Contig 003318:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN010G07Sequence642003318 (2)ref|XP_007038436.1|2e-72Ribosomal protein S10p/S20e family protein isoform 1 [Theobroma cacao] ref|XP_0
JMFN034K06Sequence638003318 (2)gb|KDP22396.1|2e-74hypothetical protein JCGZ_26227 [Jatropha curcas]

Alignment

This contig is upended


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JMFN034K06+                                 TGAAATTGACAAAATGTTTCTAGTTCCTAACATTGAAA
JMFN010G07+                             GCATTGAAATTGACAAAATTGTTCTAGTTCCTAACATTGAAA
                      ____________________________________________________________
consensus                               GCATTGAAATTGACAAAATTTTTCTAGTTCCTAACATTGAAA
 
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JMFN034K06+           GTCTTTGCTGAAATTTAAAAAATGTAACTCCAAAACCGAATGATGCTATAAACTGGCTAC
JMFN010G07+           GTCTNTGCTGAAATTTAAAAAATGTAACTCCAAAACCGAATGATGCTATAAACTGGCTAC
                      ____________________________________________________________
consensus             GTCTTTGCTGAAATTTAAAAAATGTAACTCCAAAACCGAATGATGCTATAAACTGGCTAC
 
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JMFN034K06+           AACCTTCACACCCGTGAGGAGTACGGGATGGAAATTCCAAATTACCATTATCACCAGGGA
JMFN010G07+           AACCTTCACACCCGTGAGGAGTACGGGATGGAAATTCCAAATTACCATTATCACCAGGGA
                      ____________________________________________________________
consensus             AACCTTCACACCCGTGAGGAGTACGGGATGGAAATTCCAAATTACCATTATCACCAGGGA
 
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JMFN034K06+           GGCACACAAACTAAGAGTCGGCAATGGTGACTTCAACCTCGACCCCAGGTTCAATAGTAA
JMFN010G07+           GGCACACAAACTAAGAGTCGGCAATGGTGACTTCAACCTCGACCCCAGGTTCAATAGTAA
                      ____________________________________________________________
consensus             GGCACACAAACTAAGAGTCGGCAATGGTGACTTCAACCTCGACCCCAGGTTCAATAGTAA
 
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JMFN034K06+           TTGACGTAATCTGTTTGACTACTTCTGGGGAGCTGAAGAGGTCAATAACCCTCTTGTGAA
JMFN010G07+           TTGACGTAATCTGTTTGACTACTTCTGGGGAGCTGAAGAGGTCAATAACCCTCTTGTGAA
                      ____________________________________________________________
consensus             TTGACGTAATCTGTTTGACTACTTCTGGGGAGCTGAAGAGGTCAATAACCCTCTTGTGAA
 
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JMFN034K06+           CACGAAGTTCAAACCTGTCCCAAGTGTTAGTACCTTCTCCACAGGGAGACTTCCTAGTGG
JMFN010G07+           CACGAAGTTCAAACCTGTCTCAAGTGTTAGTACCTTCTCCACAGGGAGACTTCCTAGTGG
                      ____________________________________________________________
consensus             CACGAAGTTCAAACCTGTCTCAAGTGTTAGTACCTTCTCCACAGGGAGACTTCCTAGTGG
 
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JMFN034K06+           TAATGTGAAGAACTTTGGTGGGCATCCTCACTGGTCCCTTGACCCTAAGTCTTTTGTCCT
JMFN010G07+           TAATGTGAAGAACTTTGGTGGGCATCCTCACTGGTCCCTTGACCCTAAGTCTTTTGTCCT
                      ____________________________________________________________
consensus             TAATGTGAAGAACTTTGGTGGGCATCCTCACTGGTCCCTTGACCCTAAGTCTTTTGTCCT
 
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JMFN034K06+           TAGCACCTCGAACCAAATCACCGCAAAATTATGGTGAGAGTGAGAGAAAGAGACCCTTTT
JMFN010G07+           TAGCACCTCGAACCAAATCACCGCAAAATTATGGTGAGAGTGAGAGAAAGAGACCCTTTT
                      ____________________________________________________________
consensus             TAGCACCTCGAACCAAATCACCGCAAAATTATGGTGAGAGTGAGAGAAAGAGACCCTTTT
 
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JMFN034K06+           CGAGGTTCTTTACGTTCTTGGAGGAGAGAGTGATTCTGATCTTATGAATCTGCTCCTGGG
JMFN010G07+           CGAGGTTCTTTACGTTCTTGGAGGAGAGAGTGATTCTGATCTTATGAATCTGCTCCTGGG
                      ____________________________________________________________
consensus             CGAGGTTCTTTACGTTCTTGGAGGAGAGAGTGATTCTGATCTTATGAATCTGCTCCTGGG
 
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JMFN034K06+           GCTCCTCCAACCCTGCTTTCGTCGGCTTCATTGCTTGGTATGCCATTCTTTTGCTCGGAT
JMFN010G07+           GCTCCTCCAACCCTGCTTTCGTCGGCTTCATTGCTTGGTATGCCATTCTTTTGCTCGGAT
                      ____________________________________________________________
consensus             GCTCCTCCAACCCTGCTTTCGTCGGCTTCATTGCTTGGTATGCCATTCTTTTGCTCGGAT
 
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JMFN034K06+           ATAAGTTGAGACGGACGGACGGAGGAAGCTGCAGTGGAAGTGAGCTGGATACCGTCGGGA
JMFN010G07+           ATAAGTTGAGACGGACGGACGGAGGAAGCTGCAGTGGAAGTGAGCTGGATACCGTCGGGA
                      ____________________________________________________________
consensus             ATAAGTTGAGACGGACGGACGGAGGAAGCTGCAGTGGAAGTGAGCTGGATACCGTCGGGA