Contig 003312:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS097C12+                                                         AGACATTGTACGAC
                      ____________________________________________________________
consensus                                                           AGACATTGTACGAC
 
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JMFS097C12+           CAAAATCATCAGTTCTCGAACTGCAGAACTAAGATGGTTGTTGAGAAACAACTCTGAGTG
JMFN007N12+                                            ATGGTTGTTGAGAAACAACTCTGAGTG
                      ____________________________________________________________
consensus             CAAAATCATCAGTTCTCGAACTGCAGAACTAAGATGGTTGTTGAGAAACAACTCTGAGTG
 
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JMFS097C12+           TCCCGCCAAGCTCCACAGGAACGAGGGGTATAAGCGAATGCAAGACGTCTGTTATTAATG
JMFN007N12+           TCCCGCCAAGCTCCACAGGAACGAGGGGTATAAGCGAATGCAAGACGTCTGTTATTAATG
                      ____________________________________________________________
consensus             TCCCGCCAAGCTCCACAGGAACGAGGGGTATAAGCGAATGCAAGACGTCTGTTATTAATG
 
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JMFS097C12+           GACGATAGCTTGGCTCTGGTTGAACGCAGAGCACAGCAACTGCAGCCACCTGGAATAGGT
JMFN007N12+           GACGATAGCTTGGCTCTGGTTGAACGCAGAGCACAGCAACTGCAGCCACCTGGAATAGGT
                      ____________________________________________________________
consensus             GACGATAGCTTGGCTCTGGTTGAACGCAGAGCACAGCAACTGCAGCCACCTGGAATAGGT
 
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JMFS097C12+           GCTTGATATCCATCGTATCTTTGATCACAGGATCGACAATGTTGGGAAGCTTCGATCTGT
JMFN007N12+           GCTTGATATCCATCGTATCTTTGATCACAGGATCGACAATGTTGGGAAGCTTCGATCTGT
                      ____________________________________________________________
consensus             GCTTGATATCCATCGTATCTTTGATCACAGGATCGACAATGTTGGGAAGCTTCGATCTGT
 
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JMFS097C12+           CTGTGAGCTGAGGCATCGCCCATGTGACAATAGACTGGCATTGAGCTGGTGCCAATTTCT
JMFN007N12+           CTGTGAGCTGAGGCATCGCCCATGTGACAATAGACTGGCATTGAGCTGGTGCCAATTTCT
                      ____________________________________________________________
consensus             CTGTGAGCTGAGGCATCGCCCATGTGACAATAGACTGGCATTGAGCTGGTGCCAATTTCT
 
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JMFS097C12+           CCACCGGCCTTTTTCCTAGTAGAAGCTCCAAAAGTACAACTCCGAACCCATAAACATCAC
JMFN007N12+           CCACCGGCCTTTTTCCTAGTAGAAGCTCCAAAAGTACAACTCCGAACCCATAAACATCAC
                      ____________________________________________________________
consensus             CCACCGGCCTTTTTCCTAGTAGAAGCTCCAAAAGTACAACTCCGAACCCATAAACATCAC
 
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JMFS097C12+           TTTTATCCGTTAGTATTCCATCTAATAGGTATTCTGGAGCTACATAGCCAACGGTTCCCG
JMFN007N12+           TTTTATCCGTTAGTATTCCATCTAATAGGTATTCTGGAGCTACATAGCCAACGGTTCCCG
                      ____________________________________________________________
consensus             TTTTATCCGTTAGTATTCCATCTAATAGGTATTCTGGAGCTACATAGCCAACGGTTCCCG
 
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JMFS097C12+           AGAGCTTAATGTTATTTTTGCTTTGAGCCCCATCCCGCACAGCAAGACCAAAATCTGAGA
JMFN007N12+           AGAGCTTAATGTTATTTTTGCTTTGAGCCCCATCCCGCACAGCAAGACCAAAATCTGAGA
                      ____________________________________________________________
consensus             AGAGCTTAATGTTATTTTTGCTTTGAGCCCCATCCCGCACAGCAAGACCAAAATCTGAGA
 
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JMFS097C12+           TCTTGGCATTGAAGTTGGCATCTAGAAGAATATTGGAGGATTTCAGATCTCTATGGATAA
JMFN007N12+           TCTTGGCATTGAAGTTGGCATCTAGAAGAATATTGGAGGATTTCAGATCTCTATGGATAA
                      ____________________________________________________________
consensus             TCTTGGCATTGAAGTTGGCATCTAGAAGAATATTGGAGGATTTCAGATCTCTATGGATAA
 
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JMFS097C12+           CTGGTGGTTTGCAATGTTCATGTAAATATTC                             
JMFN007N12+           CTGGTGGTTTGCAATGTTCATGTAAATATTCTAATCCCCTTGCTGTATCAAGTGCAATCT
                      ____________________________________________________________
consensus             CTGGTGGTTTGCAATGTTCATGTAAATATTCTAATCCCCTTGCTGTATCAAGTGCAATCT
 
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JMFN007N12+           TCAATCTATTATGCCACGCTAATGCTGATCCATGGGAAGGTCCATGTAGTTGATATTCCA
                      ____________________________________________________________
consensus             TCAATCTATTATGCCACGCTAATGCTGATCCATGGGAAGGTCCATGTAGTTGATATTCCA