Contig 003309:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006N05Sequence631003309 (2)ref|XP_009622688.1|2e-30PREDICTED: bromodomain-containing protein 9-like [Nicotiana tomentosiformis]
JMSF003E09Sequence430003309 (2)677015999ref|XP_009626246.1|2e-15PREDICTED: bromodomain-containing protein 9-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006N05+                                        ATCAGGTAACTCATTCGGATCCACAGGCTCA
                      ____________________________________________________________
consensus                                          ATCAGGTAACTCATTCGGATCCACAGGCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006N05+           GCAAACACTCCATATGTATCCTTCTTNTGAAGTCTGTCCAGAATGAAAACCAACAACTTT
                      ____________________________________________________________
consensus             GCAAACACTCCATATGTATCCTTCTTNTGAAGTCTGTCCAGAATGAAAACCAACAACTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006N05+           TTGTCTGGCAAAGGTGCTGTGGGGCCGAACACCAATGGCGACCCTTGAGTATCGGTCCCT
                      ____________________________________________________________
consensus             TTGTCTGGCAAAGGTGCTGTGGGGCCGAACACCAATGGCGACCCTTGAGTATCGGTCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+                          TCCTGATCCAGAACGACGTCGGTGGATCTGCGATTGACGGCGTTG
JMFN006N05+           TTCTGACCCTTTTCTTCCTGATCCAGAACGACGTCGGTGGATCTGCGATTGACGGCGTTG
                      ____________________________________________________________
consensus             TTCTGACCCTTTTCTTCCTGATCCAGAACGACGTCGGTGGATCTGCGATTGACGGCGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+           ATCTTGCGCTTCTTAACGGAAGCCTCACGGTTGTCGCCGTCCGGGTCGGACTCGGAAGCC
JMFN006N05+           ATCTTGCGCTTCTTAACGGAAGCCTCACGGTTGTCGCCGTCCGGGTCGGACTCGGAAGCC
                      ____________________________________________________________
consensus             ATCTTGCGCTTCTTAACGGAAGCCTCACGGTTGTCGCCGTCCGGGTCGGACTCGGAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+           CAATTGCCGGAGGAGGAATTGGGTAAATGTTGGTGCTGATTGTTAGACTCTGGCAAGCGG
JMFN006N05+           CAATTGCCGGAGGAGGAATTGGGTAAATGTTGGTGCTGATTGTTAGACTCTGGCAAGCGG
                      ____________________________________________________________
consensus             CAATTGCCGGAGGAGGAATTGGGTAAATGTTGGTGCTGATTGTTAGACTCTGGCAAGCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+           ACGACGAGCTTGACTTTCTTTTCCTTCCTCTCGTCGTCGTCGTCGTCTCCGACGAATTCG
JMFN006N05+           ACGACGAGCTTGACTTTCTTTTCCTTCCTCTCGTCGTCGTCGTCGTCTCCGACGAATTCG
                      ____________________________________________________________
consensus             ACGACGAGCTTGACTTTCTTTTCCTTCCTCTCGTCGTCGTCGTCGTCTCCGACGAATTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+           GGCGGCGGAGATTCGGAATTCGAATTAGGGTTCCGGCGGGTGGAAGTGGAAGCAAATTTA
JMFN006N05+           GGCGGCGGAGATTCGGAATTCGAATTAGGGTTCCGGCGGGTGGAAGTGGAAGCAAATTTA
                      ____________________________________________________________
consensus             GGCGGCGGAGATTCGGAATTCGAATTAGGGTTCCGGCGGGTGGAAGTGGAAGCAAATTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+           TGATTCTCCCGGTGCCGGACATCGGACAGAGACGGTCGGCCTTTCTTCTTCTTGCTCCTC
JMFN006N05+           TGATTCTCCCGGTGCCGGACATCGGACAGAGACGGTCGGCCTTTCTTCTTCTTGCTCCTC
                      ____________________________________________________________
consensus             TGATTCTCCCGGTGCCGGACATCGGACAGAGACGGTCGGCCTTTCTTCTTCTTGCTCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+           AGGTTTTCGGCCTTACCCATTTTTTTCTTTCCTTTCGGACCAAAATTTTCTCTCTCTACT
JMFN006N05+           AGGTTTTCGGCCTTACCCATTTTTTTCTTTCCTTTCGGACCAAAATTTTCTCTCTCTACT
                      ____________________________________________________________
consensus             AGGTTTTCGGCCTTACCCATTTTTTTCTTTCCTTTCGGACCAAAATTTTCTCTCTCTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003E09+           GTTTATCTCTAAACCTCCGTTCTC                                    
JMFN006N05+           GTTTATCTCTAAACCTCCGTTCTCTCTCTATCTCCCTCTCTCTCAACACCTTTCATTTTC
                      ____________________________________________________________
consensus             GTTTATCTCTAAACCTCCGTTCTCTCTCTATCTCCCTCTCTCTCAACACCTTTCATTTTC