Contig 003330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044L03Sequence520003330 (7)gb|EPS65822.1|9e-47hypothetical protein M569_08957 [Genlisea aurea]519003330 (7)gb|EPS65822.1|9e-47hypothetical protein M569_08957 [Genlisea aurea]
JMFN018D17Sequence496003330 (7)gb|EPS65822.1|7e-47hypothetical protein M569_08957 [Genlisea aurea]
JMFS155D03Sequence481003330 (7)gb|EPS65822.1|4e-47hypothetical protein M569_08957 [Genlisea aurea]
JMSF024G13Sequence502003330 (7)gb|EPS65822.1|4e-47hypothetical protein M569_08957 [Genlisea aurea]443003330 (7)gb|EPS65822.1|2e-47hypothetical protein M569_08957 [Genlisea aurea]
JMSF044C01Sequence505003330 (7)gb|EPS65822.1|8e-47hypothetical protein M569_08957 [Genlisea aurea]709011714 (5)emb|CDP03683.1|8e-66unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF024G13+                                            TTTTTTTTTTGCTAGTAAAAACTGAAT
JMSF044C01+                                                     TGCTAGTAAAAACTGAAT
JMFS155D03+                                                         AGTAAAAACTGAAT
JMFN018D17+                                                       CTAGTAAAAACTGAAT
                      ____________________________________________________________
consensus                                              TTTTTTTTTTGCTAGTAAAAACTGAAT
 
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JMSF024G13+           CTTTCATTCAATAACATAATCTGTCAGATGCATAATTTCAAACGCCGCAAATCTGAAACG
JMSF044C01+           CTTTCATTCAATAACATAATCTGTCAGATGCATAATTTCAAACGCCGCAAATCTGAAACG
JMFS155D03+           CTTTCATTCAATAACATAATCTGTCAGATGCATAATTTCAAACGCCGCAAATCTGAAACG
rJMSF024G13-                                                  AACGCCGCAAATCTGAAACG
JMFN018D17+           CTTTCATTCAATAACATAATCTGTCAGATGCATAATTTCAAACGCCGCAAATCTGAAACG
                      ____________________________________________________________
consensus             CTTTCATTCAATAACATAATCTGTCAGATGCATAATTTCAAACGCCGCAAATCTGAAACG
 
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JMSF024G13+           TGAGTCTTAAAACAAATAAAATATCTATCAGAACTCAAAAATTAGGCATATCAGTTCCCC
JMSF044C01+           TGAGTCTTAAAACAAATAAAATATCTATCAGAACTCAAAAATTAGGCATATCAGTTCCCC
JMFS155D03+           TGAGTCTTAAAACAAATAAAATATCTATCAGAACTCAAAAATTAGGCATATCAGTTCCCC
rJMSF024G13-          TGAGTCTTAAAACAAATAAAATATCTATCAGAACTCAAAAATTAGGCATATCAGTTCCCC
rJMFF044L03-                                         AACTCAAAAATTAGGCATATCAGTTCCCC
JMFF044L03+                                          AACTCAAAAATTAGGCATATCAGTTCCCC
JMFN018D17+           TGAGTCTTAAAACAAATAAAATATCTATCAGAACTCAAAAATTAGGCATATCAGTTCCCC
                      ____________________________________________________________
consensus             TGAGTCTTAAAACAAATAAAATATCTATCAGAACTCAAAAATTAGGCATATCAGTTCCCC
 
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JMSF024G13+           ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
JMSF044C01+           ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
JMFS155D03+           ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
rJMSF024G13-          ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
rJMFF044L03-          ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
JMFF044L03+           ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
JMFN018D17+           ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
                      ____________________________________________________________
consensus             ATTAAACTTCAAACAGAAACAGGACAACGGTCTGTTATTAGTCACCCTTTCTTCTGAAAG
 
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JMSF024G13+           AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
JMSF044C01+           AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
JMFS155D03+           AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
rJMSF024G13-          AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
rJMFF044L03-          AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
JMFF044L03+           AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
JMFN018D17+           AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
                      ____________________________________________________________
consensus             AGCATCCCTCTGTGAGCCTGGCACGCCCACCAGTCGGCTGGCACAACACTGTCTGGCAGT
 
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JMSF024G13+           TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
JMSF044C01+           TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
JMFS155D03+           TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
rJMSF024G13-          TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
rJMFF044L03-          TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
JMFF044L03+           TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
JMFN018D17+           TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
                      ____________________________________________________________
consensus             TCCCACACACCACAACTGTCTGGGAGTGACTGAACACAGTTGTTATGTTAAAGCAGCCTT
 
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JMSF024G13+           GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
JMSF044C01+           GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
JMFS155D03+           GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
rJMSF024G13-          GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
rJMFF044L03-          GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
JMFF044L03+           GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
JMFN018D17+           GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
                      ____________________________________________________________
consensus             GGCACTTGACATCCATGAAGAAAGAGTTGGGAGACTGCACGAGACGCTTGAGCTTGTGCT
 
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JMSF024G13+           TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
JMSF044C01+           TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
JMFS155D03+           TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
rJMSF024G13-          TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
rJMFF044L03-          TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
JMFF044L03+           TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
JMFN018D17+           TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
                      ____________________________________________________________
consensus             TCTTCTTCTCGAGCTCGGCAGGAGGGTTCAACAAATCGATGTCGTTCGGTAGAACCATTG
 
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JMSF024G13+           TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAGCTCCGCT      
JMSF044C01+           TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAGCTCCGCTAGC   
JMFS155D03+           TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAG             
rJMSF024G13-          TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAGCTCCGCT      
rJMFF044L03-          TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAGCTCCGCTAGC   
JMFF044L03+           TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAGCTCCGCTAGC   
JMFN018D17+           TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAGCTCCGCTAGCAAA
                      ____________________________________________________________
consensus             TGTTGATGAACGAAAACCCTAGAACGCAAGCTGACGATAAGTTGAAGCTCCGCTAGCAAA