Contig 003308:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004D07Sequence618003308 (4)emb|CDP03039.1|4e-24unnamed protein product [Coffea canephora]
JMFN006A13Sequence642003308 (4)emb|CDP03039.1|7e-24unnamed protein product [Coffea canephora]
JMFN006A15Sequence638003308 (4)emb|CDP03039.1|8e-24unnamed protein product [Coffea canephora]
JMFN030F18Sequence595003308 (4)ref|XP_002275644.1|95.5PREDICTED: uncharacterized protein LOC100266455 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN004D07+ GCCGGCGCCGCCCCCACGGCGTTGATCTCTCTCATGAATCTCCAT
JMFN006A13+ CCGCCCCCACGGCGTTGATCTCTCTCATGAATCTCCAT
JMFN030F18+ CCAT
JMFN006A15+ CCGCCCCCACGGCGTTGATCTCTCTCATGAATCTCCAT
                      ____________________________________________________________
consensus GCCGGCGCCGCCCCCACGGCGTTGATCTCTCTCATGAATCTCCAT
 
. : . : . : . : . : . :
JMFN004D07+ GCATTTCAGCAAATATTTAAAGGTCTCGATTTCGCACGGGATTATGAGCCCCCCGCGGTG
JMFN006A13+ GCATTTCAGCAAATATTTAAAGGTCTCGATTTCGCACGGGATTATGAGCCCCCCGCGGTG
JMFN030F18+ GCATTTCAGCAAATATTTAAAGGTCTGGATTTCGCACGGGATTATGAGCCCCCCGCGGTG
JMFN006A15+ GCATTTCAGCAAATATTTAAAGGTCTCGATTTCGCACGGGATTATGAGCCCCCCGCGGTG
                      ____________________________________________________________
consensus GCATTTCAGCAAATATTTAAAGGTCTCGATTTCGCACGGGATTATGAGCCCCCCGCGGTG
 
. : . : . : . : . : . :
JMFN004D07+ CTCAAACCCGAACTCCTCTTCCACTTTTTCCAGCAACACCTTGAACAGCGGATCGCTTAG
JMFN006A13+ CTCAAACCCGAACTCCTCTTCCACTTTTTCCAGCAACACCTTGAACAGCGGATCGCTTAG
JMFN030F18+ CTCAAACCCGAACTCCTCTTCCACTTTTTCCAGCAACACCTTGAACAGCGGATCGCTTAG
JMFN006A15+ CTCAAACCCGAACTCCTCTTCCACTTTTTCCAGCAACACCTTGAACAGCGGATCGCTTAG
                      ____________________________________________________________
consensus CTCAAACCCGAACTCCTCTTCCACTTTTTCCAGCAACACCTTGAACAGCGGATCGCTTAG
 
. : . : . : . : . : . :
JMFN004D07+ ATAGGTGGTCGGAATTATGAACCGCCGCAGCACCTCCCCCCGCCCCACGTATACCCCCAT
JMFN006A13+ ATAGGTGGTCGGAATTATGAACCGCCGCAGCACCTCCCCCCGCCCCACGTATACCCCCAT
JMFN030F18+ ATAGGTGGTCGGAATTATGAACCGCCGCAGCACCTCCCCCCGCCCCACGTATACCCCCAT
JMFN006A15+ ATAGGTGGTCGGAATTATGAACCGCCGCAGCACCTCCCCCCGCCCCACGTATACCCCCAT
                      ____________________________________________________________
consensus ATAGGTGGTCGGAATTATGAACCGCCGCAGCACCTCCCCCCGCCCCACGTATACCCCCAT
 
. : . : . : . : . : . :
JMFN004D07+ GTACCCCTTCGGCACGTCCGCCGGCGCCTGCCTCACGCAATCGGCGCTCTTTACCGCCGG
JMFN006A13+ GTACCCCTTCGGCACGTCCGCCGGCGCCTGCCTCACGCAATCGGCGCTCTTTACCGCCGG
JMFN030F18+ GTACCCCTTCGGCACGTCCGCCGGCGCCTGCCTCACGCAATCGGCGCTCTTTACCGCCGG
JMFN006A15+ GTACCCCTTCGGCACGTCCGCCGGCGCCTGCCTCACGCAATCGGCGCTCTTTACCGCCGG
                      ____________________________________________________________
consensus GTACCCCTTCGGCACGTCCGCCGGCGCCTGCCTCACGCAATCGGCGCTCTTTACCGCCGG
 
. : . : . : . : . : . :
JMFN004D07+ CGAAACGCTAGCCGTCGTCTCCACCGTCGTCGTAGTCCTCCTAACGGAATTGTTACGCGC
JMFN006A13+ CGAAACGCTAGCCGTCGTCTCCACCGTCGTCGTAGTCCTCCTAACGGAATTGTTACGCGC
JMFN030F18+ CGAAACGCTAGCCGTCGTCTCCACCGTCGTCGTAGTCCTCCTAACGGAATTGTTACGCGC
JMFN006A15+ CGAAACGCTAGCCGTCGTCTCCACCGTCGTCGTAGTCCTCCTAACGGAATTGTTACGCGC
                      ____________________________________________________________
consensus CGAAACGCTAGCCGTCGTCTCCACCGTCGTCGTAGTCCTCCTAACGGAATTGTTACGCGC
 
. : . : . : . : . : . :
JMFN004D07+ GATGCGTTTCCACTTTCGCACGAATCCCATCAGCCTTACGATGCGGCGGATCCCGCACAC
JMFN006A13+ GATGCGTTTCCACTTTCGCACGAATCCCATCAGCCTTACGATGCGGCGGATCCCGCACAC
JMFN030F18+ GATGCGTTTCCACTTTCGCACGAATCCCATCAGCCTTACGATGCGGCGGATCCCGCACAC
JMFN006A15+ GATGCGTTTCCACTTTCGCACGAATCCCATCAGCCTTACGATGCGGCGGATCCCGCACAC
                      ____________________________________________________________
consensus GATGCGTTTCCACTTTCGCACGAATCCCATCAGCCTTACGATGCGGCGGATCCCGCACAC
 
. : . : . : . : . : . :
JMFN004D07+ CTTCCTCTTTTCCCCGACTAATAATTCTGCCATTCTGATACCGGCGCGGCGGATAGACGG
JMFN006A13+ CTTCCTCTTTTCCCCGACTAATAATTCTGCCATTCTGATACCGGCGCGGCGGATAGACGG
JMFN030F18+ CTTCCTCTTTTCCCCGACTAATAATTCTGCCATTCTGATACCGGCGCGGCGGATAGACGG
JMFN006A15+ CTTCCTCTTTTCCCCGACTAATAATTCTGCCATTCTGATACCGGCGCGGCGGATAGACGG
                      ____________________________________________________________
consensus CTTCCTCTTTTCCCCGACTAATAATTCTGCCATTCTGATACCGGCGCGGCGGATAGACGG
 
. : . : . : . : . : . :
JMFN004D07+ CGGCGAAGGAGAAATCTGGCGGCGGCGGAGGCGGATAGACGGCGGCGAGGGATAGATCAG
JMFN006A13+ CGGCGAAGGAGAAATCTGGCGGCGGCGGAGGCGGATAGACGGCGGCGAGGGATAGATCAG
JMFN030F18+ CGGCGAAGGAGAAATCTGGCGGCGGCGGAGGCGGATAGACGGCGGCGAGGGATAGATCAG
JMFN006A15+ CGGCGAAGGAGAAATCTGGCGGCGGCGGAGGCGGATAGACGGCGGCGAGGGATAGATCAG
                      ____________________________________________________________
consensus CGGCGAAGGAGAAATCTGGCGGCGGCGGAGGCGGATAGACGGCGGCGAGGGATAGATCAG
 
. : . : . : . : . : . :
JMFN004D07+ GCGGCGGCGGATAGATAGACGGCTGAAATTAAGAATAGAAACATACACTAGGATAGCTGC
JMFN006A13+ GCGGCGGCGGATAGATAGACGGCTGAAATTAAGAATAGAAACATACACTAGGATAGCTGC
JMFN030F18+ GCGGCGGCGGATAGATAGACGGCTGAAATTAAGAATAGAAACATACACTAGGATAGCTGC
JMFN006A15+ GCGGCGGCGGATAGATAGACGGCTGAAATTAAGAATAGAAACATACACTAGGATAGCTGC
                      ____________________________________________________________
consensus GCGGCGGCGGATAGATAGACGGCTGAAATTAAGAATAGAAACATACACTAGGATAGCTGC
 
. : . : . : . : . : . :
JMFN004D07+ ATGGCGCTTCTTTATGAATGTAGATTGATATGA
JMFN006A13+ ATGGCGCTTCTTTATGAATGTAGATTGATATGATGATGTTAAGAAATAATCAGGATAAAA
JMFN030F18+ ATGGCGCTTCTTTATGAATGTAGATTGATATGATGATGTTAAGAAATAATC
JMFN006A15+ ATGGCGCTTCTTTATGAATGTAGATTGATATGATGATGTTAAGAAATAATCAGGATAAAA
                      ____________________________________________________________
consensus ATGGCGCTTCTTTATGAATGTAGATTGATATGATGATGTTAAGAAATAATCAGGATAAAA