Contig 003305:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN005B21+                                                          GAAAGGAACAACT
                      ____________________________________________________________
consensus                                                            GAAAGGAACAACT
 
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JMFN005B21+           TTGTTGAATTATCTTCTTGAATCTTTCAGAAAATGCCTCAACAATAACACCTGTGAGGTT
                      ____________________________________________________________
consensus             TTGTTGAATTATCTTCTTGAATCTTTCAGAAAATGCCTCAACAATAACACCTGTGAGGTT
 
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JMFN005B21+           TTCCGAGTTACTCCTATGGAGAACAAGTTTTGAAAAATGACTGCGCAGTATTTATTTTGA
                      ____________________________________________________________
consensus             TTCCGAGTTACTCCTATGGAGAACAAGTTTTGAAAAATGACTGCGCAGTATTTATTTTGA
 
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JMFN005B21+           CTAGGAATATCAAACTGAAAACACGGTTCACAGTACACTTTCCAGCTTCCAAAAAGAACA
JMFN017F20+                                                          TCCAAAAAGACNA
JMFN038L16+                                                          TCCAAAAAGAACA
                      ____________________________________________________________
consensus             CTAGGAATATCAAACTGAAAACACGGTTCACAGTACACTTTCCAGCTTCCAAAAAGAACA
 
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JMFN005B21+           CACAGCAAGTCTATAAAATAACGCCGCAAGCTCCCATTTTTGTCCAAAGGGAGAACACTT
JMFN017F20+           CACAGCAAGTCTATAAAATAACGCCGCAAGCTCCCATTTTTGTCCAAAGGGAGAACACTT
JMFN038L16+           CACAGCAAGTCTATAAAATAACGCCGCAAGCTCCCATTTTTGTCCAAAGGGAGAACACTT
JMFN004N14+                                                    GTCCAAAGGGAGAACACTT
                      ____________________________________________________________
consensus             CACAGCAAGTCTATAAAATAACGCCGCAAGCTCCCATTTTTGTCCAAAGGGAGAACACTT
 
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JMFN005B21+           ACTCAGCATGGGATTTTTTCTTGGTTGTGTATGGATAGTACTCCTTTCCATTGTCGACCC
JMFN017F20+           ACTCAGCATGGGATTTTTTCTTGGTTGTGTATGGATAGTACTCCTTTCCATTGTCGACCC
JMFN038L16+           ACTCAGCATGGGATTTTTTCTTGGTTGTGTATGGATAGTACTCCTTTCCATTGTCGACCC
JMFN004N14+           ACTCAGCATGGGATTTTTTCTTGGTTGTGTATGGATAGTACTCCTTTCCATTGTCGACCC
                      ____________________________________________________________
consensus             ACTCAGCATGGGATTTTTTCTTGGTTGTGTATGGATAGTACTCCTTTCCATTGTCGACCC
 
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JMFN005B21+           TCACGGTCTGACCTCCAGCGTCGATTATAGCTGAGGTAACTGCAAGTGCCGCTCCAGCAG
JMFN017F20+           TCACGGTCTGACCTCCAGCGTCGATTATAGCTGAGGTAACTGCAAGTGCCGCTCCAGCAG
JMFN038L16+           TCACGGTCTGACCTCCAGCGTCGATTATAGCTGAGGTAACTGCAAGTGCCGCTCCAGCAG
JMFN004N14+           TCACGGTCTGACCTCCAGCGTCGATTATAGCTGAGGTAACTGCAAGTGCCGCTCCAGCAG
                      ____________________________________________________________
consensus             TCACGGTCTGACCTCCAGCGTCGATTATAGCTGAGGTAACTGCAAGTGCCGCTCCAGCAG
 
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JMFN005B21+           AGATAGCAGTTGAAATGCTCTTACCTTTATAACCAAGCACAGAAGCACCGGCTGCAAATC
JMFN017F20+           AGATAGCAGTTGAAATGCTCTTACCTTTATAACCAAGCACAGAAGCACCGGCTGCAAATC
JMFN038L16+           AGATAGCAGTTGAAATGCTCTTACCTTTATAACCAAGCACAGAAGCACCGGCTGCAAATC
JMFN004N14+           AGATAGCAGTTGAAATGCTCTTACCTTTATAACCAAGCACAGAAGCACCGGCTGCAAATC
                      ____________________________________________________________
consensus             AGATAGCAGTTGAAATGCTCTTACCTTTATAACCAAGCACAGAAGCACCGGCTGCAAATC
 
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JMFN005B21+           CACCAACAGCACCATTAATAAAGTCCCTTTTCATACGATAATTCTGCATCAGCTGCTCTA
JMFN017F20+           CACCAACAGCACCATTAATAAAGTCCCTTTTCATACGATAATTCTGCATCAGCTGCTCTA
JMFN038L16+           CACCAACAGCACCATTAATAAAGTCCCTTTTCATACGATAATTCTGCATCAGCTGCTCTA
JMFN004N14+           CACCAACAGCACCATTAATAAAGTCCCTTTTCATACGATAATTCTGCATCAGCTGCTCTA
                      ____________________________________________________________
consensus             CACCAACAGCACCATTAATAAAGTCCCTTTTCATACGATAATTCTGCATCAGCTGCTCTA
 
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JMFN005B21+           CACCAATATACACTCCACCAATGGCAGCAAATGTCATCCCATAATTACCCATCATCTTCA
JMFN017F20+           CACCAATATACACTCCACCAATGGCAGCAAATGTCATCCCATAATTACCCATCATCTTCA
JMFN038L16+           CACCAATATACACTCCACCAATGGCAGCAAATGTCATCCCATAATTACCCATCATCTTCA
JMFN004N14+           CACCAATATACACTCCACCAATGGCAGCAAATGTCATCCCATAATTACCCATCATCTTCA
                      ____________________________________________________________
consensus             CACCAATATACACTCCACCAATGGCAGCAAATGTCATCCCATAATTACCCATCATCTTCA
 
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JMFN005B21+           GTGCTCGAACCAAGCCAGGAAGTGC                                   
JMFN017F20+           GTGCTCGAACCAAGCCAGGAAGTGCAACACTTCTCTCAACACGAGGCACATCATACCAAG
JMFN038L16+           GTGCTCGAACCAAGCCAGGAAGTGCAACACTTCTCTCAACACGAGGCACATCATACCAAG
JMFN004N14+           GTGCTCGAACCAAGCCAGGAAGTGCAACACTTCTCTCAACACGAGGCACATCATACCAAG
                      ____________________________________________________________
consensus             GTGCTCGAACCAAGCCAGGAAGTGCAACACTTCTCTCAACACGAGGCACATCATACCAAG
 
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JMFN017F20+           TAGCAACAATAGTACCCCAAAGAGCACCAGCAGCTAGACCTGTGGTTGCACCTTTTATTG
JMFN038L16+           TAGCAACAATAGTACCCCAAAGAGCACCAGCAGCTAGACCTGTGGTTGCACCTTTTATTG
JMFN004N14+           TAGCAACAATAGTACCCCAAAGAGCACCAGCAGCTAGACCTGTGGTTGCACCTTTTATTG
                      ____________________________________________________________
consensus             TAGCAACAATAGTACCCCAAAGAGCACCAGCAGCTAGACCTGTGGTTGCACCTTTTATTG
 
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JMFN017F20+           TTTTCATCATTGGAGTATCATCATCCTCGTAGTATCTGAGCTCTGAGGAGTCCATAGCTT
JMFN038L16+           TTTTCATCATTGGAGTATCATCATCCTCGTAGTATCTGAGCTCTGAGGAGTCCATAGCTT
JMFN004N14+           TTTTCATCATTGGAGTATCATCATCCTCGTAGTATCTGAGCTCTGAGGAGTCCATAGCTT
                      ____________________________________________________________
consensus             TTTTCATCATTGGAGTATCATCATCCTCGTAGTATCTGAGCTCTGAGGAGTCCATAGCTT
 
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JMFN017F20+           AACAAGAAACCACAATAACTGTACCGGGTGGGATTGAAGGAGTGGTAACTGATAC     
JMFN038L16+           AACAAGAAACCACAATAACTGTACCGGGTGGGATTGAAGGAGTGGTAACTGATACTGATC
JMFN004N14+           AACAAGAAACCACAATAACTGTACCGGGTGGGATTGAAGGAGTGGTAACTGATACTGATC
                      ____________________________________________________________
consensus             AACAAGAAACCACAATAACTGTACCGGGTGGGATTGAAGGAGTGGTAACTGATACTGATC
 
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JMFN038L16+           TGT                                                         
JMFN004N14+           TGTGTTGCCGGAGAGAGAGAGAGAGAGAGAGAGAGATTGGAATTTGGAAGCTCAGGAAGG
                      ____________________________________________________________
consensus             TGTGTTGCCGGAGAGAGAGAGAGAGAGAGAGAGAGATTGGAATTTGGAAGCTCAGGAAGG