Contig 003309:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006N05Sequence631003309 (2)ref|XP_009622688.1|2e-30PREDICTED: bromodomain-containing protein 9-like [Nicotiana tomentosiformis]
JMSF003E09Sequence430003309 (2)677015999ref|XP_009626246.1|2e-15PREDICTED: bromodomain-containing protein 9-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN006N05+ ATCAGGTAACTCATTCGGATCCACAGGCTCA
                      ____________________________________________________________
consensus ATCAGGTAACTCATTCGGATCCACAGGCTCA
 
. : . : . : . : . : . :
JMFN006N05+ GCAAACACTCCATATGTATCCTTCTTNTGAAGTCTGTCCAGAATGAAAACCAACAACTTT
                      ____________________________________________________________
consensus GCAAACACTCCATATGTATCCTTCTTNTGAAGTCTGTCCAGAATGAAAACCAACAACTTT
 
. : . : . : . : . : . :
JMFN006N05+ TTGTCTGGCAAAGGTGCTGTGGGGCCGAACACCAATGGCGACCCTTGAGTATCGGTCCCT
                      ____________________________________________________________
consensus TTGTCTGGCAAAGGTGCTGTGGGGCCGAACACCAATGGCGACCCTTGAGTATCGGTCCCT
 
. : . : . : . : . : . :
JMSF003E09+ TCCTGATCCAGAACGACGTCGGTGGATCTGCGATTGACGGCGTTG
JMFN006N05+ TTCTGACCCTTTTCTTCCTGATCCAGAACGACGTCGGTGGATCTGCGATTGACGGCGTTG
                      ____________________________________________________________
consensus TTCTGACCCTTTTCTTCCTGATCCAGAACGACGTCGGTGGATCTGCGATTGACGGCGTTG
 
. : . : . : . : . : . :
JMSF003E09+ ATCTTGCGCTTCTTAACGGAAGCCTCACGGTTGTCGCCGTCCGGGTCGGACTCGGAAGCC
JMFN006N05+ ATCTTGCGCTTCTTAACGGAAGCCTCACGGTTGTCGCCGTCCGGGTCGGACTCGGAAGCC
                      ____________________________________________________________
consensus ATCTTGCGCTTCTTAACGGAAGCCTCACGGTTGTCGCCGTCCGGGTCGGACTCGGAAGCC
 
. : . : . : . : . : . :
JMSF003E09+ CAATTGCCGGAGGAGGAATTGGGTAAATGTTGGTGCTGATTGTTAGACTCTGGCAAGCGG
JMFN006N05+ CAATTGCCGGAGGAGGAATTGGGTAAATGTTGGTGCTGATTGTTAGACTCTGGCAAGCGG
                      ____________________________________________________________
consensus CAATTGCCGGAGGAGGAATTGGGTAAATGTTGGTGCTGATTGTTAGACTCTGGCAAGCGG
 
. : . : . : . : . : . :
JMSF003E09+ ACGACGAGCTTGACTTTCTTTTCCTTCCTCTCGTCGTCGTCGTCGTCTCCGACGAATTCG
JMFN006N05+ ACGACGAGCTTGACTTTCTTTTCCTTCCTCTCGTCGTCGTCGTCGTCTCCGACGAATTCG
                      ____________________________________________________________
consensus ACGACGAGCTTGACTTTCTTTTCCTTCCTCTCGTCGTCGTCGTCGTCTCCGACGAATTCG
 
. : . : . : . : . : . :
JMSF003E09+ GGCGGCGGAGATTCGGAATTCGAATTAGGGTTCCGGCGGGTGGAAGTGGAAGCAAATTTA
JMFN006N05+ GGCGGCGGAGATTCGGAATTCGAATTAGGGTTCCGGCGGGTGGAAGTGGAAGCAAATTTA
                      ____________________________________________________________
consensus GGCGGCGGAGATTCGGAATTCGAATTAGGGTTCCGGCGGGTGGAAGTGGAAGCAAATTTA
 
. : . : . : . : . : . :
JMSF003E09+ TGATTCTCCCGGTGCCGGACATCGGACAGAGACGGTCGGCCTTTCTTCTTCTTGCTCCTC
JMFN006N05+ TGATTCTCCCGGTGCCGGACATCGGACAGAGACGGTCGGCCTTTCTTCTTCTTGCTCCTC
                      ____________________________________________________________
consensus TGATTCTCCCGGTGCCGGACATCGGACAGAGACGGTCGGCCTTTCTTCTTCTTGCTCCTC
 
. : . : . : . : . : . :
JMSF003E09+ AGGTTTTCGGCCTTACCCATTTTTTTCTTTCCTTTCGGACCAAAATTTTCTCTCTCTACT
JMFN006N05+ AGGTTTTCGGCCTTACCCATTTTTTTCTTTCCTTTCGGACCAAAATTTTCTCTCTCTACT
                      ____________________________________________________________
consensus AGGTTTTCGGCCTTACCCATTTTTTTCTTTCCTTTCGGACCAAAATTTTCTCTCTCTACT
 
. : . : . : . : . : . :
JMSF003E09+ GTTTATCTCTAAACCTCCGTTCTC
JMFN006N05+ GTTTATCTCTAAACCTCCGTTCTCTCTCTATCTCCCTCTCTCTCAACACCTTTCATTTTC
                      ____________________________________________________________
consensus GTTTATCTCTAAACCTCCGTTCTCTCTCTATCTCCCTCTCTCTCAACACCTTTCATTTTC