Contig 003326:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002D03+                         GTAGAGGGAAGACACCTAGTATTGTTGACAAAGATGATGGTTTAA
                      ____________________________________________________________
consensus                            GTAGAGGGAAGACACCTAGTATTGTTGACAAAGATGATGGTTTAA
 
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rJMSF002D03+          GACAGTTTGATGCCGCTAAATTGAGAAAGCTTAGACCTAGTTTTAAAGAAGGAGGTACTG
                      ____________________________________________________________
consensus             GACAGTTTGATGCCGCTAAATTGAGAAAGCTTAGACCTAGTTTTAAAGAAGGAGGTACTG
 
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rJMSF002D03+          TCACTGCCGGCAATGCTTCTATCATAAGTGATGGAGCTGCTGCACTGGTGCTGGTAAGTG
                      ____________________________________________________________
consensus             TCACTGCCGGCAATGCTTCTATCATAAGTGATGGAGCTGCTGCACTGGTGCTGGTAAGTG
 
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rJMSF002D03+          GGGAAACGGCGCTTAAACTTGGGTTGCGAGTAATTGCGAAGATCAGAGGATATGCAGATG
                      ____________________________________________________________
consensus             GGGAAACGGCGCTTAAACTTGGGTTGCGAGTAATTGCGAAGATCAGAGGATATGCAGATG
 
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rJMSF002D03+          CTGCTCAGGCACCCGAGTTATTTCCAACTGCTCCGGCACTTGCGATACCAAAAGCAATTA
                      ____________________________________________________________
consensus             CTGCTCAGGCACCCGAGTTATTTCCAACTGCTCCGGCACTTGCGATACCAAAAGCAATTA
 
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rJMSF002D03+          AAAACTCTGGTTTGGAGACTTCTGATGTAGATTATTACGAAATAAATGAGGCTTTTTCTG
JMFN014J17-                                                                      G
                      ____________________________________________________________
consensus             AAAACTCTGGTTTGGAGACTTCTGATGTAGATTATTACGAAATAAATGAGGCTTTTTCTG
 
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rJMSF002D03+          TTGTCGCCCTTGCCAACCGAAGACTGCTCAATCTTGATCCTGGAAAACTGAATGTACATG
JMFN014J17-           TTGTCGCCCTTGCCAACCGAAGACTGCTCAATCTTGATCCTGGAAAACTGAATGTACATG
                      ____________________________________________________________
consensus             TTGTCGCCCTTGCCAACCGAAGACTGCTCAATCTTGATCCTGGAAAACTGAATGTACATG
 
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rJMSF002D03+          GAGGAGCTGTGTCTTTGGGACATCCCCTGGGCTGCAGTGGGGCTAGGATCGTGGTAACGT
JMFN014J17-           GAGGAGCTGTGTCTTTGGGACATCCCCTGGGCTGCAGTGGGGCTAGGATCGTGGTAACGT
                      ____________________________________________________________
consensus             GAGGAGCTGTGTCTTTGGGACATCCCCTGGGCTGCAGTGGGGCTAGGATCGTGGTAACGT
 
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rJMSF002D03+          TGTTAGGGGTGCTGAGGGCAAAGAATGGAAAAGTTGGGGCTGCCGGAGTTTGCAATGGAG
JMFN014J17-           TGTTAGGGGTGCTGAGGGCAAAGAATGGAAAAGTTGGGGCTGCCGGAGTTTGCAATGGAG
                      ____________________________________________________________
consensus             TGTTAGGGGTGCTGAGGGCAAAGAATGGAAAAGTTGGGGCTGCCGGAGTTTGCAATGGAG
 
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rJMSF002D03+          GAGGAGGAGCATCAGCGCTTGTTGTAGAGCTCATGCCTGAAGCGAAGATGGTACGACCAA
JMFN014J17-           GAGGAGGAGCATCAGCGCTTGTTGTAGAGCTCATGCCTGAAGCGAAGATGGTACGACCAA
                      ____________________________________________________________
consensus             GAGGAGGAGCATCAGCGCTTGTTGTAGAGCTCATGCCTGAAGCGAAGATGGTACGACCAA
 
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rJMSF002D03+          AGCTGTAAAATCTGGCACTCTGGTTGTTGCTGCGATCATTTGCTCGAGATACATGTTTAT
JMFN014J17-           AGCTGTAAAATCTGGCACTCTGGTTGTTGCTGCGATCATTTGCTCGAGATACATGTTTAT
                      ____________________________________________________________
consensus             AGCTGTAAAATCTGGCACTCTGGTTGTTGCTGCGATCATTTGCTCGAGATACATGTTTAT
 
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rJMSF002D03+          GATACGTTTCTTGGTAGAACTTACAGAAGACGGGGAAATAATGTAGCTTGAAGGGTTCAA
JMFN014J17-           GATACGTTTCTTGGTAGAACTTACAGAAGACGGGGAAATAATGTAGCTTGAAGGGTTCAA
                      ____________________________________________________________
consensus             GATACGTTTCTTGGTAGAACTTACAGAAGACGGGGAAATAATGTAGCTTGAAGGGTTCAA
 
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rJMSF002D03+          ACAAGGAAGGATTCAGCTGTTAGGATTGTTGTTATTATTTAGCTTTTGTTAGCGTTGCTG
JMFN014J17-           ACAAGGAAGGATTCAGCTGTTAGGATTGTTGTTATTATTTAGCTTTTGTTAGCGTTGCTG
                      ____________________________________________________________
consensus             ACAAGGAAGGATTCAGCTGTTAGGATTGTTGTTATTATTTAGCTTTTGTTAGCGTTGCTG
 
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rJMSF002D03+          AATTCTGTATT                                                 
JMFN014J17-           AATTCTGTATTTAAATAGCAATTGTTGCAAATAAAGAGAATAAATAGGCTTGATATTGGC
                      ____________________________________________________________
consensus             AATTCTGTATTTAAATAGCAATTGTTGCAAATAAAGAGAATAAATAGGCTTGATATTGGC
 
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JMFN014J17-           AATTAGAAGATTTGGGAGAAGGGGAAACTCATAAAAATTCCTCATGTGCTTTTTTTGTTT
                      ____________________________________________________________
consensus             AATTAGAAGATTTGGGAGAAGGGGAAACTCATAAAAATTCCTCATGTGCTTTTTTTGTTT