Contig 003329:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032K10+                         TATCCGAGAAATTCAATATTNCCCGTTGAGTTCAACCCGGTGCCG
                      ____________________________________________________________
consensus                            TATCCGAGAAATTCAATATTNCCCGTTGAGTTCAACCCGGTGCCG
 
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rJMSF032K10+          GTTTTTGCCCCACAAGTCACCCGGGAAATGCTCGATATAAGGCCCGGCGAGGCGCTGGCG
                      ____________________________________________________________
consensus             GTTTTTGCCCCACAAGTCACCCGGGAAATGCTCGATATAAGGCCCGGCGAGGCGCTGGCG
 
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rJMSF033K10+                             TCCANCACACCCCGGACGAGAGCGTTGACGTGAGCAATCCT
rJMSF032K10+          GTGAACTTCCCGTTACAGCTCCACCACACCCCGGACGAGAGCGTTGACGTGAGCAATCCT
                      ____________________________________________________________
consensus             GTGAACTTCCCGTTACAGCTCCACCACACCCCGGACGAGAGCGTTGACGTGAGCAATCCT
 
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rJMSF033K10+          CGAGACGGACTTCTAAGGATGGTGAAGTCGCTCTCTCCCAAGGTGGTCNCGTTGGTGGAG
rJMSF032K10+          CGAGACGGACTTCTAAGGATGGTGAAGTCGCTCTCTCCCAAGGTGGTCACGTTGGTGGAG
                      ____________________________________________________________
consensus             CGAGACGGACTTCTAAGGATGGTGAAGTCGCTCTCTCCCAAGGTGGTCACGTTGGTGGAG
 
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rJMSF033K10+          CANGAATCGAACACGAAC                                          
rJMSF032K10+          CAAGAATCGAACACGAACACCGCCCCCTTCTTCAGCAGGTTCATCGAAGCTCTGGAATAC
                      ____________________________________________________________
consensus             CAAGAATCGAACACGAACACCGCCCCCTTCTTCAGCAGGTTCATCGAAGCTCTGGAATAC
 
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rJMSF032K10+          TACTCAGCCATGTTCGAGTCACTGGACGTGGTCCTACCGAGGGACAGGAAGGAGCGCATC
JMFN017K14-                                CTGGACGTGGTCCTACCGAGGGACAGGAAGGAGCGCATC
                      ____________________________________________________________
consensus             TACTCAGCCATGTTCGAGTCACTGGACGTGGTCCTACCGAGGGACAGGAAGGAGCGCATC
 
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rJMSF032K10+          AACGTCGAGCAGCACTGCCTGGCCCGAG-ACATAGTGAACGTGATAGCTTGCGAGGGCAA
JMFN017K14-           AACGTCGAGCAGCACTGCCTGGCCCGAGCACATAGTGAACGTGATAGCTTGCGAGGGCAA
                      ____________________________________________________________
consensus             AACGTCGAGCAGCACTGCCTGGCCCGAGCACATAGTGAACGTGATAGCTTGCGAGGGCAA
 
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rJMSF032K10+          GGAGAGGGTGGAGCGCCACGAGCTGTTAGGGAAGTGGAAATCGAGGTTCACCATGGCAGG
JMFN017K14-           GGAGAGGGTGGAGCGCCACTAGCTGTTAGGGAAGTGGAAATCGAGGTTCACCATGGCAGG
                      ____________________________________________________________
consensus             GGAGAGGGTGGAGCGCCACTAGCTGTTAGGGAAGTGGAAATCGAGGTTCACCATGGCAGG
 
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rJMSF032K10+          ATTTCAACAGTATCCCCTAAGCTCTTACGTCAATTCGGTAATCAAGGGCCTGTTAAAGTG
JMFN017K14-           ATTTCAACAGTATCCCCTAAGCTGTTACGTCAATTCGGTAATCAAGGGCCTGTTAAAGTG
                      ____________________________________________________________
consensus             ATTTCAACAGTATCCCCTAAGCTGTTACGTCAATTCGGTAATCAAGGGCCTGTTAAAGTG
 
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rJMSF032K10+          TTACTCTGAGCATTACACTCTTGTGGAGAAAGATGGGGCTATGCTATTGGGATGGAAGGA
JMFN017K14-           TTACTCTGAGCATTACACTCTTGTGGAGAAAGATGGGGCTATGCTATTGGGATGGAAGGA
                      ____________________________________________________________
consensus             TTACTCTGAGCATTACACTCTTGTGGAGAAAGATGGGGCTATGCTATTGGGATGGAAGGA
 
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rJMSF032K10+          TAGAAACCTCATCTCTGCTTCTGCTTGGCACTGAAACTAAGTCATACAAAAAACATATAC
JMFN017K14-           TAGAAACCTCATCTTTGCTTCTGCTTGGCACTGAAACTAAGTCATACAAAAAACATATAC
                      ____________________________________________________________
consensus             TAGAAACCTCATCTTTGCTTCTGCTTGGCACTGAAACTAAGTCATACAAAAAACATATAC
 
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rJMSF032K10+          TCAGAACTAGAAAGAACCTATTTTGTGTTGTCCTGGGATGAACACAGACACAAAGATTTC
JMFN017K14-           TCAGAACTAGAAAGAACCTATTTTGTTTTGTCCTGGGATGAACACAGACACAAAGATTTC
                      ____________________________________________________________
consensus             TCAGAACTAGAAAGAACCTATTTTGTTTTGTCCTGGGATGAACACAGACACAAAGATTTC
 
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rJMSF032K10+          TTGTTGCAAACATGCACTTAGAAAAT                                  
JMFN017K14-           TTGTTGCAAACATGCACTTACAAAATTTATGATGTTGGTAATTGAAATACATTTCATTTG
                      ____________________________________________________________
consensus             TTGTTGCAAACATGCACTTAGAAAATTTATGATGTTGGTAATTGAAATACATTTCATTTG
 
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JMFN017K14-           TACCTGTAAATTGCAAGAATTAATCATTTATAATACATGGTAATCTTGGTATAGATTTGT
                      ____________________________________________________________
consensus             TACCTGTAAATTGCAAGAATTAATCATTTATAATACATGGTAATCTTGGTATAGATTTGT