Contig 003340:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN013I17+                              AATGTGAAACCTAATTCATTACAAAAAATGTGAAAAAACAG
JMFN013A16+                                                             GAAAAAACAG
JMFN034E17+                                                             GAAAAAACAG
                      ____________________________________________________________
consensus                                AATGTGAAACCTAATTCATTACAAAAAATGTGAAAAAACAG
 
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JMFN013I17+           ATCATTGTATTGGCAACAAAAGGCTCATTCCCAATGGAAAACACTTTGTTTGATAACTTC
JMFN013A16+           ATCATTGTATTGGCAACAAAAGGCTCATTCCCAATGGAAAACACTTTGTTTGATAACTTC
JMFN034E17+           ATCATTGTATTGGCAACAAAAGGCTCATTCCCAATGGAAAACACTTTGTTTGATAACTTC
                      ____________________________________________________________
consensus             ATCATTGTATTGGCAACAAAAGGCTCATTCCCAATGGAAAACACTTTGTTTGATAACTTC
 
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JMFN013I17+           AGGAATATAAATTTAGAGCGCTGGAAAAAGAAAAATAAAGGCAGATTTTAATCTGCATCC
JMFN013A16+           AGGAATATAAATTTAGAGCGCTGGAAAAAGAAAAATAAAGGCAGATTTTAATCTGCATCC
JMFN034E17+           AGGAATATAAATTTAGAGCGCTGGAAAAAGAAAAATAAAGGCAGATTTTAATCTGCATCC
                      ____________________________________________________________
consensus             AGGAATATAAATTTAGAGCGCTGGAAAAAGAAAAATAAAGGCAGATTTTAATCTGCATCC
 
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JMFN013I17+           TCAGCCTTGGGTTGCTCGAGGGAAGCCTGAGCATTGGAGAGGGCCTCCAATACTATTGCA
JMFN013A16+           TCAGCCTTGGGTTGCTCGAGGGAAGCCTGAGCATTGGAGAGGGCCTCCAATACTATTGCA
JMFN034E17+           TCAGCCTTGGGTTGCTCGAGGGAAGCCTGAGCATTGGAGAGGGCCTCCAATACTATTGCA
                      ____________________________________________________________
consensus             TCAGCCTTGGGTTGCTCGAGGGAAGCCTGAGCATTGGAGAGGGCCTCCAATACTATTGCA
 
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JMFN013I17+           GCGTGGTACTGAATATTACCGCACATGAGCTGGGATTCGGGTTCAGATTGGGAGTCCGTC
JMFN013A16+           GCGTGGTACTGAATATTACCGCACATGAGCTGGGATTCGGGTTCAGATTGGGAGTCCGTC
JMFN034E17+           GCGTGGTACTGAATATTACCGCACATGAGCTGGGATTCGGGTTCAGATTGGGAGTCCGTC
                      ____________________________________________________________
consensus             GCGTGGTACTGAATATTACCGCACATGAGCTGGGATTCGGGTTCAGATTGGGAGTCCGTC
 
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JMFN013I17+           TCTATGTTCATCTTCTCCAGCTCCTGACTGATATGCTGGAGGGAGTCTTGAGCTTGTGCA
JMFN013A16+           TCTATGTTCATCTTCTCCAGCTCCTGACTGATATGCTGGAGGGAGTCTTGAGCTTGTGCA
JMFN034E17+           TCTATGTTCATCTTCTCCAGCTCCTGACTGATATGCTGGAGGGAGTCTTGAGCTTGTGCA
                      ____________________________________________________________
consensus             TCTATGTTCATCTTCTCCAGCTCCTGACTGATATGCTGGAGGGAGTCTTGAGCTTGTGCA
 
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JMFN013I17+           ATGAAATCCATGCTCTTACCTACTGCTTTATGTAACTTCTCCTTTGAGGCTAAAAGATTA
JMFN013A16+           ATGAAATCCATGCTCTTACCTACTGCTTTATGTAACTTCTCCTTTGAGGCTAAAAGATTA
JMFN034E17+           ATGAAATCCATGCTCTTACCTACTGCTTTATGTAACTTCTCCTTTGAGGCTAAAAGATTA
                      ____________________________________________________________
consensus             ATGAAATCCATGCTCTTACCTACTGCTTTATGTAACTTCTCCTTTGAGGCTAAAAGATTA
 
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JMFN013I17+           GTGATATGCGCTTCTTTTAAATTCATGATAGTAATCCAACCCTGCATCATCAGTTCCCTT
JMFN013A16+           GTGATATGCGCTTCTTTTAAATTCATGATAGTAATCCAACCCTGCATCATCAGTTCCCTT
JMFN034E17+           GTGATATGCGCTTCTTTTAAATTCATGATAGTAATCCAACCCTGCATCATCAGTTCCCTT
                      ____________________________________________________________
consensus             GTGATATGCGCTTCTTTTAAATTCATGATAGTAATCCAACCCTGCATCATCAGTTCCCTT
 
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JMFN013I17+           GTCTGCATACTTCGAGACGAGGGCGGAGAGCGAGCTGTAGAAGGGGATGGCGTC      
JMFN013A16+           GTCTGCATACTTCGAGACGAGGGCGGAGAGCGAGCTGTAGAAGGGGATGGCGTC      
JMFN034E17+           GTCTGCATACTTCGAGACGAGGGCGGAGAGCGAGCTGTAGAAGGGGATGGCGTCATGGCG
                      ____________________________________________________________
consensus             GTCTGCATACTTCGAGACGAGGGCGGAGAGCGAGCTGTAGAAGGGGATGGCGTCATGGCG