Contig 003335:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011B22Sequence635003335 (4)ref|XP_006342278.1|181PREDICTED: uncharacterized protein LOC102593420 [Solanum tuberosum]
JMFN025J03Sequence603003335 (4)
JMSF001C09Sequence226003499 (6)773003335 (4)ref|XP_006363000.1|99.4PREDICTED: uncharacterized protein LOC102589507 [Solanum tuberosum]
JMSF046H19Sequence743003499 (6)emb|CDP20584.1|7e-46unnamed protein product [Coffea canephora]653003335 (4)

Alignment

This contig is upended


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JMFN011B22-                                                               GTCATCAG
                      ____________________________________________________________
consensus                                                                 GTCATCAG
 
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JMFN011B22-           ATTGGAATAGAGCAACCCCAGATGAAGTGAGGCACCAGTATGAGATGGTGGAGATTCTTG
                      ____________________________________________________________
consensus             ATTGGAATAGAGCAACCCCAGATGAAGTGAGGCACCAGTATGAGATGGTGGAGATTCTTG
 
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JMFN011B22-           ATGGATATTCTGAAGAGTTTGGTGTCCATGTTGCCCCTTTGATAAAATTAGGCAGGTTCA
                      ____________________________________________________________
consensus             ATGGATATTCTGAAGAGTTTGGTGTCCATGTTGCCCCTTTGATAAAATTAGGCAGGTTCA
 
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JMFN011B22-           AGACAGTTTACAGAAGGAACTCAGACCAGGGGGCCAGTCGGTGGATTCCAAAAAGAGAGA
rJMSF001C09+                                          GCCAGTCGGTGGATTCCCAAAAGAGAGA
                      ____________________________________________________________
consensus             AGACAGTTTACAGAAGGAACTCAGACCAGGGGGCCAGTCGGTGGATTCCCAAAAGAGAGA
 
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JMFN011B22-           TGTTGCGATTTTCACACATGGTTCCTTCTTGTTTACTGAAAGAAGGTCCTAACCTGCCAG
rJMSF001C09+          TGTTGCGATTTTCACACATGGTTCCTTCTTGTTTACTGAAAGAAGGTCCTAACCTGCCAG
                      ____________________________________________________________
consensus             TGTTGCGATTTTCACACATGGTTCCTTCTTGTTTACTGAAAGAAGGTCCTAACCTGCCAG
 
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JMFN011B22-           ATGGATGCTGGGATCTTGACCCTGCTGCAACCCCAGAAGAACTTCTCCAGGGAGCAAATC
rJMSF046H19+                                        CCCCAGAAGAACTTCTCCAGGGAGCAAATC
rJMSF001C09+          ATGGATGCTGGGATCTTGACCCTGCTGCAACCCCAGAAGAACTTCTCCAGGGAGCAAATC
                      ____________________________________________________________
consensus             ATGGATGCTGGGATCTTGACCCTGCTGCAACCCCAGAAGAACTTCTCCAGGGAGCAAATC
 
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JMFN011B22-           ATGTAGAGGATG-AAAGTCATGCTGGAAACAATAATGCAGATGAACATTCCAAGAATAAA
rJMSF046H19+          ATGTAGAGGATGAAAAGTCATGCTGGAAACAATAATGCAGATGAACATTCCAAGAATAAA
rJMSF001C09+          ATGTAGAGGATG-AAAGTCATGCTGGAAACAATAATGCAGATGAACATTCCAAGAATAAA
JMFN025J03-                                                                   TAAA
                      ____________________________________________________________
consensus             ATGTAGAGGATG-AAAGTCATGCTGGAAACAATAATGCAGATGAACATTCCAAGAATAAA
 
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JMFN011B22-           ATAGAACACAGGGCTGAAGAGAAGATAGGGCAAGCAGAAAGCACAGTACTTCCAGGTAAG
rJMSF046H19+          ATAGAACACAGGGCTGAAGAGAAGATAGGGCAAGCAGAAAGCACAGTACTTCCAGGTAAG
rJMSF001C09+          ATAGAACACAGGGCTGAAGAGAAGATAGGGCAAGCAGAAAGCACAGTACTTCCAGGTAAG
JMFN025J03-           ATAGAACACAGGGCTGAAGAGAAGATAGGGCAAGCAGAAAGCACAGTACTTCCAGGTAAG
                      ____________________________________________________________
consensus             ATAGAACACAGGGCTGAAGAGAAGATAGGGCAAGCAGAAAGCACAGTACTTCCAGGTAAG
 
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JMFN011B22-           TCTCATGAATCTGTTAGTGGAGTGCAGGTTCAAGATATCCCAAATCAAGCACAAAACCCT
rJMSF046H19+          TCTCATGAATCTGTTAGTGGAGTGCAGGTTCAAGATATCCCAAATCAAGCACAAAACCCT
rJMSF001C09+          TCTCATGAATCTGTTAGTGGAGTGCAGGTTCAAGATATCCCAAATCAAGCACAAAACCCT
JMFN025J03-           TCTCATGAATCTGTTAGTGGAGTGCAGGTTCAAGATATCCCAAATCAAGCACAAAACCCT
                      ____________________________________________________________
consensus             TCTCATGAATCTGTTAGTGGAGTGCAGGTTCAAGATATCCCAAATCAAGCACAAAACCCT
 
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JMFN011B22-           CCTGAACCTCCTCCTGGGTTTCCTGTCATCCCAAATCAAGCACAAAACCCTCCCGAACCT
rJMSF046H19+          CCTGAACCTCCTCCTGGGTTTCCTGTCATCCCAAATCAAGCACAAAACCCTCCCGAACCT
rJMSF001C09+          CCTGAACCTCCTCCTGGGTTTCCTGTCATCCCAAATCAAGCACAAAACCCTCCCGAACCT
JMFN025J03-           CCTGAACCTCCTCCTGGGTTTCCTGTCATCCCAAATCAAGCACAAAACCCTCCCGAACCT
                      ____________________________________________________________
consensus             CCTGAACCTCCTCCTGGGTTTCCTGTCATCCCAAATCAAGCACAAAACCCTCCCGAACCT
 
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JMFN011B22-           CCTCCTGGGTTTCCCGTCGTCATAACAGACATTCAAAACAGANAAGAGGCTTGCCAGACA
rJMSF046H19+          CCTCCTGGGTTTCCCGTCGTCATAACAGACATTCAAAACAGAAAAGAGGCTTGCCAGACA
rJMSF001C09+          CCTCCTGGGTTTCCCGTCGTCATAACAGACATTCAAAACAGAAAAGAGGCTTGCCAGACA
JMFN025J03-           CCTCCTGGGTTTCCCGTCGTCATAACAGACATTCAAAACAGAAAAGAGGCTTGCCAGACA
                      ____________________________________________________________
consensus             CCTCCTGGGTTTCCCGTCGTCATAACAGACATTCAAAACAGAAAAGAGGCTTGCCAGACA
 
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JMFN011B22-           CAAATTTTCAGCTCGTGAGTGTAACCTC                                
rJMSF046H19+          CAAATTTTCAGCTCGTGAGTGTAACCTCCTAGCCCTAGGTGAGGAAGGAAGGGAATGATG
rJMSF001C09+          CAAATTTTCAGCTCGTGAGTGTAACCTCCTAGCCCTAGGTGAGGAAGGAAGGGAATGATG
JMFN025J03-           CAAATTTTCAGCTCGTGAGTGTAACCTCCTAGCCCTAGGTGAGGAAGGAAGGGAATGATG
                      ____________________________________________________________
consensus             CAAATTTTCAGCTCGTGAGTGTAACCTCCTAGCCCTAGGTGAGGAAGGAAGGGAATGATG
 
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rJMSF046H19+          AAGAAGAAATAGAAGATTTGAGTTGGAAGGTCCCATTGTCACCACTGTTCTAACAGCATT
rJMSF001C09+          AAGAAGAAATAGAAGATTTGAGTTGGAAGGTCCCATTGTCACCACTGTTCTAACAGCATT
JMFN025J03-           AAGAAGAAATAGAAGATTTGAGTTGGAAGGTCCCATTGTCACCACTGTTCTAACAGCATT
                      ____________________________________________________________
consensus             AAGAAGAAATAGAAGATTTGAGTTGGAAGGTCCCATTGTCACCACTGTTCTAACAGCATT
 
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rJMSF046H19+          GAGATTCAATTTGTACAGATTTACACAGCCAATGAAGAAATGTTGAGACATTTATTTAGA
rJMSF001C09+          GAGATTCAATTTGTACAGATTTACACAGCCAATGAAGAAATGTTGAGACATTTATTTAGA
JMFN025J03-           GAGATTCAATTTGTACAGATTTACACAGCCAATGAAGAAATGTTGAGACATTTATTTAGA
                      ____________________________________________________________
consensus             GAGATTCAATTTGTACAGATTTACACAGCCAATGAAGAAATGTTGAGACATTTATTTAGA
 
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rJMSF046H19+          TAGCTGGGAGGATCAGAATTGATCCGTAACATATAGGACCAATTGTTGTAGGCGGCTCTT
rJMSF001C09+          TAGCTGGGAGGATCAGAATTGATCCGTAACATATAGGACCAATTGTTGTAGGCGGCTCTT
JMFN025J03-           TAGCTGGGAGGATCAGAATTGATCCGTAACATATAGGACCAATTGTTGTAGGCGGCTCTT
                      ____________________________________________________________
consensus             TAGCTGGGAGGATCAGAATTGATCCGTAACATATAGGACCAATTGTTGTAGGCGGCTCTT
 
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rJMSF046H19+          AATCTGTTTCCAGTCATCTCATCTGTAATAGTAATTTAGATTTATGGACGGACAGA-CAA
rJMSF001C09+          AATCTGTTTCCAGTCATCTCATCTGTAATAGTAATTTAGATTTATGGACGGACAGACCAA
JMFN025J03-           AATCTGTTTCCAGTCATCTCATCTGTAATAGTAATTTAGATTTATGGACGGACAGA-CAA
                      ____________________________________________________________
consensus             AATCTGTTTCCAGTCATCTCATCTGTAATAGTAATTTAGATTTATGGACGGACAGA-CAA
 
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rJMSF046H19+          GACACCTTTTGTTAGATCTCAATT                                    
rJMSF001C09+          GACACCTTTTGTTAGATCTCAATT                                    
JMFN025J03-           GACACCTTTTGTTAGATCTCAATTTATCATAGAGAATGAACCCCCATAGCTTCAGGCTTN
                      ____________________________________________________________
consensus             GACACCTTTTGTTAGATCTCAATTTATCATAGAGAATGAACCCCCATAGCTTCAGGCTTN