| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN010J05 | Sequence | 625 | 003333 (10) | ref|XP_009799759.1| | 207 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] | |||||
| JMFN011J20 | Sequence | 597 | 003333 (10) | ref|XP_009799759.1| | 204 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] | |||||
| JMFN025G21 | Sequence | 616 | 003333 (10) | ref|XP_009799759.1| | 204 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] | |||||
| JMFN037L03 | Sequence | 530 | 003333 (10) | ref|XP_009799759.1| | 207 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] | |||||
| JMSF002K06 | Sequence | 411 | 003333 (10) | ref|XP_009799759.1| | 207 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] | 585 | 003333 (10) | ref|XP_009799759.1| | 207 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] |
| JMSF021B24 | Sequence | 601 | 003333 (10) | ref|XP_009799759.1| | 207 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] | 579 | 003333 (10) | ref|XP_009799759.1| | 207 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] |
| JMSF028O17 | Sequence | 615 | 003333 (10) | ref|XP_009799759.1| | 204 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] | 569 | 003333 (10) | ref|XP_009799759.1| | 204 | PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFN011J20+ AATGTATTATCATTG
JMFN010J05+ AATGGGAAAAATTCAACTTTTCATAGTATACTGAGGAAATGTATTATCATTG
rJMSF002K06- G
JMSF028O17+ AATGTATTATCATTG
JMFN025G21+ AATGTATTATCATTG
____________________________________________________________
consensus AATGGGAAAAATTCAACTTTTCATAGTATACTGAGGAAATGTATTATCATTG
. : . : . : . : . : . :
rJMSF021B24- AACATTGCAGTAAATTGAAGTTATTCCGGAACAAA
JMSF021B24+ AAACAACACAATATTACCA-GGTTAAACATTGCAGTAAATTGAAGTTATTCCGGAACAAA
JMFN011J20+ AAACAACACAATATTACCA-GGTTAAACATTGCAAGAAATTGAAGTTATTCCGGAAAAAA
JMFN010J05+ AAACAACACAATATTACCA-GGTTAAACATTGCAGTAAATTGAAGTTATTCCGGAACAAA
rJMSF002K06- AAACAACACAATATTACCAGGGTTAAACATTGCAGTAAATTGAAGTTATTCCGGAACAAA
JMSF028O17+ AAACAACACAATATTACCA-GGTTAAACATTGCAAGAAATTGAAGTTATTCCGGAAAAAA
rJMSF028O17- AACATTGCAAGAAATTGAAGTTATTCCGGAAAAAA
JMFN025G21+ AAACAACACAATATTACCA-GGTTAAACATTGCAAGAAATTGAAGTTATTCCGGAAAAAA
____________________________________________________________
consensus AAACAACACAATATTACCA-GGTTAAACATTGCAGTAAATTGAAGTTATTCCGGAACAAA
. : . : . : . : . : . :
rJMSF021B24- GTCGTAAGCTACCAATTCAAATCATGAGTTAATAAAC-GCAATGCTTATTTTT-CAACAA
JMSF021B24+ GTCGTAAGCTACCAATTCAAATCATGAGTTAATAAAC-GCAATGCTTATTTTT-CAACAA
JMFN011J20+ GTCGTAAGCTACCAATTCAAATCACGAGTTAATAAACAGCAATGCTTATTTTTCCAACAA
JMFN010J05+ GTCGTAAGCTACCAATTCAAATCATGAGTTAATAAAC-GCAATGCTTATTTTT-CAACAA
rJMSF002K06- GTCGTAAGCTACCAATTCAAATCATGAGTTAATAAAC-GCAATGCTTATTTTT-CAACAA
JMSF028O17+ GTCGTAAGCTACCAATTCAAATCACGAGTTAATAAACAGCAATGCTTATTTTTCCAACAA
rJMSF028O17- GTCGTAAGCTACCAATTCAAATCACGAGTTAATAAACAGCAATGCTTATTTTTCCAACAA
JMFN037L03+ GTAAGCTACCAATTCAAATCATGAGTTAATAAAC-GCAATGCTTATTTTT-CAACAG
JMFN025G21+ GTCGTAAGCTACCAATTCAAATCACGAGTTAATAAACAGCAATGCTTATTTTTCCAACAA
____________________________________________________________
consensus GTCGTAAGCTACCAATTCAAATCATGAGTTAATAAAC-GCAATGCTTATTTTT-CAACAA
. : . : . : . : . : . :
rJMSF021B24- CTGCACCAAAAAATATCAACAGAAGACTTCCCCATCTTCTCTTCCAAAACCCTAACTTAG
JMSF021B24+ CTGCACCAAAAAATATCAACAGAAGACTTCCCCATCTTCTCTTCCAAAACCCTAACTTAG
JMFN011J20+ CTGCACCAGAAAATATCAACA-AAGACTTCCCCGTCTTCTCTTCCAAAACCCTAACTTAG
JMFN010J05+ CTGCACCAAAAAATATCAACAGAAGACTTCCCCATCTTCTCTTCCAAAACCCTAACTTAG
JMSF002K06+ AAACCCTAACTTAG
rJMSF002K06- CTGCACCAAAAAATATCAACAGAAGACTTCCCCATCTTCTCTTCCAAAACCCTAACTTAG
JMSF028O17+ CTGCACCAGAAAATATCAACA-AAGACTTCCCCGTCTTCTCTTCCAAAACCCTAACTTAG
rJMSF028O17- CTGCACCAGAAAATATCAACA-AAGACTTCCCCGTCTTCTCTTCCAAAACCCTAACTTAG
JMFN037L03+ CTGCACCAAAAAATATCAACAGAAGACTTCCCCATCTTCTCTTCCAAAACCCTAACTTAG
JMFN025G21+ CTGCACCAGAAAATATCAACA-AAGACTTCCCCGTCTTCTCTTCCAAAACCCTAACTTAG
____________________________________________________________
consensus CTGCACCAAAAAATATCAACAGAAGACTTCCCCATCTTCTCTTCCAAAACCCTAACTTAG
. : . : . : . : . : . :
rJMSF021B24- AAAAATTTCCAAAGTAGGGCGAATCAAAAGCATACCA----AGATAGATTGATCCGATCA
JMSF021B24+ AAAAATTTCCAAAGTAGGGCGAATCAAAAGCATACCA----AGATAGATTGATCCGATCA
JMFN011J20+ -AAAATTTCCAAACAAGGGCGAATCAAAAGCATACCAAGATAGATAGATCGATCCGATCA
JMFN010J05+ AAAAATTTCCAAAGTAGGGCGAATCAAAAGCATACCA----AGATAGATTGATGCGATCA
JMSF002K06+ AAAAATTTCCAAAGTAGGGCGAATCAAAAGCATACCA----AGATAGATTGATCCGATCA
rJMSF002K06- AAAAATTTCCAAAGTAGGGCGAATCAAAAGCATACCA----AGATAGATTGATCCGATCA
JMSF028O17+ -AAAATTTCCAAACAAGGGCGAATCAAAAGCATACCAAGATAGATAGATCGATCCGATCA
rJMSF028O17- -AAAATTTCCAAACAAGGGCGAATCAAAAGCATACCAAGATAGATAGATCGATCCGATCA
JMFN037L03+ AAAAATTTCCAAAGTAGGGCGAATCAAAAGCATACCA----AGATAGATTGATCCGATCA
JMFN025G21+ -AAAATTTCCAAACAAGGGCGAATCAAAAGCATACCAAGATAGATAGATCGATCCGATCA
____________________________________________________________
consensus AAAAATTTCCAAAGTAGGGCGAATCAAAAGCATACCA----AGATAGATTGATCCGATCA
. : . : . : . : . : . :
rJMSF021B24- GTCACTCGGACTCGAGCTCGAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
JMSF021B24+ GTCACTCGGACTCGAGCTCGAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
JMFN011J20+ GTCATTCGGACTCAAGCTCCAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
JMFN010J05+ GTCACTCGGACTCGAGCTCGAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
JMSF002K06+ GTCACTCGGACTCGAGCTCGAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
rJMSF002K06- GTCACTCGGACTCGAGCTCGAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
JMSF028O17+ GTCATTCGGACTCAAGCTCCAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
rJMSF028O17- GTCATTCGGACTCAAGCTCCAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
JMFN037L03+ GTCACTCGGACTCGAGCTCGAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
JMFN025G21+ GTCATTCGGACTCAAGCTCCAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
____________________________________________________________
consensus GTCACTCGGACTCGAGCTCGAGCCGTTTGATGGCTTCCTGATGGGCCCAGGTCTCGATAG
. : . : . : . : . : . :
rJMSF021B24- TGAGATCGGGCTTGGCGTTCAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
JMSF021B24+ TGAGATCGGGCTTGGCGTTCAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
JMFN011J20+ TGAGATCGGGCTTGGCGTTGAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
JMFN010J05+ TGAGATCGGGCTTGGCGTTCAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
JMSF002K06+ TGAGATCGGGCTTGGCGTTCAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
rJMSF002K06- TGAGATCGGGCTTGGCGTTCAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
JMSF028O17+ TGAGATCGGGCTTGGCGTTGAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
rJMSF028O17- TGAGATCGGGCTTGGCGTTGAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
JMFN037L03+ TGAGATCGGGCTTGGCGTTCAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
JMFN025G21+ TGAGATCGGGCTTGGCGTTGAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
____________________________________________________________
consensus TGAGATCGGGCTTGGCGTTCAGCCCCACGCCGAGGATCACAATGGTGAGAAAGCTGGTGA
. : . : . : . : . : . :
rJMSF021B24- CGTAGCACGGCAGCTCCCAATCCTCCCATTTCCGGGATTGCCCAGGCGGCGGCGGCGTAC
JMSF021B24+ CGTAGCACGGCAGCTCCCAATCCTCCCATTTCCGGGATTGCCCAGGCGGCGGCGGCGTAC
JMFN011J20+ CGTAGCACGGCAGCTCCCAGTCCTCCCATTTCCGGGATTGCCCCAGCGGCGGCGGCGTAC
JMFN010J05+ CGTAGCACGGCAGCTCCCAATCCTCCCATTTCCGGGATTGCCCAGGCGGCGGCGGCGTAC
JMSF002K06+ CGTAGCACGGCAGCTCCCAATCCTCCCATTTCCGGGATTGCCCAGGCGGCGGCGGCGTAC
rJMSF002K06- CGTAGCACGGCAGCTCCCAATCCTCCCATTTCCGGGATTGCCCAGGCGGCGGCGGCGTAC
JMSF028O17+ CGTAGCACGGCAGCTCCCAGTCCTCCCATTTCCGGGATTGCCCCAGCGGCGGCGGCGTAC
rJMSF028O17- CGTAGCACGGCAGCTCCCAGTCCTCCCATTTCCGGGATTGCCCCAGCGGCGGCGGCGTAC
JMFN037L03+ CGTAGCACGGCAGCTCCCAATCCTCCCATTTCCGGGATTGCCCAGGCGGCGGCGGCGTAC
JMFN025G21+ CGTAGCACGGCAGCTCCCAGTCCTCCCATTTCCGGGATTGCCCCAGCGGCGGCGGCGTAC
____________________________________________________________
consensus CGTAGCACGGCAGCTCCCAATCCTCCCATTTCCGGGATTGCCCAGGCGGCGGCGGCGTAC
. : . : . : . : . : . :
rJMSF021B24- GGCTGAAGAGGTAGCCATTGGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGATTCGGGC
JMSF021B24+ GGCTGAAGAGGTAGCCATTGGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGATTCGGGC
JMFN011J20+ GGCTGAAGAGGTAGCCATTAGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGGTTCGGGC
JMFN010J05+ GGCTGAAGAGGTAGCCATTGGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGATTCGGGC
JMSF002K06+ GGCTGAAGAGGTAGCCATTGGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGATTCGGGC
rJMSF002K06- GGCTGAAGAGGTAGCCATTGGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGATTCGGGC
JMSF028O17+ GGCTGAAGAGGTAGCCATTAGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGGTTCGGGC
rJMSF028O17- GGCTGAAGAGGTAGCCATTAGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGGTTCGGGC
JMFN037L03+ GGCTGAAGAGGTAGCCATTGGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGATTCGGGC
JMFN025G21+ GGCTGAAGAGGTAGCCATTAGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGGTTCGGGC
____________________________________________________________
consensus GGCTGAAGAGGTAGCCATTGGGGCGCTCCTGGTGGCCGGGAGTAAGGAATGGATTCGGGC
. : . : . : . : . : . :
rJMSF021B24- CATGTCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
JMSF021B24+ CATGTCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
JMFN011J20+ CATGCCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
JMFN010J05+ CATGTCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
JMSF002K06+ CATGTCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
rJMSF002K06- CATGTCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
JMSF028O17+ CATGCCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
rJMSF028O17- CATGCCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
JMFN037L03+ CATGTCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
JMFN025G21+ CATGCCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
____________________________________________________________
consensus CATGTCCTCCTCGGGTTCGAAGGCCCGAGCTCAATCTGGATTTCAGCATCCCTGCGGCGG
. : . : . : . : . : . :
rJMSF021B24- TCGCGAAGGGTTTCGCGGACGGCATCTTTG
JMSF021B24+ TCGCGAAGGGTTTCGCGGACGGCATCTTTG
JMFN011J20+ TCGCGAAGGGTTTCGCGGACGGCATCTTT
JMFN010J05+ TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCT
JMSF002K06+ TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCT
rJMSF002K06- TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCT
JMSF028O17+ TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCGAAAACAGAGCTG
rJMSF028O17- TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCGAAAACAGAGCTG
JMFN037L03+ TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCTAAAACAGAGCTGCGAACTT
JMFN025G21+ TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCGAAAACAGAGCTGTGAACTTG
____________________________________________________________
consensus TCGCGAAGGGTTTCGCGGACGGCATCTTTGCTTAACTGCTAAAACAGAGCTGTGAACTTG