGAGCTCAAAGTTGTGTTG
JMFN036N19-           GTCGGTCCTCGCCTCTGTGTTGGCCGCAACTTCGCCTTGGTTGAGCTCAAAGTTGTGTTG
                      ____________________________________________________________
consensus             GTCGGTCCTCGCCTCTGTGTTGGCCGCAACTTCGCCTTGGTTGAGCTCAAAGTTGTGTTG
 
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JMSF033P15+           TCTTTCATAGTCTCCAAGCTCTCGTTCTCGCTTTCTCCAAAGTACAAACACTCCCCTGCT
rJMSF033N12+          TCTTTCATAGTCTCCAAGCTCTCGTTCTCGCTTTCTCCAAAGTACAAACACTCCCCTGCT
rJMSF027F17+          TCTTTCATAGTCTCCAAGCTCTCGTTCTCGCTTTCTCCAAAGTACAAACACTCCCCTGCT
rJMSF026F17+          TCTTTCATAGTCTCCAAGCTCTCGTTCTCGCTTTCTCCAAAGTACAAACACTCCCCTGCT
JMFN036N19-           TCTTTCATAGTCTCCAAGCTCTCGTTCTCGCTTTCTCCAAAGTACAAACACTCCCCTGCT
                      ____________________________________________________________
consensus             TCTTTCATAGTCTCCAAGCTCTCGTTCTCGCTTTCTCCAAAGTACAAACACTCCCCTGCT
 
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JMSF033P15+           TTCCAGATGGTCGTTTCGCCTGGAAAAGGAGTAAGAATTCTGATTCAGAGATTGAAGAAA
rJMSF033N12+          TTCCAGATGGTCGTTTCGCCTGGAAAAGGAGTAAGAATTCTGATTCAGAGATTGAAGAAA
rJMSF027F17+          TTCCAGATGGTCGTTTNGCCTGGAAAAGGAGTAAGAATTTTGATTCAGAGATTG      
rJMSF026F17+          TTCCAGATGGTCGTTTCGCCTGGAAAAGGAGTAAGAATTCTGATTCAGAGATTGAAGAAA
JMFN036N19-           TTCCAGATGGTCGTTTCGCCTGGAAAAGGAGTAAGAATTCTGATTCAGAGATTGAAGAAA
                      ____________________________________________________________
consensus             TTCCAGATGGTCGTTTCGCCTGGAAAAGGAGTAAGAATTCTGATTCAGAGATTGAAGAAA
 
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JMSF033P15+           TAGGATTAGGTTCTAATGGCATCAAACCTCAGATGT-ACTCCAATAAAAAAACACAAAAA
rJMSF033N12+          TAGGATTAGGTTCTAATGGCATCAAACCTCAGATGT-ACTCCAATAAAAAAACACAAAAA
rJMSF026F17+          TAGGATTAGGTTCTAATGGCATCAAACCTCAGATGT-ACTCCAATAAAAAAACACAAAAA
JMFN036N19-           TAGGATTAGGTTCTAATGGCATCAAACCTCAGATGTNACTCCATAAAAAAAACACAAAAA
                      ____________________________________________________________
consensus             TAGGATTAGGTTCTAATGGCATCAAACCTCAGATGT-ACTCCAATAAAAAAACACAAAAA
 
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JMSF033P15+           CTTTTAGGAAATCCTATGTACTTGAGGTCTGG                            
rJMSF033N12+          CTTTTAGGAAATCCTATGTACTTGAGGTCTGG                            
rJMSF026F17+          CTTTTAGGAAATCCTATGTACTTGAGGTCTGGGAACCATAATTTCTGCAAT         
JMFN036N19-           CTTTTAGGAAATCCTATGTACTTGAGGTCTGGGAACCATAATTTCTGCAATTATCTGATC
                      ____________________________________________________________
consensus             CTTTTAGGAAATCCTATGTACTTGAGGTCTGGGAACCATAATTTCTGCAATTATCTGATC