| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN005D09 | Sequence | 632 | 003319 (7) | ref|XP_009799027.1| | 4e-88 | PREDICTED: V-type proton ATPase subunit c''1 [Nicotiana sylvestris] | |||||
| JMFN005J19 | Sequence | 627 | 003319 (7) | ref|XP_009799027.1| | 3e-88 | PREDICTED: V-type proton ATPase subunit c''1 [Nicotiana sylvestris] | |||||
| JMFN007P19 | Sequence | 549 | 003319 (7) | ref|XP_009799027.1| | 1e-88 | PREDICTED: V-type proton ATPase subunit c''1 [Nicotiana sylvestris] | |||||
| JMFN010O01 | Sequence | 627 | 003319 (7) | ref|XP_009799027.1| | 4e-88 | PREDICTED: V-type proton ATPase subunit c''1 [Nicotiana sylvestris] | |||||
| JMFN028B19 | Sequence | 586 | 003319 (7) | gb|KDP33638.1| | 4e-84 | hypothetical protein JCGZ_07209 [Jatropha curcas] | |||||
| JMFN029E14 | Sequence | 485 | 003319 (7) | ref|XP_008394041.1| | 2e-59 | PREDICTED: V-type proton ATPase subunit c''-like [Malus domestica] | |||||
| JMSF045L11 | Sequence | 695 | 003319 (7) | ref|XP_009616142.1| | 2e-92 | PREDICTED: V-type proton ATPase subunit c''1 [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
rJMSF045L11- ATAAAGCTTTTTCA
____________________________________________________________
consensus ATAAAGCTTTTTCA
. : . : . : . : . : . :
rJMSF045L11- GTTAGCCAAAAATAGCACAATAGCTTATTATTGTAAACTTCAAATAACACAGATTATTGA
____________________________________________________________
consensus GTTAGCCAAAAATAGCACAATAGCTTATTATTGTAAACTTCAAATAACACAGATTATTGA
. : . : . : . : . : . :
rJMSF045L11- TTCCGAAATACGTGCGCAGATGCAAATAATATAGAACACACAAGAAGAGAGATGGGAGTA
JMFN005J19+ CAGATGCAAATAATATAGAACACCCAAGAAGAGAGATGGGAGTA
JMFN005D09+ GAAGAGAGATGGGAGTA
____________________________________________________________
consensus TTCCGAAATACGTGCGCAGATGCAAATAATATAGAACACCCAAGAAGAGAGATGGGAGTA
. : . : . : . : . : . :
rJMSF045L11- AAAGACTGTTATTACACTGCACAAAATACCCTACATAACTCACTAAGCCTTGGATGGCCA
JMFN007P19+ ATAACTCAATAAGCCTTGGATGGCCA
JMFN005J19+ AAAGACTGTTATTACACTGCACAAAATACCCTACATAACTCACTAAGCCTTGGATGGCCA
JMFN005D09+ AAAGACTGTTATTACACTGCACAAAATACCCTACATAACTCACTAAGCCTTGGATGGCCA
JMFN010O01+ CATAACTCACTAAGCCTTGGATGGCCA
____________________________________________________________
consensus AAAGACTGTTATTACACTGCACAAAATACCCTACATAACTCACTAAGCCTTGGATGGCCA
. : . : . : . : . : . :
rJMSF045L11- AGATGCTTGAGCTGACATGATTATTCCCACAATGACACCAAACAGCCCCAGTGCGCTACC
JMFN007P19+ AGATGCTTGAGCTGACATGATTATTCCCACAATGACACCAAACAGCCCCAGTGCGCTACC
JMFN029E14+ GACAGGATTATTCCCACAATGACGCCAGACAGCCCCAGGGCGGTACC
JMFN005J19+ AGATGCTTGAGCTGACATGATTATTCCCACAATGACACCAAACAGCCCCAGTGCGCTACC
JMFN005D09+ AGATGCTTGAGCTGACATGATTATTCCCACAATGACACCAAACAGCCCCAGTGCGCTACC
JMFN028B19+ ATGCTTGAGCTGACATGATTATTCCCACAATGACACCAAACAGCCCCAGTGCGCTACC
JMFN010O01+ AGATGCTTGAGCTGACATGATTATTCCCACAATGACACCAAACAGCCCCAGTGCGCTACC
____________________________________________________________
consensus AGATGCTTGAGCTGACATGATTATTCCCACAATGACACCAAACAGCCCCAGTGCGCTACC
. : . : . : . : . : . :
rJMSF045L11- AAAAATCTCAATCACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
JMFN007P19+ AAAAATCTCAATCACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
JMFN029E14+ AAAAGTGTCAATCACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
JMFN005J19+ AAAAATCTCAATCACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
JMFN005D09+ AAAAATCTCAATCACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
JMFN028B19+ AAAAATCTCAATTACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
JMFN010O01+ AAAAATCTCAATCACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
____________________________________________________________
consensus AAAAATCTCAATCACCAGAATTTTGACAAAAAGTGTGGAGTTTTGTGCATCAGATAAAGC
. : . : . : . : . : . :
rJMSF045L11- ACAGCTGCTACCGATCACTCCAACGCNCAGCCCGCATACNAGATTGGCAAAGCCAACAAT
JMFN007P19+ ACAGCTGCTACCGATCACTCCAACGCACAGCCCGCATACAAGATTGGCAAAGCCAACAAT
JMFN029E14+ ACAGCTGCTACCGATCACTCCAGCGCACAGCCCGCATACAAGATTGGCAAAGCCAGCAAT
JMFN005J19+ ACAGCTGCTACCGATCACTCCAACGCACAGCCCGCATACAAGATTGGCAAAGCCAACAAT
JMFN005D09+ ACAGCTGCTACCGATCACTCCAACGCACAGCCCGCATACAAGATTGGCAAAGCCAACAAT
JMFN028B19+ ACAGCTGCTACCGATCACTCCAACGCACAGCCCGCATACAAGATTGGCAAAGCCAACAAT
JMFN010O01+ ACAGCTGCTACCGATCACTCCAACGCACAGCCCGCATACAAGATTGGCAAAGCCAACAAT
____________________________________________________________
consensus ACAGCTGCTACCGATCACTCCAACGCACAGCCCGCATACAAGATTGGCAAAGCCAACAAT
. : . : . : . : . : . :
rJMSF045L11- TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
JMFN007P19+ TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
JMFN029E14+ TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
JMFN005J19+ TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
JMFN005D09+ TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
JMFN028B19+ TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
JMFN010O01+ TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
____________________________________________________________
consensus TATCCCTGAGGCAAAAATTGCATAGCCAGCTGTGAGGGACTCGTGTGCATGCATCTGGGA
. : . : . : . : . : . :
rJMSF045L11- GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCACANTGACACCATATATCGC
JMFN007P19+ GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCACAATGACACCATATATCGC
JMFN029E14+ GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCGCAATGGCACCATATATCGC
JMFN005J19+ GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCACAATGACACCATATATCGC
JMFN005D09+ GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCACAATGACACCATATATCGC
JMFN028B19+ GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCACAATGACACCATATATCGC
JMFN010O01+ GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCACAATGACACCATATATCGC
____________________________________________________________
consensus GGAAGGAACAGTCTCAAGCTTCGTTTGGAGAATGATAGCCACAATGACACCATATATCGC
. : . : . : . : . : . :
rJMSF045L11- AACTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
JMFN007P19+ AACTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
JMFN029E14+ AGCTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
JMFN005J19+ AACTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
JMFN005D09+ AACTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
JMFN028B19+ AACTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
JMFN010O01+ AACTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
____________________________________________________________
consensus AACTGCCTCGCAAAAAATTACACTGATGAGATTTTTGGAGGTAATGCGAGGGGCTTTGAT
. : . : . : . : . : . :
rJMSF045L11- CGCAGCGCCAATCAAACTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAACTGA
JMFN007P19+ CGCAGCGCCAATCAAACTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAACTGA
JMFN029E14+ CGCAGCGCCAATCAAAGTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAGCGGA
JMFN005J19+ CGCAGCGCCAATCAAACTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAACTGA
JMFN005D09+ CGCAGCGCCAATCAAACTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAACTGA
JMFN028B19+ CGCAGCGCCAATCAAACTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAACTGA
JMFN010O01+ CGCAGCGCCAATCAAACTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAACTGA
____________________________________________________________
consensus CGCAGCGCCAATCAAACTACTTCCTGTTATATAGATCCCCCAGGCAGCACCGAGAACTGA
. : . : . : . : . : . :
rJMSF045L11- AACGCCNATNGAGATGGCNATTCCGATGGCGGAGAAGGTGTAGGGAGAGATCTGCGTCAG
JMFN007P19+ AACGCCGATTGAGATGGCAATTCCGATGGCGGAGAAGGTGTAGGGAGAGATCTGCGTCAG
JMFN029E14+ AACGCCGATTGAGATGGCAATTCCGATGGCGGAGAAGGTGTAGGGAGAGATTTGCGTCAG
JMFN005J19+ AACGCCGATTGAGATGGCAATTCCGATGGCGGAGAAGGTGTAGGGAGAGATCTGCGTCAG
JMFN005D09+ AACGCCGATTGAGATGGCAATTCCGATGGCGGAGAAGGTGTAGGGAGAGATCTGCGTCAG
JMFN028B19+ AACGCCGATTGAGATGGCAATTCCGATGGCGGAGAAGGTGTAGGGAGAGATCTGCGTCAG
JMFN010O01+ AACGCCGATTGAGATGGCAATTCCGATGGCGGAGAAGGTGTAGGGAGAGATCTGCGTCAG
____________________________________________________________
consensus AACGCCGATTGAGATGGCAATTCCGATGGCGGAGAAGGTGTAGGGAGAGATCTGCGTCAG
. : . : . : . : . : . :
rJMSF045L11- CGCTCGCGACCATGAGCTTGA
JMFN007P19+ CGCTCGCGACCATGAGCTTGAATCGCCACCCATCGT
JMFN029E14+ CGCTCGCGACCATGAGCT
JMFN005J19+ CGCTCGCGACCATGAGCTTGAATCGCCACCCATCGTGAGATCG
JMFN005D09+ CGCTCGCGACCATGAGCTTGAATCGCCACCCATCGTGAGATCGGAAGTTCGCCAAGTATG
JMFN028B19+ CGCTCGCGACCATGAGCTTGAATCGCCACCCATCGTGAGATCGGAAGTTCGCCAAGTATG
JMFN010O01+ CGCTCGCGACCATGAGCTTGAATCGCCACCCATCGTGAGATCGGAAGTTCGCCAAGTATG
____________________________________________________________
consensus CGCTCGCGACCATGAGCTTGAATCGCCACCCATCGTGAGATCGGAAGTTCGCCAAGTATG
. : . : . : . : . : . :
JMFN005D09+ GATTCAGATTTCAGA
JMFN028B19+ GATTCAGATTTCAGAGATCGGTAGATAGGGG
JMFN010O01+ GATTCAGATTTCAGAGATCGGTAGATAGGGGAATGGGGAAGGATGAAGATGGAGAGAGAA
____________________________________________________________
consensus GATTCAGATTTCAGAGATCGGTAGATAGGGGAATGGGGAAGGATGAAGATGGAGAGAGAA