| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021F11 | Sequence | 561 | 008845 (4) | ref|XP_009600050.1| | 2e-68 | PREDICTED: serine carboxypeptidase-like 42 [Nicotiana tomentosiformis] | 763 | 003341 (5) | gb|EYU17411.1| | 4e-90 | hypothetical protein MIMGU_mgv1a005783mg [Erythranthe guttata] |
| JMFF039P20 | Sequence | 555 | 008845 (4) | ref|XP_009600050.1| | 9e-29 | PREDICTED: serine carboxypeptidase-like 42 [Nicotiana tomentosiformis] | 770 | 003341 (5) | ref|XP_006356286.1| | 360 | PREDICTED: serine carboxypeptidase-like 42-like [Solanum tuberosum] |
| JMFF047L05 | Sequence | 612 | 008845 (4) | ref|XP_009600050.1| | 4e-77 | PREDICTED: serine carboxypeptidase-like 42 [Nicotiana tomentosiformis] | 530 | 003341 (5) | ref|XP_009798650.1| | 1e-41 | PREDICTED: serine carboxypeptidase-like 42 isoform X1 [Nicotiana sylvestris] re |
| JMFN034F08 | Sequence | 532 | 003341 (5) | ref|XP_009798650.1| | 2e-61 | PREDICTED: serine carboxypeptidase-like 42 isoform X1 [Nicotiana sylvestris] re | |||||
| JMSF014F16 | Sequence | 503 | 008845 (4) | ref|XP_009600050.1| | 7e-69 | PREDICTED: serine carboxypeptidase-like 42 [Nicotiana tomentosiformis] | 815 | 003341 (5) | ref|XP_006356286.1| | 359 | PREDICTED: serine carboxypeptidase-like 42-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF014F16+ ACAATTGT
____________________________________________________________
consensus ACAATTGT
. : . : . : . : . : . :
rJMSF014F16+ GTAATGACGCCATATNTGAGGCAAACCGCATAGTTGGTGAATATGTAGACAACTACGATG
____________________________________________________________
consensus GTAATGACGCCATATNTGAGGCAAACCGCATAGTTGGTGAATATGTAGACAACTACGATG
. : . : . : . : . : . :
rJMSF014F16+ TTCCTCGATGTATGCTATCCATCGATTGTAGAGCAAGAGCTGCGGCTACGTAAGCTGGCT
rJMFF021F11+ TCGATGTATGCTATCCATCGATTGTAGAGCAAGAGCTGCGGCTACGTAAGCTGGCT
rJMFF039P20+ TCGATGTATGCTATCCATCGATTGTAGAGCAAGAGCTGCGGCTACGTAAGCTGGCT
____________________________________________________________
consensus TTCCTCGATGTATGCTATCCATCGATTGTAGAGCAAGAGCTGCGGCTACGTAAGCTGGCT
. : . : . : . : . : . :
rJMSF014F16+ ACGAAGATAAGCGTAGGTGTTGATGTCTGTATGAGCTATGAAAGACGCTTTTACTTTAAC
rJMFF021F11+ ACGAAGATAAGCGTAGGTGTTGATGTCTGTATGAGCTATGAAAGACGCTTTTACTTTAAC
rJMFF039P20+ ACGAAGATAAGCGTAGGTGTTGATGTCTGTATGAGCTATGAAAGACGCTTTTACTTTAAC
____________________________________________________________
consensus ACGAAGATAAGCGTAGGTGTTGATGTCTGTATGAGCTATGAAAGACGCTTTTACTTTAAC
. : . : . : . : . : . :
rJMSF014F16+ CTTCCCGAGGTTCAGAAAGCCCTTCATGCAAATCGTACCAAGTTGCCATATGGCTGGTCT
rJMFF021F11+ CTTCCCGAGGTTCAGAAAGCCCTTCATGCAAATCGTACCAAGTTGCCATATGGCTGGTCT
rJMFF039P20+ CTTCCCGAGGTTCAGAAAGCCCTTCATGCAAATCGTACCAAGTTGCCATATGGCTGGTCT
____________________________________________________________
consensus CTTCCCGAGGTTCAGAAAGCCCTTCATGCAAATCGTACCAAGTTGCCATATGGCTGGTCT
. : . : . : . : . : . :
rJMSF014F16+ ATGTGCAGTAGATTTCTACACTACAATGAAACTGATGGAAACATTGACATTCTTCCTCTG
rJMFF021F11+ ATGTGCAGTAGATTTCTACACTACAATGAAACTGATGGAAACATTGACATTCTTCCTCTG
rJMFF039P20+ ATGTGCAGTAGATTTCTACACTACAATGAAACTGATGGAAACATTGACATTCTTCCTCTG
____________________________________________________________
consensus ATGTGCAGTAGATTTCTACACTACAATGAAACTGATGGAAACATTGACATTCTTCCTCTG
. : . : . : . : . : . :
rJMSF014F16+ CTTAAAAGGATCATAAGGAACCACATTCCGGTTTGGATTTTCAGCGGGGATCAAGATTCG
rJMFF021F11+ CTTAAAAGGATCATAAGGAACCACATTCCGGTTTGGATTTTCAGCGGGGATCAAGATTCG
rJMFF039P20+ CTTAAAAGGATCATAAGGAACCACATTCCGGTTTGGATTTTCAGCGGGGATCAAGATTCG
rJMFF047L05+ TTCCGGTTTGGATTTTCAGCGGGGATCAAGATTCG
JMFN034F08- GATCATAAGGAACCACATTCCGGTTTGGATTTTCAGCGGGGATCAAGATTCG
____________________________________________________________
consensus CTTAAAAGGATCATAAGGAACCACATTCCGGTTTGGATTTTCAGCGGGGATCAAGATTCG
. : . : . : . : . : . :
rJMSF014F16+ GTTGTGCCATTGCTCGGGTCGCGAACACTTGTCCGTGAACTTGCTCACGACATGGGGTTC
rJMFF021F11+ GTTGTGCCATTGCTCGGGTCGCGAACACTTGTCCGTGAACTTGCTCACGACATGGGGTTC
rJMFF039P20+ GTTGTGCCATTGCTCGGGTCGCGAACACTTGTCCGTGAACTTGCTCACGACATGGGGTTC
rJMFF047L05+ GTTGTGCCATTGCTCGGGTCGCGAACACTTGTCCGTGAACTTGCTCACGACATGGGGTTC
JMFN034F08- GTTGTGCCATTGCTCGGGTCGCGAACACTTGTCCGTGAACTTGCTCACGACATGGGGTTC
____________________________________________________________
consensus GTTGTGCCATTGCTCGGGTCGCGAACACTTGTCCGTGAACTTGCTCACGACATGGGGTTC
. : . : . : . : . : . :
rJMSF014F16+ AAGGTTACAGTCCCTTATGGAGCTTGGTTTCACAGGAAACAGGTGGGAGGCTGGGCAACA
rJMFF021F11+ AAGGTTACAGTCCCTTATGGAGCTTGGTTTCACAGGAAACAGGTGGGAGGCTGGGCAACA
rJMFF039P20+ AAGGTTACAGTCCCTTATGGAGCTTGGTTTCACAGGAAACAGGTGGGAGGCTGGGCAACA
rJMFF047L05+ AAGGTTACAGTCCCTTATGGAGCTTGGTTTCACAGGAAACAGGTGGGAGGCTGGGCAACA
JMFN034F08- AAGGTTACAGTCCCTTATGGAGCTTGGTTTCACAGGAAACAGGTGGGAGGCTGGGCAACA
____________________________________________________________
consensus AAGGTTACAGTCCCTTATGGAGCTTGGTTTCACAGGAAACAGGTGGGAGGCTGGGCAACA
. : . : . : . : . : . :
rJMSF014F16+ GAGTATGGGAAGTTGTTAACCTTTGCCACTGTGAGGGGTGCTTCTCATATGGTGCCCTTT
rJMFF021F11+ GAGTATGGGAAGT--TTAACCTTTGCCACTGTGAGGGGTGCTTCTCATATGGTGCCCTTT
rJMFF039P20+ GAGTATGGGAAGTTGTTAACCTTTGCCACTGTGAGGGGTGCTTCTCATATGGTGCCCTTT
rJMFF047L05+ GAGTATGGGAAGT--TTAACCTTTGCCACTGTGAGGGGTGCTTTTCATATGGTGCCCTTT
JMFN034F08- GAGTATGGGAAGTTGTTAACCTTTGCCACTGTGAGGGGTGCTTCTCATATGGTGCCCTTT
____________________________________________________________
consensus GAGTATGGGAAGTTGTTAACCTTTGCCACTGTGAGGGGTGCTTCTCATATGGTGCCCTTT
. : . : . : . : . : . :
rJMSF014F16+ GCTCAGCCCTCTAGAGCTCTTCACCTCTTCAGCTCTTTCGTACGTGGCCGGAGATTGCCA
rJMFF021F11+ GCTCAGCCCTCTAGAGCTCTTCACCTCTTCAGCTCTTTCGTACGTGGCCGGAGATTGCCA
rJMFF039P20+ GCTCAGCCCTCTAGAGCTCTTCACCTCTTCAGCTCTTTCGTACGTGGCCGGAGATTGCCA
rJMFF047L05+ GCTCAGCCCTTTAGAGCTCTTCACCTCTTCAGCTCTTTCGTACGTGGCCGGAGATTGCCA
JMFN034F08- GCTCAGCCCTCTAGAGCTCTTCACCTCTTCAGCTCTTTCGTACGTGGCCGGAGATTGCCA
____________________________________________________________
consensus GCTCAGCCCTCTAGAGCTCTTCACCTCTTCAGCTCTTTCGTACGTGGCCGGAGATTGCCA
. : . : . : . : . : . :
rJMSF014F16+ AATATGACGCGCCCCTCCATTGATGATTGACACACACCCCGCTCTCGCACTTCACTTTTG
rJMFF021F11+ AATATGACGCGCCCCTCCATTGATGATTGACACACACCCCGCTCTCGCACTTCACTTTTG
rJMFF039P20+ AATATGACGCGCCCCTCCATTGATGATTGACACACACCCCGCTCTCGCACTTCACTTTTG
rJMFF047L05+ AATATGACGCGCCCCTCCATTGATGATTGACACACACCCCGCTTTCGCACTTCACTTTTG
JMFN034F08- AATATGACGCGCCCCTCCATTGATGATTGACACACACCCCGCTCTCGCACTTCACTTTTG
____________________________________________________________
consensus AATATGACGCGCCCCTCCATTGATGATTGACACACACCCCGCTCTCGCACTTCACTTTTG
. : . : . : . : . : . :
rJMSF014F16+ TATTTTCTTCCCTCAGAAGGTTGAATCCCCAACTCCAAGGGTCTCTCATATCCCAGCTCG
rJMFF021F11+ TATTTTCTTCCCTCAGAAGGTTGAATCCCCAACTCCAAGGGTCTCTCATATCCCAGCTCG
rJMFF039P20+ TATTTTCTTCCCTCAGAAGGTTGAATCCCCAACTCCAAGGGTCTCTCATATCCCAGCTCG
rJMFF047L05+ TATTTTCTTCCCTCAGAAGGTTGAATCCCCAACTCCAAGGGTCTTTCATATCCCAGCTCG
JMFN034F08- TATTTTCTTCCCTCAGAAGGTTGAATCCCCAACTCCAAGGGTCTCTCATATCCCAGCTCG
____________________________________________________________
consensus TATTTTCTTCCCTCAGAAGGTTGAATCCCCAACTCCAAGGGTCTCTCATATCCCAGCTCG
. : . : . : . : . : . :
rJMSF014F16+ ACTGAGCATTTGGGAGGCATTTTTAAAGTTTATGGATTCAGGATAAGTGTGTCCTATTGC
rJMFF021F11+ ACTGAGCATTTGGGAGGCATTTTTAAAGTTTATGGATTCAGGATAAGTGTGTCCTATTGC
rJMFF039P20+ ACTGAGCATTTGGGAGGCATTTTTAAAGTTTATGGATTCAGGATAAGTGTGTCCTATTGC
rJMFF047L05+ ACTGAGCATTTGGGAGGCATTTTTAAAGTTTATGGATTCAGGATAAGTGTGTCCTATTGC
JMFN034F08- ACTGAGCATTTGGGAGGCATTTTTAAAGTTTATGGATTCAGGATAAGTGTGTCCTATTGC
____________________________________________________________
consensus ACTGAGCATTTGGGAGGCATTTTTAAAGTTTATGGATTCAGGATAAGTGTGTCCTATTGC
. : . : . : . : . : . :
rJMSF014F16+ TTGACAAACAAAGAACAATGCAGATT
rJMFF021F11+ TTGACAAACAAAGAACAATGCAGATTTGGAGGAAATAAATAG
rJMFF039P20+ TTGACAAACAAAGAACAATGCAGATTTGGAGGAAATAAATAG
rJMFF047L05+ TTGACAAACAAAGAACAATGCAGATTTGGAGGAAATAAATAGTGAAAAATCCATTGGCTT
JMFN034F08- TTGACAAACAAAGAACAATGCAGATTTGGAGGAAATAAATAGTGAAAAATCCATTGGCTT
____________________________________________________________
consensus TTGACAAACAAAGAACAATGCAGATTTGGAGGAAATAAATAGTGAAAAATCCATTGGCTT